RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 NBEAL1Q6ZS30 2694 aa7.53□□□□□ -1.2
PCDHGA6-201ENST00000517434 Q8NDZ9 215 aa7.52□□□□□ -1.2
PCDHGA6-201ENST00000517434 SEC61BP60468 96 aaKnown RBP7.51□□□□□ -1.21
PCDHGA6-201ENST00000517434 SPRR1AP35321 89 aa7.51□□□□□ -1.21
PCDHGA6-201ENST00000517434 LINC00472Q9H8W2 130 aa7.51□□□□□ -1.21
PCDHGA6-201ENST00000517434 Q5VSD8 79 aa7.51□□□□□ -1.21
PCDHGA6-201ENST00000517434 A6NN06 94 aa7.49□□□□□ -1.21
PCDHGA6-201ENST00000517434 ZCCHC13Q8WW36 166 aaKnown RBP7.48□□□□□ -1.21
PCDHGA6-201ENST00000517434 KRTAP16-1A8MUX0 517 aa7.47□□□□□ -1.21
PCDHGA6-201ENST00000517434 M0R2T5 61 aa7.46□□□□□ -1.22
PCDHGA6-201ENST00000517434 LINC00483Q53H64 154 aa7.45□□□□□ -1.22
PCDHGA6-201ENST00000517434 NSD1Q96L73 2696 aaPredicted RBP7.45□□□□□ -1.22
PCDHGA6-201ENST00000517434 SPRR1BP22528 89 aa7.45□□□□□ -1.22
PCDHGA6-201ENST00000517434 Q5W150 140 aa7.45□□□□□ -1.22
PCDHGA6-201ENST00000517434 ROMO1P60602 79 aa7.44□□□□□ -1.22
PCDHGA6-201ENST00000517434 NIPBLQ6KC79 2804 aaeCLIP7.44□□□□□ -1.22
PCDHGA6-201ENST00000517434 FLG2Q5D862 2391 aaPredicted RBP7.43□□□□□ -1.22
PCDHGA6-201ENST00000517434 Q6ZR54 194 aa7.43□□□□□ -1.22
PCDHGA6-201ENST00000517434 SPATA8Q6RVD6 105 aa7.41□□□□□ -1.22
PCDHGA6-201ENST00000517434 KRTAP1-5Q9BYS1 174 aa7.4□□□□□ -1.22
PCDHGA6-201ENST00000517434 KRTAP10-1P60331 282 aa7.4□□□□□ -1.22
PCDHGA6-201ENST00000517434 RPL37P61927 97 aaKnown RBP7.4□□□□□ -1.22
PCDHGA6-201ENST00000517434 KRTAP29-1A8MX34 341 aaPredicted RBP7.37□□□□□ -1.23
PCDHGA6-201ENST00000517434 CAMK2N1Q7Z7J9 78 aa7.37□□□□□ -1.23
PCDHGA6-201ENST00000517434 HIVEP1P15822 2718 aa7.35□□□□□ -1.23
PCDHGA6-201ENST00000517434 KRTAP26-1Q6PEX3 210 aa7.34□□□□□ -1.23
PCDHGA6-201ENST00000517434 KRTAP10-2P60368 255 aa7.34□□□□□ -1.23
PCDHGA6-201ENST00000517434 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
PCDHGA6-201ENST00000517434 KRTAP25-1Q3LHN0 102 aa7.31□□□□□ -1.24
PCDHGA6-201ENST00000517434 TENM4Q6N022 2769 aa7.3□□□□□ -1.24
PCDHGA6-201ENST00000517434 DMBT1Q9UGM3 2413 aaPredicted RBP7.29□□□□□ -1.24
PCDHGA6-201ENST00000517434 NBPF19A0A087WUL8 3843 aa7.28□□□□□ -1.24
PCDHGA6-201ENST00000517434 ADM2Q7Z4H4 148 aa7.25□□□□□ -1.25
PCDHGA6-201ENST00000517434 A0A087X002 238 aa7.25□□□□□ -1.25
PCDHGA6-201ENST00000517434 A8MU10 97 aa7.24□□□□□ -1.25
PCDHGA6-201ENST00000517434 KMT2BQ9UMN6 2715 aaPredicted RBP7.24□□□□□ -1.25
PCDHGA6-201ENST00000517434 VWFP04275 2813 aa7.22□□□□□ -1.25
PCDHGA6-201ENST00000517434 S4R3F8 94 aa7.22□□□□□ -1.25
PCDHGA6-201ENST00000517434 ZNF469Q96JG9 3925 aaPredicted RBP7.22□□□□□ -1.25
PCDHGA6-201ENST00000517434 STAB2Q8WWQ8 2551 aa7.22□□□□□ -1.25
PCDHGA6-201ENST00000517434 KRTAP4-16G5E9R7 235 aaPredicted RBP7.2□□□□□ -1.26
PCDHGA6-201ENST00000517434 RPS29P62273 56 aaKnown RBP7.2□□□□□ -1.26
PCDHGA6-201ENST00000517434 PDZD2O15018 2839 aa7.2□□□□□ -1.26
PCDHGA6-201ENST00000517434 NDUFAF8A1L188 74 aa7.2□□□□□ -1.26
PCDHGA6-201ENST00000517434 TENM1Q9UKZ4 2725 aa7.18□□□□□ -1.26
PCDHGA6-201ENST00000517434 R4GN34 69 aa7.16□□□□□ -1.26
PCDHGA6-201ENST00000517434 Q6ZRN7 208 aaPredicted RBP7.15□□□□□ -1.26
PCDHGA6-201ENST00000517434 OTOGQ6ZRI0 2925 aa7.15□□□□□ -1.27
PCDHGA6-201ENST00000517434 PANO1I0J062 215 aa7.11□□□□□ -1.27
PCDHGA6-201ENST00000517434 NOTCH2NLQ7Z3S9 236 aa7.02□□□□□ -1.29
PCDHGA6-201ENST00000517434 AKAP9Q99996 3911 aa7.02□□□□□ -1.29
PCDHGA6-201ENST00000517434 M0QZ58 72 aa7.02□□□□□ -1.29
PCDHGA6-201ENST00000517434 A8MUU9 505 aa7□□□□□ -1.29
PCDHGA6-201ENST00000517434 TENM3Q9P273 2699 aa6.99□□□□□ -1.29
PCDHGA6-201ENST00000517434 TRRAPQ9Y4A5 3859 aa6.99□□□□□ -1.29
PCDHGA6-201ENST00000517434 ANK3Q12955 4377 aaKnown RBP6.99□□□□□ -1.29
PCDHGA6-201ENST00000517434 KRTAP11-1Q8IUC1 163 aa6.98□□□□□ -1.29
PCDHGA6-201ENST00000517434 PKD1L1Q8TDX9 2849 aa6.97□□□□□ -1.29
PCDHGA6-201ENST00000517434 PLAC4Q8WY50 150 aa6.96□□□□□ -1.3
PCDHGA6-201ENST00000517434 FBN1P35555 2871 aaKnown RBP6.96□□□□□ -1.3
PCDHGA6-201ENST00000517434 C20orf166-AS1Q96NR2 134 aa6.94□□□□□ -1.3
PCDHGA6-201ENST00000517434 KRTAP13-1Q8IUC0 172 aa6.88□□□□□ -1.31
PCDHGA6-201ENST00000517434 KRTAP13-2Q52LG2 175 aa6.85□□□□□ -1.31
PCDHGA6-201ENST00000517434 KRTAP7-1Q8IUC3 87 aa6.82□□□□□ -1.32
PCDHGA6-201ENST00000517434 TENM2Q9NT68 2774 aa6.7□□□□□ -1.34
PCDHGA6-201ENST00000517434 P0C880 135 aa6.67□□□□□ -1.34
PCDHGA6-201ENST00000517434 C10orf95Q9H7T3 257 aa6.67□□□□□ -1.34
PCDHGA6-201ENST00000517434 H0YAA0 97 aa6.65□□□□□ -1.34
PCDHGA6-201ENST00000517434 PP632Q6XCG6 107 aa6.65□□□□□ -1.34
PCDHGA6-201ENST00000517434 TPRXLQ17RH7 258 aa6.65□□□□□ -1.35
PCDHGA6-201ENST00000517434 TNP1P09430 55 aa6.61□□□□□ -1.35
PCDHGA6-201ENST00000517434 KRTAP1-4P0C5Y4 121 aa6.6□□□□□ -1.35
PCDHGA6-201ENST00000517434 XP32Q5T750 250 aa6.56□□□□□ -1.36
PCDHGA6-201ENST00000517434 SRRM2Q9UQ35 2752 aaKnown RBP6.54□□□□□ -1.36
PCDHGA6-201ENST00000517434 CSMD3Q7Z407 3707 aa6.49□□□□□ -1.37
PCDHGA6-201ENST00000517434 A0A1B0GVY2 172 aa6.49□□□□□ -1.37
PCDHGA6-201ENST00000517434 TGP01266 2768 aa6.48□□□□□ -1.37
PCDHGA6-201ENST00000517434 ANK2Q01484 3957 aa6.45□□□□□ -1.38
PCDHGA6-201ENST00000517434 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
PCDHGA6-201ENST00000517434 KRTAP13-3Q3SY46 172 aa6.41□□□□□ -1.38
PCDHGA6-201ENST00000517434 COL7A1Q02388 2944 aa6.4□□□□□ -1.38
PCDHGA6-201ENST00000517434 HUWE1Q7Z6Z7 4374 aaKnown RBP6.38□□□□□ -1.39
PCDHGA6-201ENST00000517434 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
PCDHGA6-201ENST00000517434 KRTAP10-10P60014 251 aa6.33□□□□□ -1.4
PCDHGA6-201ENST00000517434 DNAH10Q8IVF4 4471 aa6.3□□□□□ -1.4
PCDHGA6-201ENST00000517434 FBN3Q75N90 2809 aa6.25□□□□□ -1.41
PCDHGA6-201ENST00000517434 MEGF8Q7Z7M0 2845 aa6.24□□□□□ -1.41
PCDHGA6-201ENST00000517434 LYSTQ99698 3801 aa6.23□□□□□ -1.41
PCDHGA6-201ENST00000517434 CMYA5Q8N3K9 4069 aa6.23□□□□□ -1.41
PCDHGA6-201ENST00000517434 DNAH9Q9NYC9 4486 aa6.19□□□□□ -1.42
PCDHGA6-201ENST00000517434 DNAH3Q8TD57 4116 aa6.17□□□□□ -1.42
PCDHGA6-201ENST00000517434 PLECQ15149 4684 aaKnown RBP6.16□□□□□ -1.42
PCDHGA6-201ENST00000517434 KRTAP12-2P59991 146 aa6.11□□□□□ -1.43
PCDHGA6-201ENST00000517434 DNAH7Q8WXX0 4024 aa6.07□□□□□ -1.44
PCDHGA6-201ENST00000517434 DNAH1Q9P2D7 4330 aa6.06□□□□□ -1.44
PCDHGA6-201ENST00000517434 STARD9Q9P2P6 4700 aa6.05□□□□□ -1.44
PCDHGA6-201ENST00000517434 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
PCDHGA6-201ENST00000517434 PRKDCP78527 4128 aaKnown RBP6.03□□□□□ -1.44
PCDHGA6-201ENST00000517434 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
PCDHGA6-201ENST00000517434 KMT2AQ03164 3969 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms