RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 KRTAP17-1Q9BYP8 105 aa3.1□□□□□ -1.91
SCARNA20.4-201ENST00000516969 C8orf17Q9NRJ1 99 aa3.1□□□□□ -1.91
SCARNA20.4-201ENST00000516969 TNXBP22105 4242 aa3.1□□□□□ -1.91
SCARNA20.4-201ENST00000516969 DMBT1Q9UGM3 2413 aaPredicted RBP3.09□□□□□ -1.91
SCARNA20.4-201ENST00000516969 hDV103S1A0JD37 113 aa3.09□□□□□ -1.91
SCARNA20.4-201ENST00000516969 KLKP1Q107X0 134 aa3.09□□□□□ -1.91
SCARNA20.4-201ENST00000516969 Q5VSD8 79 aa3.09□□□□□ -1.91
SCARNA20.4-201ENST00000516969 NOTCH2NLQ7Z3S9 236 aa3.09□□□□□ -1.91
SCARNA20.4-201ENST00000516969 LINC00304Q8N9R0 145 aa3.09□□□□□ -1.91
SCARNA20.4-201ENST00000516969 LIMD2Q9BT23 127 aa3.09□□□□□ -1.91
SCARNA20.4-201ENST00000516969 CYSTM1Q9H1C7 97 aa3.09□□□□□ -1.91
SCARNA20.4-201ENST00000516969 IGHV6-1A0A0B4J1U7 121 aa3.08□□□□□ -1.92
SCARNA20.4-201ENST00000516969 C5orf47Q569G3 176 aa3.08□□□□□ -1.92
SCARNA20.4-201ENST00000516969 A0A0U1RQV1 116 aa3.07□□□□□ -1.92
SCARNA20.4-201ENST00000516969 C8orf87E5RJ46 101 aa3.07□□□□□ -1.92
SCARNA20.4-201ENST00000516969 KRTAP10-8P60410 259 aa3.07□□□□□ -1.92
SCARNA20.4-201ENST00000516969 C20orf197Q8N268 126 aa3.07□□□□□ -1.92
SCARNA20.4-201ENST00000516969 TMEM254Q8TBM7 123 aa3.07□□□□□ -1.92
SCARNA20.4-201ENST00000516969 RYR1P21817 5038 aa3.06□□□□□ -1.92
SCARNA20.4-201ENST00000516969 LINC00313P59037 77 aa3.06□□□□□ -1.92
SCARNA20.4-201ENST00000516969 Q8N1X5 172 aa3.06□□□□□ -1.92
SCARNA20.4-201ENST00000516969 ZCCHC13Q8WW36 166 aaKnown RBP3.06□□□□□ -1.92
SCARNA20.4-201ENST00000516969 MRPL34Q9BQ48 92 aaKnown RBP3.06□□□□□ -1.92
SCARNA20.4-201ENST00000516969 H7BZZ5 65 aa3.05□□□□□ -1.92
SCARNA20.4-201ENST00000516969 TP53AIP1Q9HCN2 124 aa3.05□□□□□ -1.92
SCARNA20.4-201ENST00000516969 SNURFQ9Y675 71 aa3.05□□□□□ -1.92
SCARNA20.4-201ENST00000516969 LRP1Q07954 4544 aaKnown RBP3.05□□□□□ -1.92
SCARNA20.4-201ENST00000516969 KRTAP16-1A8MUX0 517 aa3.04□□□□□ -1.92
SCARNA20.4-201ENST00000516969 H3BPC8 53 aa3.04□□□□□ -1.92
SCARNA20.4-201ENST00000516969 NDUFC1O43677 76 aa3.04□□□□□ -1.92
SCARNA20.4-201ENST00000516969 Q8N9P0 234 aaPredicted RBP3.04□□□□□ -1.92
SCARNA20.4-201ENST00000516969 TMEM258P61165 79 aa3.03□□□□□ -1.92
SCARNA20.4-201ENST00000516969 FAT3Q8TDW7 4589 aa3.03□□□□□ -1.92
SCARNA20.4-201ENST00000516969 KIAA1109Q2LD37 5005 aa3.02□□□□□ -1.93
SCARNA20.4-201ENST00000516969 TRAV22A0A0B4J277 110 aa3.02□□□□□ -1.93
SCARNA20.4-201ENST00000516969 H0Y9P7 68 aa3.02□□□□□ -1.93
SCARNA20.4-201ENST00000516969 MP68P56378 58 aa3.02□□□□□ -1.93
SCARNA20.4-201ENST00000516969 KRTAP13-3Q3SY46 172 aa3.02□□□□□ -1.93
SCARNA20.4-201ENST00000516969 EPPK1P58107 5090 aaKnown RBP3.01□□□□□ -1.93
SCARNA20.4-201ENST00000516969 MT1HL1P0DM35 61 aa3.01□□□□□ -1.93
SCARNA20.4-201ENST00000516969 NDUFS5O43920 106 aa3□□□□□ -1.93
SCARNA20.4-201ENST00000516969 Q5W150 140 aa3□□□□□ -1.93
SCARNA20.4-201ENST00000516969 C1orf64Q8NEQ6 169 aa3□□□□□ -1.93
SCARNA20.4-201ENST00000516969 LINC00208Q96KT6 92 aa3□□□□□ -1.93
SCARNA20.4-201ENST00000516969 OXTP01178 125 aa2.99□□□□□ -1.93
SCARNA20.4-201ENST00000516969 KRTAP4-5Q9BYR2 181 aa2.99□□□□□ -1.93
SCARNA20.4-201ENST00000516969 MYCBP2O75592 4640 aa2.99□□□□□ -1.93
SCARNA20.4-201ENST00000516969 FAM236DA0A1B0GTK5 79 aa2.98□□□□□ -1.93
SCARNA20.4-201ENST00000516969 FAM236CP0DP71 79 aa2.98□□□□□ -1.93
SCARNA20.4-201ENST00000516969 ATP5EP56381 51 aaPredicted RBP2.98□□□□□ -1.93
SCARNA20.4-201ENST00000516969 RPS28P62857 69 aaKnown RBP2.98□□□□□ -1.93
SCARNA20.4-201ENST00000516969 A8MUU9 505 aa2.97□□□□□ -1.93
SCARNA20.4-201ENST00000516969 FP248Q71RG6 208 aaPredicted RBP2.97□□□□□ -1.93
SCARNA20.4-201ENST00000516969 C20orf166-AS1Q96NR2 134 aa2.97□□□□□ -1.93
SCARNA20.4-201ENST00000516969 RETNLBQ9BQ08 111 aa2.97□□□□□ -1.93
SCARNA20.4-201ENST00000516969 LOC101927531A0A1B0GV80 90 aa2.96□□□□□ -1.94
SCARNA20.4-201ENST00000516969 SPANXA2-OT1Q8N9U9 137 aa2.96□□□□□ -1.94
SCARNA20.4-201ENST00000516969 CYP4F30PQ9H0H9 118 aa2.96□□□□□ -1.94
SCARNA20.4-201ENST00000516969 C9orf92A6NGG3 77 aa2.95□□□□□ -1.94
SCARNA20.4-201ENST00000516969 IGLV7-46A0A075B6I9 117 aa2.94□□□□□ -1.94
SCARNA20.4-201ENST00000516969 IGKV2-30P06310 120 aa2.94□□□□□ -1.94
SCARNA20.4-201ENST00000516969 Q75L30 129 aa2.94□□□□□ -1.94
SCARNA20.4-201ENST00000516969 SERP1Q9Y6X1 66 aa2.94□□□□□ -1.94
SCARNA20.4-201ENST00000516969 PCOTHQ58A44 107 aa2.93□□□□□ -1.94
SCARNA20.4-201ENST00000516969 PRR4Q16378 134 aa2.9□□□□□ -1.95
SCARNA20.4-201ENST00000516969 IGKV2D-30A0A075B6S6 120 aa2.89□□□□□ -1.95
