RNA–Protein interactions for RNA: ENST00000518495.5

VDAC3-202, Transcript of voltage dependent anion channel 3, humanhuman

TSL 3

Gene VDAC3, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-202ENST00000518495 CHD6Q8TD26 2715 aa1.74□□□□□ -2.13
VDAC3-202ENST00000518495 TNRC18O15417 2968 aaPredicted RBP1.74□□□□□ -2.13
VDAC3-202ENST00000518495 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
VDAC3-202ENST00000518495 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
VDAC3-202ENST00000518495 TENM4Q6N022 2769 aa1.71□□□□□ -2.14
VDAC3-202ENST00000518495 LINC01556Q5JQF7 62 aa1.71□□□□□ -2.14
VDAC3-202ENST00000518495 KRTAP2-3P0C7H8 128 aa1.7□□□□□ -2.14
VDAC3-202ENST00000518495 KRTAP2-4Q9BYR9 128 aa1.7□□□□□ -2.14
VDAC3-202ENST00000518495 KRTAP2-1Q9BYU5 128 aa1.7□□□□□ -2.14
VDAC3-202ENST00000518495 ATRQ13535 2644 aa1.7□□□□□ -2.14
VDAC3-202ENST00000518495 NBPF19A0A087WUL8 3843 aa1.69□□□□□ -2.14
VDAC3-202ENST00000518495 MYCBP2O75592 4640 aa1.68□□□□□ -2.14
VDAC3-202ENST00000518495 SACSQ9NZJ4 4579 aa1.68□□□□□ -2.14
VDAC3-202ENST00000518495 CSMD3Q7Z407 3707 aa1.68□□□□□ -2.14
VDAC3-202ENST00000518495 COL6A3P12111 3177 aa1.67□□□□□ -2.14
VDAC3-202ENST00000518495 PRKDCP78527 4128 aaKnown RBP1.66□□□□□ -2.14
VDAC3-202ENST00000518495 AKAP9Q99996 3911 aa1.66□□□□□ -2.14
VDAC3-202ENST00000518495 EPG5Q9HCE0 2579 aa1.65□□□□□ -2.15
VDAC3-202ENST00000518495 BDP1A6H8Y1 2624 aa1.65□□□□□ -2.15
VDAC3-202ENST00000518495 USP24Q9UPU5 2620 aa1.65□□□□□ -2.15
VDAC3-202ENST00000518495 FRYQ5TBA9 3013 aa1.64□□□□□ -2.15
VDAC3-202ENST00000518495 A0A096LPF7 62 aa1.64□□□□□ -2.15
VDAC3-202ENST00000518495 RPS29P62273 56 aaKnown RBP1.64□□□□□ -2.15
VDAC3-202ENST00000518495 FAM186AA6NE01 2351 aa1.63□□□□□ -2.15
VDAC3-202ENST00000518495 FRYLO94915 3013 aa1.63□□□□□ -2.15
VDAC3-202ENST00000518495 CEP350Q5VT06 3117 aa1.62□□□□□ -2.15
VDAC3-202ENST00000518495 DYNC2H1Q8NCM8 4307 aaKnown RBP1.62□□□□□ -2.15
VDAC3-202ENST00000518495 NCOR2Q9Y618 2525 aa1.61□□□□□ -2.15
VDAC3-202ENST00000518495 SMR3AQ99954 134 aa1.61□□□□□ -2.15
VDAC3-202ENST00000518495 RANBP2P49792 3224 aaKnown RBP1.61□□□□□ -2.15
VDAC3-202ENST00000518495 PTPN13Q12923 2485 aa1.61□□□□□ -2.15
VDAC3-202ENST00000518495 DNAH8Q96JB1 4490 aa1.61□□□□□ -2.15
VDAC3-202ENST00000518495 ITPR3Q14573 2671 aa1.61□□□□□ -2.15
VDAC3-202ENST00000518495 LRRK2Q5S007 2527 aa1.61□□□□□ -2.15
VDAC3-202ENST00000518495 USP9YO00507 2555 aaPredicted RBP1.6□□□□□ -2.15
VDAC3-202ENST00000518495 CHD8Q9HCK8 2581 aa1.6□□□□□ -2.15
VDAC3-202ENST00000518495 VPS13BQ7Z7G8 4022 aa1.6□□□□□ -2.15
VDAC3-202ENST00000518495 RIF1Q5UIP0 2472 aaKnown RBP1.6□□□□□ -2.15
VDAC3-202ENST00000518495 PIEZO1Q92508 2521 aa1.6□□□□□ -2.15
VDAC3-202ENST00000518495 APCP25054 2843 aa1.6□□□□□ -2.15
VDAC3-202ENST00000518495 DEFB133Q30KQ1 61 aa1.59□□□□□ -2.15
VDAC3-202ENST00000518495 BSNQ9UPA5 3926 aa1.59□□□□□ -2.16
VDAC3-202ENST00000518495 KMT2AQ03164 3969 aa1.59□□□□□ -2.16
VDAC3-202ENST00000518495 ZFHX4Q86UP3 3567 aa1.58□□□□□ -2.16
VDAC3-202ENST00000518495 CFAP54Q96N23 3096 aa1.58□□□□□ -2.16
VDAC3-202ENST00000518495 NBEAQ8NFP9 2946 aa1.58□□□□□ -2.16
VDAC3-202ENST00000518495 ANK2Q01484 3957 aa1.57□□□□□ -2.16
VDAC3-202ENST00000518495 DCHS2Q6V1P9 2916 aa1.57□□□□□ -2.16
VDAC3-202ENST00000518495 LYSTQ99698 3801 aa1.57□□□□□ -2.16
VDAC3-202ENST00000518495 HELZ2Q9BYK8 2649 aaKnown RBP1.57□□□□□ -2.16
VDAC3-202ENST00000518495 ITPR1Q14643 2758 aa1.56□□□□□ -2.16
VDAC3-202ENST00000518495 PDZD2O15018 2839 aa1.56□□□□□ -2.16
VDAC3-202ENST00000518495 DNAH3Q8TD57 4116 aa1.56□□□□□ -2.16
VDAC3-202ENST00000518495 KRTAP8-1Q8IUC2 63 aa1.56□□□□□ -2.16
VDAC3-202ENST00000518495 FLNCQ14315 2725 aa1.56□□□□□ -2.16
VDAC3-202ENST00000518495 DNAH2Q9P225 4427 aa1.56□□□□□ -2.16
VDAC3-202ENST00000518495 NF1P21359 2839 aa1.55□□□□□ -2.16
VDAC3-202ENST00000518495 HIVEP3Q5T1R4 2406 aa1.55□□□□□ -2.16
VDAC3-202ENST00000518495 CACNA1AO00555 2505 aa1.55□□□□□ -2.16
VDAC3-202ENST00000518495 CD52P31358 61 aa1.55□□□□□ -2.16
VDAC3-202ENST00000518495 PRUNE2Q8WUY3 3088 aa1.55□□□□□ -2.16
VDAC3-202ENST00000518495 MAP1AP78559 2803 aaPredicted RBP1.54□□□□□ -2.16
VDAC3-202ENST00000518495 DNAH7Q8WXX0 4024 aa1.54□□□□□ -2.16
VDAC3-202ENST00000518495 ANK3Q12955 4377 aaKnown RBP1.54□□□□□ -2.16
VDAC3-202ENST00000518495 COL12A1Q99715 3063 aa1.54□□□□□ -2.16
VDAC3-202ENST00000518495 ANKHD1Q8IWZ3 2542 aaKnown RBP1.53□□□□□ -2.16
VDAC3-202ENST00000518495 LRBAP50851 2863 aa1.53□□□□□ -2.17
VDAC3-202ENST00000518495 MTORP42345 2549 aa1.52□□□□□ -2.17
VDAC3-202ENST00000518495 TRIOO75962 3097 aa1.52□□□□□ -2.17
VDAC3-202ENST00000518495 ZNF469Q96JG9 3925 aaPredicted RBP1.52□□□□□ -2.17
VDAC3-202ENST00000518495 FAT2Q9NYQ8 4349 aa1.52□□□□□ -2.17
VDAC3-202ENST00000518495 COL7A1Q02388 2944 aa1.51□□□□□ -2.17
VDAC3-202ENST00000518495 U3KQA8 63 aa1.51□□□□□ -2.17
VDAC3-202ENST00000518495 SRCAPQ6ZRS2 3230 aa1.51□□□□□ -2.17
VDAC3-202ENST00000518495 GCN1Q92616 2671 aaKnown RBP1.51□□□□□ -2.17
VDAC3-202ENST00000518495 PKHD1L1Q86WI1 4243 aa1.5□□□□□ -2.17
VDAC3-202ENST00000518495 ATMQ13315 3056 aa1.5□□□□□ -2.17
VDAC3-202ENST00000518495 KRTAP5-8O75690 187 aa1.5□□□□□ -2.17
VDAC3-202ENST00000518495 UTP20O75691 2785 aaKnown RBP1.5□□□□□ -2.17
VDAC3-202ENST00000518495 TNXBP22105 4242 aa1.5□□□□□ -2.17
VDAC3-202ENST00000518495 SETXQ7Z333 2677 aaKnown RBP1.5□□□□□ -2.17
VDAC3-202ENST00000518495 SONP18583 2426 aaKnown RBP1.49□□□□□ -2.17
VDAC3-202ENST00000518495 DNAH10Q8IVF4 4471 aa1.49□□□□□ -2.17
VDAC3-202ENST00000518495 FBN2P35556 2912 aa1.49□□□□□ -2.17
VDAC3-202ENST00000518495 ACANP16112 2415 aa1.49□□□□□ -2.17
VDAC3-202ENST00000518495 NSD1Q96L73 2696 aaPredicted RBP1.49□□□□□ -2.17
VDAC3-202ENST00000518495 C5orf42Q9H799 3197 aa1.49□□□□□ -2.17
VDAC3-202ENST00000518495 HTTP42858 3142 aa1.48□□□□□ -2.17
VDAC3-202ENST00000518495 RELNP78509 3460 aa1.48□□□□□ -2.17
VDAC3-202ENST00000518495 BOD1L1Q8NFC6 3051 aa1.47□□□□□ -2.17
VDAC3-202ENST00000518495 NIPBLQ6KC79 2804 aaeCLIP1.47□□□□□ -2.17
VDAC3-202ENST00000518495 DMXL2Q8TDJ6 3036 aa1.47□□□□□ -2.17
VDAC3-202ENST00000518495 FLGP20930 4061 aaPredicted RBP1.46□□□□□ -2.18
VDAC3-202ENST00000518495 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
VDAC3-202ENST00000518495 SPENQ96T58 3664 aaKnown RBP1.45□□□□□ -2.18
VDAC3-202ENST00000518495 DNAH1Q9P2D7 4330 aa1.45□□□□□ -2.18
VDAC3-202ENST00000518495 DNAH12Q6ZR08 3092 aa1.45□□□□□ -2.18
VDAC3-202ENST00000518495 PKD1P98161 4303 aa1.45□□□□□ -2.18
VDAC3-202ENST00000518495 SPG11Q96JI7 2443 aa1.45□□□□□ -2.18
VDAC3-202ENST00000518495 ZZEF1O43149 2961 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms