RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 LIMD2Q9BT23 127 aa5.31□□□□□ -1.56
NR1I3-230ENST00000511944 KRTAP17-1Q9BYP8 105 aa5.31□□□□□ -1.56
NR1I3-230ENST00000511944 PCP4P48539 62 aa5.3□□□□□ -1.56
NR1I3-230ENST00000511944 LINC00472Q9H8W2 130 aa5.29□□□□□ -1.56
NR1I3-230ENST00000511944 HSPG2P98160 4391 aa5.29□□□□□ -1.56
NR1I3-230ENST00000511944 PKHD1L1Q86WI1 4243 aa5.28□□□□□ -1.56
NR1I3-230ENST00000511944 A0A0G2JQZ4 141 aa5.28□□□□□ -1.56
NR1I3-230ENST00000511944 EPPK1P58107 5090 aaKnown RBP5.28□□□□□ -1.56
NR1I3-230ENST00000511944 Q8N9P0 234 aaPredicted RBP5.27□□□□□ -1.57
NR1I3-230ENST00000511944 LINC00304Q8N9R0 145 aa5.27□□□□□ -1.57
NR1I3-230ENST00000511944 A0A0A0MQY5 61 aa5.26□□□□□ -1.57
NR1I3-230ENST00000511944 IGKV3D-7A0A0C4DH55 119 aa5.26□□□□□ -1.57
NR1I3-230ENST00000511944 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
NR1I3-230ENST00000511944 MPLKIPQ8TAP9 179 aa5.26□□□□□ -1.57
NR1I3-230ENST00000511944 FAT1Q14517 4588 aa5.25□□□□□ -1.57
NR1I3-230ENST00000511944 A8MWP4 228 aa5.25□□□□□ -1.57
NR1I3-230ENST00000511944 IGKV2-30P06310 120 aa5.25□□□□□ -1.57
NR1I3-230ENST00000511944 Q96NJ1 140 aa5.25□□□□□ -1.57
NR1I3-230ENST00000511944 KIAA1109Q2LD37 5005 aa5.24□□□□□ -1.57
NR1I3-230ENST00000511944 NDUFB1O75438 58 aa5.24□□□□□ -1.57
NR1I3-230ENST00000511944 DSCR10P59022 87 aa5.24□□□□□ -1.57
NR1I3-230ENST00000511944 OXTP01178 125 aa5.23□□□□□ -1.57
NR1I3-230ENST00000511944 IGKV4-1P06312 121 aa5.23□□□□□ -1.57
NR1I3-230ENST00000511944 KRTAP10-8P60410 259 aa5.23□□□□□ -1.57
NR1I3-230ENST00000511944 HIST1H4AP62805 103 aaKnown RBP5.23□□□□□ -1.57
NR1I3-230ENST00000511944 HRCT1Q6UXD1 115 aa5.23□□□□□ -1.57
NR1I3-230ENST00000511944 PRR15Q8IV56 129 aa5.22□□□□□ -1.57
NR1I3-230ENST00000511944 BIRC6Q9NR09 4857 aa5.21□□□□□ -1.58
NR1I3-230ENST00000511944 FAM236AA0A1B0GUQ0 79 aa5.2□□□□□ -1.58
NR1I3-230ENST00000511944 FAM236BA0A1B0GV22 79 aa5.2□□□□□ -1.58
NR1I3-230ENST00000511944 K7EQZ3 153 aa5.2□□□□□ -1.58
NR1I3-230ENST00000511944 ATOX1O00244 68 aa5.2□□□□□ -1.58
NR1I3-230ENST00000511944 SMIM20Q8N5G0 67 aa5.2□□□□□ -1.58
NR1I3-230ENST00000511944 A0A1B0GVX0 72 aa5.19□□□□□ -1.58
NR1I3-230ENST00000511944 C1orf195Q5TG92 126 aa5.19□□□□□ -1.58
NR1I3-230ENST00000511944 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
NR1I3-230ENST00000511944 A0A087WVE0 104 aa5.18□□□□□ -1.58
NR1I3-230ENST00000511944 C8orf87E5RJ46 101 aa5.18□□□□□ -1.58
NR1I3-230ENST00000511944 HCG22E2RYF7 251 aa5.17□□□□□ -1.58
NR1I3-230ENST00000511944 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
NR1I3-230ENST00000511944 DEFB116Q30KQ4 102 aa5.16□□□□□ -1.58
NR1I3-230ENST00000511944 Q8N9L7 120 aa5.16□□□□□ -1.58
NR1I3-230ENST00000511944 KRTAP29-1A8MX34 341 aaPredicted RBP5.15□□□□□ -1.59
NR1I3-230ENST00000511944 MMP24-AS1A0A0U1RRL7 71 aa5.14□□□□□ -1.59
NR1I3-230ENST00000511944 MT1HL1P0DM35 61 aa5.14□□□□□ -1.59
NR1I3-230ENST00000511944 FP248Q71RG6 208 aaPredicted RBP5.14□□□□□ -1.59
NR1I3-230ENST00000511944 C8orf17Q9NRJ1 99 aa5.14□□□□□ -1.59
NR1I3-230ENST00000511944 CASC2Q6XLA1 102 aa5.13□□□□□ -1.59
NR1I3-230ENST00000511944 HERC2O95714 4834 aa5.13□□□□□ -1.59
NR1I3-230ENST00000511944 hDV103S1A0JD37 113 aa5.12□□□□□ -1.59
NR1I3-230ENST00000511944 TMEM254Q8TBM7 123 aa5.12□□□□□ -1.59
NR1I3-230ENST00000511944 ANAPC13Q9BS18 74 aa5.12□□□□□ -1.59
NR1I3-230ENST00000511944 TRAV7A0A075B6U4 112 aa5.11□□□□□ -1.59
NR1I3-230ENST00000511944 IGHV6-1A0A0B4J1U7 121 aa5.11□□□□□ -1.59
NR1I3-230ENST00000511944 SERP2Q8N6R1 65 aa5.11□□□□□ -1.59
NR1I3-230ENST00000511944 TNXBP22105 4242 aa5.1□□□□□ -1.59
NR1I3-230ENST00000511944 LINC00313P59037 77 aa5.1□□□□□ -1.59
NR1I3-230ENST00000511944 TP53AIP1Q9HCN2 124 aa5.1□□□□□ -1.59
NR1I3-230ENST00000511944 FAT3Q8TDW7 4589 aa5.09□□□□□ -1.59
NR1I3-230ENST00000511944 MRPL34Q9BQ48 92 aaKnown RBP5.09□□□□□ -1.59
NR1I3-230ENST00000511944 OCR1Q9BZK8 76 aa5.09□□□□□ -1.59
NR1I3-230ENST00000511944 UQCRQO14949 82 aa5.08□□□□□ -1.6
NR1I3-230ENST00000511944 FLG2Q5D862 2391 aaPredicted RBP5.07□□□□□ -1.6
NR1I3-230ENST00000511944 COX7CP15954 63 aa5.07□□□□□ -1.6
NR1I3-230ENST00000511944 WFDC13Q8IUB5 93 aa5.07□□□□□ -1.6
NR1I3-230ENST00000511944 H3BPC8 53 aa5.05□□□□□ -1.6
NR1I3-230ENST00000511944 C5orf47Q569G3 176 aa5.05□□□□□ -1.6
NR1I3-230ENST00000511944 LRP1Q07954 4544 aaKnown RBP5.04□□□□□ -1.6
NR1I3-230ENST00000511944 KRTAP16-1A8MUX0 517 aa5.04□□□□□ -1.6
NR1I3-230ENST00000511944 MYCBP2O75592 4640 aa5.04□□□□□ -1.6
NR1I3-230ENST00000511944 NOTCH2NLQ7Z3S9 236 aa5.03□□□□□ -1.6
NR1I3-230ENST00000511944 ABCA13Q86UQ4 5058 aa5.03□□□□□ -1.6
NR1I3-230ENST00000511944 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
NR1I3-230ENST00000511944 TRAV22A0A0B4J277 110 aa5.01□□□□□ -1.61
NR1I3-230ENST00000511944 KLKP1Q107X0 134 aa5.01□□□□□ -1.61
NR1I3-230ENST00000511944 MP68P56378 58 aa5□□□□□ -1.61
NR1I3-230ENST00000511944 C20orf166-AS1Q96NR2 134 aa5□□□□□ -1.61
NR1I3-230ENST00000511944 IGLV7-46A0A075B6I9 117 aa4.99□□□□□ -1.61
NR1I3-230ENST00000511944 IGKV2D-30A0A075B6S6 120 aa4.99□□□□□ -1.61
NR1I3-230ENST00000511944 A8MUU9 505 aa4.99□□□□□ -1.61
NR1I3-230ENST00000511944 TPRXLQ17RH7 258 aa4.99□□□□□ -1.61
NR1I3-230ENST00000511944 RETNLBQ9BQ08 111 aa4.99□□□□□ -1.61
NR1I3-230ENST00000511944 NDUFC1O43677 76 aa4.98□□□□□ -1.61
NR1I3-230ENST00000511944 NDUFS5O43920 106 aa4.98□□□□□ -1.61
NR1I3-230ENST00000511944 Q75L30 129 aa4.98□□□□□ -1.61
NR1I3-230ENST00000511944 A0A0U1RQV1 116 aa4.97□□□□□ -1.61
NR1I3-230ENST00000511944 KRTAP13-3Q3SY46 172 aa4.97□□□□□ -1.61
NR1I3-230ENST00000511944 H0Y9P7 68 aa4.96□□□□□ -1.62
NR1I3-230ENST00000511944 C20orf197Q8N268 126 aa4.96□□□□□ -1.62
NR1I3-230ENST00000511944 DMBT1Q9UGM3 2413 aaPredicted RBP4.95□□□□□ -1.62
NR1I3-230ENST00000511944 LOC101927531A0A1B0GV80 90 aa4.95□□□□□ -1.62
NR1I3-230ENST00000511944 CCDC179H3BU77 68 aa4.95□□□□□ -1.62
NR1I3-230ENST00000511944 ZCCHC13Q8WW36 166 aaKnown RBP4.95□□□□□ -1.62
NR1I3-230ENST00000511944 PRR4Q16378 134 aa4.93□□□□□ -1.62
NR1I3-230ENST00000511944 C9orf92A6NGG3 77 aa4.92□□□□□ -1.62
NR1I3-230ENST00000511944 C1orf64Q8NEQ6 169 aa4.91□□□□□ -1.62
NR1I3-230ENST00000511944 LINC00208Q96KT6 92 aa4.91□□□□□ -1.62
NR1I3-230ENST00000511944 PCLOQ9Y6V0 5065 aa4.9□□□□□ -1.62
NR1I3-230ENST00000511944 RPL37P61927 97 aaKnown RBP4.9□□□□□ -1.63
NR1I3-230ENST00000511944 ATP5EP56381 51 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 421 ms