SCARNA20.4-201ENST00000516969 HRES1P13985 223 aa2.89□□□□□ -1.95
SCARNA20.4-201ENST00000516969 XP32Q5T750 250 aa2.89□□□□□ -1.95
SCARNA20.4-201ENST00000516969 BIRC6Q9NR09 4857 aa2.89□□□□□ -1.95
SCARNA20.4-201ENST00000516969 RPL37P61927 97 aaKnown RBP2.88□□□□□ -1.95
SCARNA20.4-201ENST00000516969 TPRXLQ17RH7 258 aa2.88□□□□□ -1.95
SCARNA20.4-201ENST00000516969 C7orf65Q6ZTY9 151 aa2.88□□□□□ -1.95
SCARNA20.4-201ENST00000516969 HERC2O95714 4834 aa2.88□□□□□ -1.95
SCARNA20.4-201ENST00000516969 DMAC1Q96GE9 116 aa2.87□□□□□ -1.95
SCARNA20.4-201ENST00000516969 SMIM26A0A096LP01 95 aa2.86□□□□□ -1.95
SCARNA20.4-201ENST00000516969 SPINK7P58062 85 aa2.86□□□□□ -1.95
SCARNA20.4-201ENST00000516969 ATP11AUNQ6ZP68 121 aa2.86□□□□□ -1.95
SCARNA20.4-201ENST00000516969 ABCA13Q86UQ4 5058 aa2.86□□□□□ -1.95
SCARNA20.4-201ENST00000516969 J3QL48 77 aa2.85□□□□□ -1.95
SCARNA20.4-201ENST00000516969 ACYP2P14621 99 aa2.85□□□□□ -1.95
SCARNA20.4-201ENST00000516969 COA5Q86WW8 74 aa2.85□□□□□ -1.95
SCARNA20.4-201ENST00000516969 LRP2P98164 4655 aa2.83□□□□□ -1.96
SCARNA20.4-201ENST00000516969 A8MUN3 132 aa2.83□□□□□ -1.96
SCARNA20.4-201ENST00000516969 LPAP08519 4548 aa2.83□□□□□ -1.96
SCARNA20.4-201ENST00000516969 C4orf26Q17RF5 130 aa2.82□□□□□ -1.96
SCARNA20.4-201ENST00000516969 Q1T7F1 81 aa2.82□□□□□ -1.96
SCARNA20.4-201ENST00000516969 KRTAP3-1Q9BYR8 98 aa2.82□□□□□ -1.96
SCARNA20.4-201ENST00000516969 COX6B2Q6YFQ2 88 aa2.8□□□□□ -1.96
SCARNA20.4-201ENST00000516969 MPLKIPQ8TAP9 179 aa2.79□□□□□ -1.96
SCARNA20.4-201ENST00000516969 V9GYY9 64 aa2.79□□□□□ -1.96
SCARNA20.4-201ENST00000516969 CHKB-CPT1BH3BT56 60 aa2.77□□□□□ -1.97
SCARNA20.4-201ENST00000516969 SEC61BP60468 96 aaKnown RBP2.77□□□□□ -1.97
SCARNA20.4-201ENST00000516969 LINC01558Q9Y6Z2 57 aa2.77□□□□□ -1.97
SCARNA20.4-201ENST00000516969 PCLOQ9Y6V0 5065 aa2.74□□□□□ -1.97
SCARNA20.4-201ENST00000516969 KRTAP4-1Q9BYQ7 146 aa2.74□□□□□ -1.97
SCARNA20.4-201ENST00000516969 MUC17Q685J3 4493 aa2.74□□□□□ -1.97
SCARNA20.4-201ENST00000516969 PSPHP1O15172 72 aa2.73□□□□□ -1.97
SCARNA20.4-201ENST00000516969 Q5VV11 94 aa2.73□□□□□ -1.97
SCARNA20.4-201ENST00000516969 H1FX-AS1Q4G0G2 97 aa2.72□□□□□ -1.97
SCARNA20.4-201ENST00000516969 SPTSSBQ8NFR3 76 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms