RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 MGAQ8IWI9 3026 aa1.82□□□□□ -2.12
CHD1-209ENST00000512844 PRB1P04280 392 aa1.82□□□□□ -2.12
CHD1-209ENST00000512844 PLAC8Q9NZF1 115 aa1.82□□□□□ -2.12
CHD1-209ENST00000512844 SPG11Q96JI7 2443 aa1.82□□□□□ -2.12
CHD1-209ENST00000512844 KALRNO60229 2985 aa1.82□□□□□ -2.12
CHD1-209ENST00000512844 SPEGQ15772 3267 aa1.81□□□□□ -2.12
CHD1-209ENST00000512844 TLN2Q9Y4G6 2542 aa1.81□□□□□ -2.12
CHD1-209ENST00000512844 SPRR1BP22528 89 aa1.81□□□□□ -2.12
CHD1-209ENST00000512844 WDFY3Q8IZQ1 3526 aa1.8□□□□□ -2.12
CHD1-209ENST00000512844 USP9YO00507 2555 aaPredicted RBP1.8□□□□□ -2.12
CHD1-209ENST00000512844 USP9XQ93008 2570 aaPredicted RBP1.8□□□□□ -2.12
CHD1-209ENST00000512844 LRBAP50851 2863 aa1.8□□□□□ -2.12
CHD1-209ENST00000512844 BOD1L1Q8NFC6 3051 aa1.8□□□□□ -2.12
CHD1-209ENST00000512844 FN1P02751 2386 aaKnown RBP1.8□□□□□ -2.12
CHD1-209ENST00000512844 EYSQ5T1H1 3165 aa1.8□□□□□ -2.12
CHD1-209ENST00000512844 CR1P17927 2039 aa1.79□□□□□ -2.12
CHD1-209ENST00000512844 WDFY4Q6ZS81 3184 aa1.79□□□□□ -2.12
CHD1-209ENST00000512844 UBE2DNLQ8IWF7 75 aa1.79□□□□□ -2.12
CHD1-209ENST00000512844 LINC00472Q9H8W2 130 aa1.79□□□□□ -2.12
CHD1-209ENST00000512844 FAM208BQ5VWN6 2430 aa1.79□□□□□ -2.12
CHD1-209ENST00000512844 MYO18BQ8IUG5 2567 aa1.79□□□□□ -2.12
CHD1-209ENST00000512844 DMXL2Q8TDJ6 3036 aa1.79□□□□□ -2.12
CHD1-209ENST00000512844 COL6A3P12111 3177 aa1.79□□□□□ -2.12
CHD1-209ENST00000512844 CELSR3Q9NYQ7 3312 aa1.79□□□□□ -2.12
CHD1-209ENST00000512844 MYO15AQ9UKN7 3530 aa1.79□□□□□ -2.12
CHD1-209ENST00000512844 CFAP47Q6ZTR5 3102 aa1.78□□□□□ -2.12
CHD1-209ENST00000512844 CACNA1AO00555 2505 aa1.78□□□□□ -2.12
CHD1-209ENST00000512844 MMP24-AS1A0A0U1RRL7 71 aa1.78□□□□□ -2.12
CHD1-209ENST00000512844 A0A1B0GU69 56 aa1.78□□□□□ -2.12
CHD1-209ENST00000512844 MRPL34Q9BQ48 92 aaKnown RBP1.78□□□□□ -2.12
CHD1-209ENST00000512844 JMJD1CQ15652 2540 aa1.78□□□□□ -2.12
CHD1-209ENST00000512844 MAP1AP78559 2803 aaPredicted RBP1.77□□□□□ -2.13
CHD1-209ENST00000512844 PKD1L2Q7Z442 2459 aa1.77□□□□□ -2.13
CHD1-209ENST00000512844 LOC400499M0QZD8 3231 aa1.77□□□□□ -2.13
CHD1-209ENST00000512844 SPINK7P58062 85 aa1.77□□□□□ -2.13
CHD1-209ENST00000512844 PRLHP81277 87 aa1.77□□□□□ -2.13
CHD1-209ENST00000512844 EPG5Q9HCE0 2579 aa1.76□□□□□ -2.13
CHD1-209ENST00000512844 LRRK2Q5S007 2527 aa1.76□□□□□ -2.13
CHD1-209ENST00000512844 NCOR2Q9Y618 2525 aa1.76□□□□□ -2.13
CHD1-209ENST00000512844 PTPN13Q12923 2485 aa1.76□□□□□ -2.13
CHD1-209ENST00000512844 DCHS2Q6V1P9 2916 aa1.76□□□□□ -2.13
CHD1-209ENST00000512844 A0A096LNI7 61 aa1.76□□□□□ -2.13
CHD1-209ENST00000512844 RPL37P61927 97 aaKnown RBP1.76□□□□□ -2.13
CHD1-209ENST00000512844 CHD6Q8TD26 2715 aa1.76□□□□□ -2.13
CHD1-209ENST00000512844 ATMQ13315 3056 aa1.76□□□□□ -2.13
CHD1-209ENST00000512844 CHD8Q9HCK8 2581 aa1.75□□□□□ -2.13
CHD1-209ENST00000512844 DMXL1Q9Y485 3027 aa1.74□□□□□ -2.13
CHD1-209ENST00000512844 SETXQ7Z333 2677 aaKnown RBP1.74□□□□□ -2.13
CHD1-209ENST00000512844 ABCA12Q86UK0 2595 aa1.74□□□□□ -2.13
CHD1-209ENST00000512844 ZNF462Q96JM2 2506 aa1.74□□□□□ -2.13
CHD1-209ENST00000512844 SONP18583 2426 aaKnown RBP1.74□□□□□ -2.13
CHD1-209ENST00000512844 POLQO75417 2590 aa1.73□□□□□ -2.13
CHD1-209ENST00000512844 PIEZO1Q92508 2521 aa1.73□□□□□ -2.13
CHD1-209ENST00000512844 CCDC168Q8NDH2 2452 aa1.73□□□□□ -2.13
CHD1-209ENST00000512844 ITPR3Q14573 2671 aa1.73□□□□□ -2.13
CHD1-209ENST00000512844 GCN1Q92616 2671 aaKnown RBP1.73□□□□□ -2.13
CHD1-209ENST00000512844 KRTAP4-1Q9BYQ7 146 aa1.73□□□□□ -2.13
CHD1-209ENST00000512844 UTP20O75691 2785 aaKnown RBP1.73□□□□□ -2.13
CHD1-209ENST00000512844 FLNAP21333 2647 aaKnown RBP1.72□□□□□ -2.13
CHD1-209ENST00000512844 CELSR1Q9NYQ6 3014 aa1.72□□□□□ -2.13
CHD1-209ENST00000512844 SPTBN4Q9H254 2564 aa1.72□□□□□ -2.13
CHD1-209ENST00000512844 ZFYVE26Q68DK2 2539 aa1.72□□□□□ -2.13
CHD1-209ENST00000512844 LY6G6CO95867 125 aa1.72□□□□□ -2.13
CHD1-209ENST00000512844 SSBP3-AS1Q7Z2R9 100 aa1.72□□□□□ -2.13
CHD1-209ENST00000512844 SETD2Q9BYW2 2564 aaPredicted RBP1.72□□□□□ -2.13
CHD1-209ENST00000512844 SMG1Q96Q15 3661 aaKnown RBP1.72□□□□□ -2.13
CHD1-209ENST00000512844 BSNQ9UPA5 3926 aa1.72□□□□□ -2.13
CHD1-209ENST00000512844 MXRA5Q9NR99 2828 aa1.72□□□□□ -2.13
CHD1-209ENST00000512844 UBR5O95071 2799 aaPredicted RBP1.71□□□□□ -2.14
CHD1-209ENST00000512844 ITPR1Q14643 2758 aa1.71□□□□□ -2.14
CHD1-209ENST00000512844 SPENQ96T58 3664 aaKnown RBP1.71□□□□□ -2.14
CHD1-209ENST00000512844 Q6ZSA8 131 aa1.71□□□□□ -2.14
CHD1-209ENST00000512844 FLNCQ14315 2725 aa1.71□□□□□ -2.14
CHD1-209ENST00000512844 DMDP11532 3685 aa1.71□□□□□ -2.14
CHD1-209ENST00000512844 IGSF10Q6WRI0 2623 aa1.7□□□□□ -2.14
CHD1-209ENST00000512844 TEX15Q9BXT5 2789 aa1.7□□□□□ -2.14
CHD1-209ENST00000512844 CFAP46Q8IYW2 2715 aa1.7□□□□□ -2.14
CHD1-209ENST00000512844 MTORP42345 2549 aa1.7□□□□□ -2.14
CHD1-209ENST00000512844 ASH1LQ9NR48 2969 aaKnown RBP1.7□□□□□ -2.14
CHD1-209ENST00000512844 DCHS1Q96JQ0 3298 aa1.7□□□□□ -2.14
CHD1-209ENST00000512844 ZFHX4Q86UP3 3567 aa1.7□□□□□ -2.14
CHD1-209ENST00000512844 SPINK6Q6UWN8 80 aa1.7□□□□□ -2.14
CHD1-209ENST00000512844 SMR3AQ99954 134 aa1.7□□□□□ -2.14
CHD1-209ENST00000512844 ZANQ9Y493 2812 aa1.69□□□□□ -2.14
CHD1-209ENST00000512844 COL12A1Q99715 3063 aa1.69□□□□□ -2.14
CHD1-209ENST00000512844 APLNQ9ULZ1 77 aa1.68□□□□□ -2.14
CHD1-209ENST00000512844 CENPEQ02224 2701 aa1.68□□□□□ -2.14
CHD1-209ENST00000512844 NBEAL2Q6ZNJ1 2754 aa1.67□□□□□ -2.14
CHD1-209ENST00000512844 KMT2BQ9UMN6 2715 aaPredicted RBP1.67□□□□□ -2.14
CHD1-209ENST00000512844 FBN3Q75N90 2809 aa1.67□□□□□ -2.14
CHD1-209ENST00000512844 UNC79Q9P2D8 2635 aa1.67□□□□□ -2.14
CHD1-209ENST00000512844 APCP25054 2843 aa1.67□□□□□ -2.14
CHD1-209ENST00000512844 CSMD1Q96PZ7 3565 aa1.66□□□□□ -2.14
CHD1-209ENST00000512844 MUC3AQ02505 3323 aa1.66□□□□□ -2.14
CHD1-209ENST00000512844 FBN2P35556 2912 aa1.66□□□□□ -2.14
CHD1-209ENST00000512844 CELSR2Q9HCU4 2923 aa1.66□□□□□ -2.14
CHD1-209ENST00000512844 CRYBG3Q68DQ2 2970 aa1.65□□□□□ -2.14
CHD1-209ENST00000512844 USP24Q9UPU5 2620 aa1.65□□□□□ -2.15
CHD1-209ENST00000512844 ACANP16112 2415 aa1.65□□□□□ -2.15
CHD1-209ENST00000512844 K7EIL1 84 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 211.4 ms