RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 SMIM27A0A1W2PRY6 76 aa0.19□□□□□ -2.38
MATR3-223ENST00000514402 WFDC10BQ8IUB3 73 aa0.19□□□□□ -2.38
MATR3-223ENST00000514402 TNRC18O15417 2968 aaPredicted RBP0.19□□□□□ -2.38
MATR3-223ENST00000514402 FLNBO75369 2602 aaKnown RBP0.18□□□□□ -2.38
MATR3-223ENST00000514402 IGLV5-48A0A075B6I7 105 aa0.18□□□□□ -2.38
MATR3-223ENST00000514402 C9orf92A6NGG3 77 aa0.18□□□□□ -2.38
MATR3-223ENST00000514402 LINC01546A6NGU7 62 aa0.18□□□□□ -2.38
MATR3-223ENST00000514402 LYSTQ99698 3801 aa0.18□□□□□ -2.38
MATR3-223ENST00000514402 IQGAP2Q13576 1575 aa0.18□□□□□ -2.38
MATR3-223ENST00000514402 FLNCQ14315 2725 aa0.18□□□□□ -2.38
MATR3-223ENST00000514402 SPTBN4Q9H254 2564 aa0.17□□□□□ -2.38
MATR3-223ENST00000514402 HMCN2Q8NDA2 5059 aa0.17□□□□□ -2.38
MATR3-223ENST00000514402 FAM208AQ9UK61 1670 aaKnown RBP0.17□□□□□ -2.38
MATR3-223ENST00000514402 NFAT5O94916 1531 aa0.17□□□□□ -2.38
MATR3-223ENST00000514402 KRTAP6-2Q3LI66 62 aa0.16□□□□□ -2.38
MATR3-223ENST00000514402 NOP10Q9NPE3 64 aaKnown RBP0.16□□□□□ -2.38
MATR3-223ENST00000514402 PRRC2CQ9Y520 2896 aaKnown RBP0.16□□□□□ -2.38
MATR3-223ENST00000514402 VPS13BQ7Z7G8 4022 aa0.15□□□□□ -2.39
MATR3-223ENST00000514402 LRP1BQ9NZR2 4599 aa0.14□□□□□ -2.39
MATR3-223ENST00000514402 SPRR2AP35326 72 aa0.14□□□□□ -2.39
MATR3-223ENST00000514402 CUBNO60494 3623 aa0.13□□□□□ -2.39
MATR3-223ENST00000514402 TOMM5Q8N4H5 51 aa0.13□□□□□ -2.39
MATR3-223ENST00000514402 SMIM2Q9BVW6 85 aa0.13□□□□□ -2.39
MATR3-223ENST00000514402 STAB1Q9NY15 2570 aa0.13□□□□□ -2.39
MATR3-223ENST00000514402 SONP18583 2426 aaKnown RBP0.13□□□□□ -2.39
MATR3-223ENST00000514402 PKHD1P08F94 4074 aa0.12□□□□□ -2.39
MATR3-223ENST00000514402 DCHS2Q6V1P9 2916 aa0.11□□□□□ -2.39
MATR3-223ENST00000514402 FLNAP21333 2647 aaKnown RBP0.11□□□□□ -2.39
MATR3-223ENST00000514402 M0QY20 66 aa0.11□□□□□ -2.39
MATR3-223ENST00000514402 SPRR2GQ9BYE4 73 aa0.11□□□□□ -2.39
MATR3-223ENST00000514402 COL7A1Q02388 2944 aa0.11□□□□□ -2.39
MATR3-223ENST00000514402 SETD2Q9BYW2 2564 aaPredicted RBP0.11□□□□□ -2.39
MATR3-223ENST00000514402 COL6A3P12111 3177 aa0.11□□□□□ -2.39
MATR3-223ENST00000514402 GCN1Q92616 2671 aaKnown RBP0.1□□□□□ -2.39
MATR3-223ENST00000514402 MTORP42345 2549 aa0.1□□□□□ -2.39
MATR3-223ENST00000514402 PKD1P98161 4303 aa0.1□□□□□ -2.39
MATR3-223ENST00000514402 DEFB110Q30KQ9 67 aa0.1□□□□□ -2.39
MATR3-223ENST00000514402 GPR98Q8WXG9 6306 aa0.1□□□□□ -2.39
MATR3-223ENST00000514402 LRP2P98164 4655 aa0.1□□□□□ -2.39
MATR3-223ENST00000514402 SPG11Q96JI7 2443 aa0.09□□□□□ -2.39
MATR3-223ENST00000514402 DNAH9Q9NYC9 4486 aa0.09□□□□□ -2.39
MATR3-223ENST00000514402 MMP24-AS1A0A0U1RRL7 71 aa0.09□□□□□ -2.4
MATR3-223ENST00000514402 SVEP1Q4LDE5 3571 aa0.09□□□□□ -2.4
MATR3-223ENST00000514402 ANKHD1Q8IWZ3 2542 aaKnown RBP0.09□□□□□ -2.4
MATR3-223ENST00000514402 NF1P21359 2839 aa0.08□□□□□ -2.4
MATR3-223ENST00000514402 CLTCL1P53675 1640 aa0.08□□□□□ -2.4
MATR3-223ENST00000514402 ANK3Q12955 4377 aaKnown RBP0.08□□□□□ -2.4
MATR3-223ENST00000514402 SPRR2EP22531 72 aa0.07□□□□□ -2.4
MATR3-223ENST00000514402 DNAH3Q8TD57 4116 aa0.07□□□□□ -2.4
MATR3-223ENST00000514402 TRPM2O94759 1503 aa0.07□□□□□ -2.4
MATR3-223ENST00000514402 FLGP20930 4061 aaPredicted RBP0.07□□□□□ -2.4
MATR3-223ENST00000514402 TENM2Q9NT68 2774 aa0.06□□□□□ -2.4
MATR3-223ENST00000514402 LRRK2Q5S007 2527 aa0.06□□□□□ -2.4
MATR3-223ENST00000514402 NDUFA1O15239 70 aa0.06□□□□□ -2.4
MATR3-223ENST00000514402 TNP1P09430 55 aa0.06□□□□□ -2.4
MATR3-223ENST00000514402 DEFB131AP59861 70 aa0.06□□□□□ -2.4
MATR3-223ENST00000514402 ATP7AQ04656 1500 aa0.06□□□□□ -2.4
MATR3-223ENST00000514402 ACACAQ13085 2346 aa0.05□□□□□ -2.4
MATR3-223ENST00000514402 SACSQ9NZJ4 4579 aa0.05□□□□□ -2.4
MATR3-223ENST00000514402 FASNP49327 2511 aaKnown RBP0.05□□□□□ -2.4
MATR3-223ENST00000514402 MT1AP04731 61 aa0.05□□□□□ -2.4
MATR3-223ENST00000514402 A0A0C4DFX4 3053 aa0.05□□□□□ -2.4
MATR3-223ENST00000514402 SAMD9LQ8IVG5 1584 aa0.05□□□□□ -2.4
MATR3-223ENST00000514402 PKHD1L1Q86WI1 4243 aa0.05□□□□□ -2.4
MATR3-223ENST00000514402 A8MTW9 85 aa0.04□□□□□ -2.4
MATR3-223ENST00000514402 EPG5Q9HCE0 2579 aa0.03□□□□□ -2.4
MATR3-223ENST00000514402 FAT3Q8TDW7 4589 aa0.03□□□□□ -2.4
MATR3-223ENST00000514402 M0QZ58 72 aa0.03□□□□□ -2.4
MATR3-223ENST00000514402 ZZEF1O43149 2961 aa0.03□□□□□ -2.4
MATR3-223ENST00000514402 SPRR2FQ96RM1 72 aa0.03□□□□□ -2.4
MATR3-223ENST00000514402 PDZD2O15018 2839 aa0.03□□□□□ -2.41
MATR3-223ENST00000514402 ZANQ9Y493 2812 aa0.03□□□□□ -2.41
MATR3-223ENST00000514402 FAM186AA6NE01 2351 aa0.03□□□□□ -2.41
MATR3-223ENST00000514402 APOBP04114 4563 aaKnown RBP0.02□□□□□ -2.41
MATR3-223ENST00000514402 SYNE2Q8WXH0 6885 aaKnown RBP0.02□□□□□ -2.41
MATR3-223ENST00000514402 DMXL1Q9Y485 3027 aa0.02□□□□□ -2.41
MATR3-223ENST00000514402 ACACBO00763 2458 aa0.02□□□□□ -2.41
MATR3-223ENST00000514402 ANKRD11Q6UB99 2663 aaPredicted RBP0.02□□□□□ -2.41
MATR3-223ENST00000514402 TOP2AP11388 1531 aaKnown RBP0.02□□□□□ -2.41
MATR3-223ENST00000514402 HTTP42858 3142 aa0.02□□□□□ -2.41
MATR3-223ENST00000514402 RIF1Q5UIP0 2472 aaKnown RBP0.02□□□□□ -2.41
MATR3-223ENST00000514402 STAB2Q8WWQ8 2551 aa0.01□□□□□ -2.41
MATR3-223ENST00000514402 TACC2O95359 2948 aa0.01□□□□□ -2.41
MATR3-223ENST00000514402 KRTAP8-1Q8IUC2 63 aa0.01□□□□□ -2.41
MATR3-223ENST00000514402 TEP1Q99973 2627 aaKnown RBP0.01□□□□□ -2.41
MATR3-223ENST00000514402 SRRM2Q9UQ35 2752 aaKnown RBP0.01□□□□□ -2.41
MATR3-223ENST00000514402 TGP01266 2768 aa0□□□□□ -2.41
MATR3-223ENST00000514402 DNAH11Q96DT5 4516 aa0□□□□□ -2.41
MATR3-223ENST00000514402 KRTAP19-5Q3LI72 72 aa0□□□□□ -2.41
MATR3-223ENST00000514402 RANBP2P49792 3224 aaKnown RBP-0□□□□□ -2.41
MATR3-223ENST00000514402 TRIOO75962 3097 aa-0.01□□□□□ -2.41
MATR3-223ENST00000514402 LAMA1P25391 3075 aa-0.01□□□□□ -2.41
MATR3-223ENST00000514402 MAP1AP78559 2803 aaPredicted RBP-0.01□□□□□ -2.41
MATR3-223ENST00000514402 UTP20O75691 2785 aaKnown RBP-0.01□□□□□ -2.41
MATR3-223ENST00000514402 POLR2KP53803 58 aaKnown RBP-0.01□□□□□ -2.41
MATR3-223ENST00000514402 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
MATR3-223ENST00000514402 AKAP9Q99996 3911 aa-0.01□□□□□ -2.41
MATR3-223ENST00000514402 NBEAL1Q6ZS30 2694 aa-0.01□□□□□ -2.41
MATR3-223ENST00000514402 MYO18BQ8IUG5 2567 aa-0.01□□□□□ -2.41
MATR3-223ENST00000514402 DUOX1Q9NRD9 1551 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms