RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 A0A087X002 238 aa8.58□□□□□ -1.04
TRIO-222ENST00000515144 R4GN34 69 aa8.58□□□□□ -1.04
TRIO-222ENST00000515144 A0A1B0GU33 70 aa8.58□□□□□ -1.04
TRIO-222ENST00000515144 KRTAP26-1Q6PEX3 210 aa8.57□□□□□ -1.04
TRIO-222ENST00000515144 OCR1Q9BZK8 76 aa8.56□□□□□ -1.04
TRIO-222ENST00000515144 MMP24-AS1A0A0U1RRL7 71 aa8.55□□□□□ -1.04
TRIO-222ENST00000515144 Q5W150 140 aa8.55□□□□□ -1.04
TRIO-222ENST00000515144 LUZP6Q538Z0 58 aa8.55□□□□□ -1.04
TRIO-222ENST00000515144 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
TRIO-222ENST00000515144 SPRR1AP35321 89 aa8.55□□□□□ -1.04
TRIO-222ENST00000515144 TENM4Q6N022 2769 aa8.54□□□□□ -1.04
TRIO-222ENST00000515144 TENM1Q9UKZ4 2725 aa8.52□□□□□ -1.05
TRIO-222ENST00000515144 VPS13CQ709C8 3753 aa8.52□□□□□ -1.05
TRIO-222ENST00000515144 OXTP01178 125 aa8.51□□□□□ -1.05
TRIO-222ENST00000515144 Q6ZR54 194 aa8.5□□□□□ -1.05
TRIO-222ENST00000515144 LINC00472Q9H8W2 130 aa8.46□□□□□ -1.05
TRIO-222ENST00000515144 M0QZ58 72 aa8.43□□□□□ -1.06
TRIO-222ENST00000515144 LCA10Q71F78 164 aa8.42□□□□□ -1.06
TRIO-222ENST00000515144 KRTAP11-1Q8IUC1 163 aa8.42□□□□□ -1.06
TRIO-222ENST00000515144 ADM2Q7Z4H4 148 aa8.41□□□□□ -1.06
TRIO-222ENST00000515144 Q1T7F1 81 aa8.37□□□□□ -1.07
TRIO-222ENST00000515144 PKD1L1Q8TDX9 2849 aa8.36□□□□□ -1.07
TRIO-222ENST00000515144 FP248Q71RG6 208 aaPredicted RBP8.35□□□□□ -1.07
TRIO-222ENST00000515144 DMAC1Q96GE9 116 aa8.35□□□□□ -1.07
TRIO-222ENST00000515144 SPRR1BP22528 89 aa8.35□□□□□ -1.07
TRIO-222ENST00000515144 Q6ZRN7 208 aaPredicted RBP8.31□□□□□ -1.08
TRIO-222ENST00000515144 NOTCH2NLQ7Z3S9 236 aa8.3□□□□□ -1.08
TRIO-222ENST00000515144 MXRA5Q9NR99 2828 aa8.3□□□□□ -1.08
TRIO-222ENST00000515144 KTN1-AS1Q86SY8 53 aa8.29□□□□□ -1.08
TRIO-222ENST00000515144 VWFP04275 2813 aa8.28□□□□□ -1.08
TRIO-222ENST00000515144 SPATA8Q6RVD6 105 aa8.27□□□□□ -1.09
TRIO-222ENST00000515144 KRTAP4-16G5E9R7 235 aaPredicted RBP8.25□□□□□ -1.09
TRIO-222ENST00000515144 CYSTM1Q9H1C7 97 aa8.25□□□□□ -1.09
TRIO-222ENST00000515144 TRRAPQ9Y4A5 3859 aa8.23□□□□□ -1.09
TRIO-222ENST00000515144 KRTAP21-3Q3LHN1 58 aa8.22□□□□□ -1.09
TRIO-222ENST00000515144 C20orf166-AS1Q96NR2 134 aa8.18□□□□□ -1.1
TRIO-222ENST00000515144 Q75L30 129 aa8.18□□□□□ -1.1
TRIO-222ENST00000515144 KRTAP13-2Q52LG2 175 aa8.16□□□□□ -1.1
TRIO-222ENST00000515144 H1FX-AS1Q4G0G2 97 aa8.15□□□□□ -1.11
TRIO-222ENST00000515144 KRTAP7-1Q8IUC3 87 aa8.14□□□□□ -1.11
TRIO-222ENST00000515144 P0C880 135 aa8.13□□□□□ -1.11
TRIO-222ENST00000515144 PRAC1Q96KF2 57 aa8.13□□□□□ -1.11
TRIO-222ENST00000515144 A8MUU9 505 aa8.12□□□□□ -1.11
TRIO-222ENST00000515144 TENM2Q9NT68 2774 aa8.12□□□□□ -1.11
TRIO-222ENST00000515144 RPL37P61927 97 aaKnown RBP8.11□□□□□ -1.11
TRIO-222ENST00000515144 LINC01558Q9Y6Z2 57 aa8.11□□□□□ -1.11
TRIO-222ENST00000515144 A0A1B0GVY2 172 aa8.09□□□□□ -1.11
TRIO-222ENST00000515144 Q5VV11 94 aa8.06□□□□□ -1.12
TRIO-222ENST00000515144 ZNF469Q96JG9 3925 aaPredicted RBP8.06□□□□□ -1.12
TRIO-222ENST00000515144 PDZD2O15018 2839 aa8.06□□□□□ -1.12
TRIO-222ENST00000515144 TENM3Q9P273 2699 aa8.05□□□□□ -1.12
TRIO-222ENST00000515144 A0A0A0MQY5 61 aa8.03□□□□□ -1.12
TRIO-222ENST00000515144 ROMO1P60602 79 aa8.03□□□□□ -1.12
TRIO-222ENST00000515144 CSMD3Q7Z407 3707 aa8□□□□□ -1.13
TRIO-222ENST00000515144 AKAP9Q99996 3911 aa8□□□□□ -1.13
TRIO-222ENST00000515144 FBN1P35555 2871 aaKnown RBP8□□□□□ -1.13
TRIO-222ENST00000515144 RPS29P62273 56 aaKnown RBP7.96□□□□□ -1.13
TRIO-222ENST00000515144 A8MU10 97 aa7.96□□□□□ -1.14
TRIO-222ENST00000515144 KRTAP29-1A8MX34 341 aaPredicted RBP7.95□□□□□ -1.14
TRIO-222ENST00000515144 COL7A1Q02388 2944 aa7.93□□□□□ -1.14
TRIO-222ENST00000515144 TGP01266 2768 aa7.93□□□□□ -1.14
TRIO-222ENST00000515144 ASB16-AS1Q495Z4 193 aa7.93□□□□□ -1.14
TRIO-222ENST00000515144 KRTAP13-1Q8IUC0 172 aa7.92□□□□□ -1.14
TRIO-222ENST00000515144 Q5XG85 94 aa7.91□□□□□ -1.14
TRIO-222ENST00000515144 KRTAP10-8P60410 259 aa7.8□□□□□ -1.16
TRIO-222ENST00000515144 ANK3Q12955 4377 aaKnown RBP7.8□□□□□ -1.16
TRIO-222ENST00000515144 H3BS24 57 aa7.79□□□□□ -1.16
TRIO-222ENST00000515144 XP32Q5T750 250 aa7.79□□□□□ -1.16
TRIO-222ENST00000515144 KRTAP10-10P60014 251 aa7.75□□□□□ -1.17
TRIO-222ENST00000515144 KRTAP1-4P0C5Y4 121 aa7.72□□□□□ -1.17
TRIO-222ENST00000515144 OTOGQ6ZRI0 2925 aa7.7□□□□□ -1.18
TRIO-222ENST00000515144 TNP1P09430 55 aa7.67□□□□□ -1.18
TRIO-222ENST00000515144 MEGF8Q7Z7M0 2845 aa7.65□□□□□ -1.19
TRIO-222ENST00000515144 SRRM2Q9UQ35 2752 aaKnown RBP7.62□□□□□ -1.19
TRIO-222ENST00000515144 TPRXLQ17RH7 258 aa7.61□□□□□ -1.19
TRIO-222ENST00000515144 C10orf95Q9H7T3 257 aa7.57□□□□□ -1.2
TRIO-222ENST00000515144 FBN3Q75N90 2809 aa7.51□□□□□ -1.21
TRIO-222ENST00000515144 KRTAP13-3Q3SY46 172 aa7.48□□□□□ -1.21
TRIO-222ENST00000515144 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
TRIO-222ENST00000515144 HUWE1Q7Z6Z7 4374 aaKnown RBP7.43□□□□□ -1.22
TRIO-222ENST00000515144 KRTAP16-1A8MUX0 517 aa7.42□□□□□ -1.22
TRIO-222ENST00000515144 PRO2289Q9P1D8 64 aa7.4□□□□□ -1.22
TRIO-222ENST00000515144 NDUFAF8A1L188 74 aa7.27□□□□□ -1.25
TRIO-222ENST00000515144 A6NN06 94 aa7.27□□□□□ -1.25
TRIO-222ENST00000515144 H0YAA0 97 aa7.27□□□□□ -1.25
TRIO-222ENST00000515144 KMT2AQ03164 3969 aa7.13□□□□□ -1.27
TRIO-222ENST00000515144 FRAS1Q86XX4 4008 aa7.13□□□□□ -1.27
TRIO-222ENST00000515144 CMYA5Q8N3K9 4069 aa7.1□□□□□ -1.27
TRIO-222ENST00000515144 PP632Q6XCG6 107 aa7.07□□□□□ -1.28
TRIO-222ENST00000515144 LYSTQ99698 3801 aa7.07□□□□□ -1.28
TRIO-222ENST00000515144 KRTAP4-5Q9BYR2 181 aa7.04□□□□□ -1.28
TRIO-222ENST00000515144 ALMS1Q8TCU4 4167 aa7.02□□□□□ -1.29
TRIO-222ENST00000515144 ANK2Q01484 3957 aa7.01□□□□□ -1.29
TRIO-222ENST00000515144 KRTAP12-2P59991 146 aa7□□□□□ -1.29
TRIO-222ENST00000515144 DNAH9Q9NYC9 4486 aa6.89□□□□□ -1.31
TRIO-222ENST00000515144 DNAH3Q8TD57 4116 aa6.85□□□□□ -1.31
TRIO-222ENST00000515144 DNAH10Q8IVF4 4471 aa6.82□□□□□ -1.32
TRIO-222ENST00000515144 PRKDCP78527 4128 aaKnown RBP6.8□□□□□ -1.32
TRIO-222ENST00000515144 DNAH1Q9P2D7 4330 aa6.79□□□□□ -1.32
TRIO-222ENST00000515144 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms