RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ASB16-AS1Q495Z4 193 aa6.64□□□□□ -1.35
SH3RF1-203ENST00000508685 CIRBP-AS1Q8TBR5 109 aa6.64□□□□□ -1.35
SH3RF1-203ENST00000508685 C1orf195Q5TG92 126 aa6.63□□□□□ -1.35
SH3RF1-203ENST00000508685 PRR4Q16378 134 aa6.62□□□□□ -1.35
SH3RF1-203ENST00000508685 KRTAP10-1P60331 282 aa6.62□□□□□ -1.35
SH3RF1-203ENST00000508685 LRP1BQ9NZR2 4599 aa6.62□□□□□ -1.35
SH3RF1-203ENST00000508685 BIRC6Q9NR09 4857 aa6.61□□□□□ -1.35
SH3RF1-203ENST00000508685 Q96NJ1 140 aa6.6□□□□□ -1.35
SH3RF1-203ENST00000508685 LIMD2Q9BT23 127 aa6.6□□□□□ -1.35
SH3RF1-203ENST00000508685 IGLV7-46A0A075B6I9 117 aa6.6□□□□□ -1.35
SH3RF1-203ENST00000508685 IGLV9-49A0A0B4J1Y8 123 aa6.6□□□□□ -1.35
SH3RF1-203ENST00000508685 ZNF861PO60384 105 aa6.6□□□□□ -1.35
SH3RF1-203ENST00000508685 CDK2AP2O75956 126 aa6.6□□□□□ -1.35
SH3RF1-203ENST00000508685 Q6ZSA8 131 aa6.59□□□□□ -1.35
SH3RF1-203ENST00000508685 C8orf17Q9NRJ1 99 aa6.59□□□□□ -1.35
SH3RF1-203ENST00000508685 ANAPC11Q9NYG5 84 aa6.59□□□□□ -1.36
SH3RF1-203ENST00000508685 VPS13BQ7Z7G8 4022 aa6.57□□□□□ -1.36
SH3RF1-203ENST00000508685 A0A1B0GVX0 72 aa6.57□□□□□ -1.36
SH3RF1-203ENST00000508685 IGLV7-43P04211 117 aa6.57□□□□□ -1.36
SH3RF1-203ENST00000508685 PSPHP1O15172 72 aa6.55□□□□□ -1.36
SH3RF1-203ENST00000508685 C4orf48Q5BLP8 95 aa6.55□□□□□ -1.36
SH3RF1-203ENST00000508685 A0A1B0GVY2 172 aa6.55□□□□□ -1.36
SH3RF1-203ENST00000508685 Q8N9P0 234 aaPredicted RBP6.55□□□□□ -1.36
SH3RF1-203ENST00000508685 MRPL34Q9BQ48 92 aaKnown RBP6.54□□□□□ -1.36
SH3RF1-203ENST00000508685 IGHV6-1A0A0B4J1U7 121 aa6.52□□□□□ -1.37
SH3RF1-203ENST00000508685 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.37
SH3RF1-203ENST00000508685 A8MUN3 132 aa6.52□□□□□ -1.37
SH3RF1-203ENST00000508685 CD164Q04900 197 aa6.52□□□□□ -1.37
SH3RF1-203ENST00000508685 COA5Q86WW8 74 aa6.52□□□□□ -1.37
SH3RF1-203ENST00000508685 NDUFS5O43920 106 aa6.5□□□□□ -1.37
SH3RF1-203ENST00000508685 Q5VV11 94 aa6.5□□□□□ -1.37
SH3RF1-203ENST00000508685 LOC101927531A0A1B0GV80 90 aa6.49□□□□□ -1.37
SH3RF1-203ENST00000508685 SSBP3-AS1Q7Z2R9 100 aa6.48□□□□□ -1.37
SH3RF1-203ENST00000508685 PCOTHQ58A44 107 aa6.47□□□□□ -1.37
SH3RF1-203ENST00000508685 C8orf87E5RJ46 101 aa6.47□□□□□ -1.37
SH3RF1-203ENST00000508685 Q75L30 129 aa6.47□□□□□ -1.37
SH3RF1-203ENST00000508685 PRR15LQ9BU68 103 aa6.47□□□□□ -1.37
SH3RF1-203ENST00000508685 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.38
SH3RF1-203ENST00000508685 LINC01558Q9Y6Z2 57 aa6.44□□□□□ -1.38
SH3RF1-203ENST00000508685 KIAA1109Q2LD37 5005 aa6.44□□□□□ -1.38
SH3RF1-203ENST00000508685 A0A087X002 238 aa6.43□□□□□ -1.38
SH3RF1-203ENST00000508685 PMAIP1Q13794 54 aa6.42□□□□□ -1.38
SH3RF1-203ENST00000508685 LCE2DQ5TA82 110 aaPredicted RBP6.42□□□□□ -1.38
SH3RF1-203ENST00000508685 HERC2O95714 4834 aa6.42□□□□□ -1.38
SH3RF1-203ENST00000508685 APOBP04114 4563 aaKnown RBP6.41□□□□□ -1.38
SH3RF1-203ENST00000508685 RYR1P21817 5038 aa6.4□□□□□ -1.38
SH3RF1-203ENST00000508685 KRTAP13-2Q52LG2 175 aa6.4□□□□□ -1.39
SH3RF1-203ENST00000508685 FAT1Q14517 4588 aa6.4□□□□□ -1.39
SH3RF1-203ENST00000508685 SMR3BP02814 79 aaPredicted RBP6.39□□□□□ -1.39
SH3RF1-203ENST00000508685 KRTAP1-4P0C5Y4 121 aa6.39□□□□□ -1.39
SH3RF1-203ENST00000508685 HRES1P13985 223 aa6.39□□□□□ -1.39
SH3RF1-203ENST00000508685 NOTCH2NLQ7Z3S9 236 aa6.39□□□□□ -1.39
SH3RF1-203ENST00000508685 KRTAP13-3Q3SY46 172 aa6.38□□□□□ -1.39
SH3RF1-203ENST00000508685 SPINK6Q6UWN8 80 aa6.38□□□□□ -1.39
SH3RF1-203ENST00000508685 ATP11AUNQ6ZP68 121 aa6.38□□□□□ -1.39
SH3RF1-203ENST00000508685 A6NED7 52 aa6.38□□□□□ -1.39
SH3RF1-203ENST00000508685 KRTAP3-3Q9BYR6 98 aa6.37□□□□□ -1.39
SH3RF1-203ENST00000508685 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
SH3RF1-203ENST00000508685 ACYP2P14621 99 aa6.37□□□□□ -1.39
SH3RF1-203ENST00000508685 FAM229AH3BQW9 127 aa6.36□□□□□ -1.39
SH3RF1-203ENST00000508685 SPAG11AQ6PDA7 123 aa6.36□□□□□ -1.39
SH3RF1-203ENST00000508685 CDC42SE1Q9NRR8 79 aa6.36□□□□□ -1.39
SH3RF1-203ENST00000508685 LINC00313P59037 77 aa6.35□□□□□ -1.39
SH3RF1-203ENST00000508685 Q5W150 140 aa6.35□□□□□ -1.39
SH3RF1-203ENST00000508685 HSPG2P98160 4391 aa6.34□□□□□ -1.39
SH3RF1-203ENST00000508685 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
SH3RF1-203ENST00000508685 LCA10Q71F78 164 aa6.32□□□□□ -1.4
SH3RF1-203ENST00000508685 DMAC1Q96GE9 116 aa6.3□□□□□ -1.4
SH3RF1-203ENST00000508685 KRTAP10-4P60372 401 aaPredicted RBP6.3□□□□□ -1.4
SH3RF1-203ENST00000508685 SPTSSBQ8NFR3 76 aa6.28□□□□□ -1.4
SH3RF1-203ENST00000508685 TYMSOSQ8TAI1 123 aa6.28□□□□□ -1.4
SH3RF1-203ENST00000508685 A8MU10 97 aa6.27□□□□□ -1.41
SH3RF1-203ENST00000508685 IGKV2-30P06310 120 aa6.27□□□□□ -1.41
SH3RF1-203ENST00000508685 PRR26Q8N8Z3 221 aa6.27□□□□□ -1.41
SH3RF1-203ENST00000508685 Q8N1X5 172 aa6.26□□□□□ -1.41
SH3RF1-203ENST00000508685 SEC61GP60059 68 aa6.26□□□□□ -1.41
SH3RF1-203ENST00000508685 KTN1-AS1Q86SY8 53 aa6.25□□□□□ -1.41
SH3RF1-203ENST00000508685 KRTAP17-1Q9BYP8 105 aa6.25□□□□□ -1.41
SH3RF1-203ENST00000508685 ABCA13Q86UQ4 5058 aa6.25□□□□□ -1.41
SH3RF1-203ENST00000508685 A6NN06 94 aa6.23□□□□□ -1.41
SH3RF1-203ENST00000508685 KRTAP4-5Q9BYR2 181 aa6.23□□□□□ -1.41
SH3RF1-203ENST00000508685 KRTAP16-1A8MUX0 517 aa6.22□□□□□ -1.41
SH3RF1-203ENST00000508685 SPINK7P58062 85 aa6.22□□□□□ -1.41
SH3RF1-203ENST00000508685 PCLOQ9Y6V0 5065 aa6.22□□□□□ -1.41
SH3RF1-203ENST00000508685 SPINK1P00995 79 aa6.2□□□□□ -1.42
SH3RF1-203ENST00000508685 PKHD1L1Q86WI1 4243 aa6.2□□□□□ -1.42
SH3RF1-203ENST00000508685 Q5VSD8 79 aa6.2□□□□□ -1.42
SH3RF1-203ENST00000508685 LINC00304Q8N9R0 145 aa6.19□□□□□ -1.42
SH3RF1-203ENST00000508685 LRP1Q07954 4544 aaKnown RBP6.18□□□□□ -1.42
SH3RF1-203ENST00000508685 A0A1B0GU69 56 aa6.18□□□□□ -1.42
SH3RF1-203ENST00000508685 RPS29P62273 56 aaKnown RBP6.16□□□□□ -1.42
SH3RF1-203ENST00000508685 C7orf65Q6ZTY9 151 aa6.15□□□□□ -1.42
SH3RF1-203ENST00000508685 RETNLBQ9BQ08 111 aa6.15□□□□□ -1.42
SH3RF1-203ENST00000508685 IGKV2D-30A0A075B6S6 120 aa6.13□□□□□ -1.43
SH3RF1-203ENST00000508685 J3QL48 77 aa6.13□□□□□ -1.43
SH3RF1-203ENST00000508685 MYCBP2O75592 4640 aa6.12□□□□□ -1.43
SH3RF1-203ENST00000508685 SPATA8Q6RVD6 105 aa6.12□□□□□ -1.43
SH3RF1-203ENST00000508685 TNXBP22105 4242 aa6.11□□□□□ -1.43
SH3RF1-203ENST00000508685 UQCR11O14957 56 aa6.1□□□□□ -1.43
SH3RF1-203ENST00000508685 FLG2Q5D862 2391 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms