RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 F8WEM9 126 aa2.46□□□□□ -2.02
NUP54-206ENST00000508465 H3BUT2 72 aa2.46□□□□□ -2.02
NUP54-206ENST00000508465 FXYD2P54710 66 aa2.46□□□□□ -2.02
NUP54-206ENST00000508465 CD164Q04900 197 aa2.46□□□□□ -2.02
NUP54-206ENST00000508465 ASB16-AS1Q495Z4 193 aa2.46□□□□□ -2.02
NUP54-206ENST00000508465 LIMD2Q9BT23 127 aa2.46□□□□□ -2.02
NUP54-206ENST00000508465 SNHG12Q9BXW3 62 aa2.46□□□□□ -2.02
NUP54-206ENST00000508465 PRO1854Q9UHT4 67 aa2.46□□□□□ -2.02
NUP54-206ENST00000508465 MUC17Q685J3 4493 aa2.46□□□□□ -2.02
NUP54-206ENST00000508465 K7ERJ3 54 aa2.45□□□□□ -2.02
NUP54-206ENST00000508465 PCOTHQ58A44 107 aa2.45□□□□□ -2.02
NUP54-206ENST00000508465 BVES-AS1Q5T3Y7 98 aa2.45□□□□□ -2.02
NUP54-206ENST00000508465 IGFL1Q6UW32 110 aa2.45□□□□□ -2.02
NUP54-206ENST00000508465 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.45□□□□□ -2.02
NUP54-206ENST00000508465 A0A0B4J2C4 111 aa2.44□□□□□ -2.02
NUP54-206ENST00000508465 A0A1B0GV72 72 aa2.44□□□□□ -2.02
NUP54-206ENST00000508465 H0YGX0 51 aa2.44□□□□□ -2.02
NUP54-206ENST00000508465 TCL1BO95988 128 aa2.44□□□□□ -2.02
NUP54-206ENST00000508465 FABP2P12104 132 aa2.44□□□□□ -2.02
NUP54-206ENST00000508465 CLEC2BQ92478 149 aa2.44□□□□□ -2.02
NUP54-206ENST00000508465 TRBV7-7A0A0K0K1E9 115 aa2.43□□□□□ -2.02
NUP54-206ENST00000508465 A0A0U1RQV1 116 aa2.43□□□□□ -2.02
NUP54-206ENST00000508465 FAM240AA0A1B0GVK7 77 aa2.43□□□□□ -2.02
NUP54-206ENST00000508465 SNCGO76070 127 aa2.43□□□□□ -2.02
NUP54-206ENST00000508465 PSMB2P49721 201 aa2.43□□□□□ -2.02
NUP54-206ENST00000508465 HSD52Q0P140 79 aa2.43□□□□□ -2.02
NUP54-206ENST00000508465 Q5XG85 94 aa2.43□□□□□ -2.02
NUP54-206ENST00000508465 Q6JHZ5 121 aa2.43□□□□□ -2.02
NUP54-206ENST00000508465 PP632Q6XCG6 107 aa2.43□□□□□ -2.02
NUP54-206ENST00000508465 SMIM26A0A096LP01 95 aa2.42□□□□□ -2.02
NUP54-206ENST00000508465 H3BMG7 143 aa2.42□□□□□ -2.02
NUP54-206ENST00000508465 CAMK2N1Q7Z7J9 78 aa2.42□□□□□ -2.02
NUP54-206ENST00000508465 UQCR10Q9UDW1 63 aa2.42□□□□□ -2.02
NUP54-206ENST00000508465 SCGB1C2P0DMR2 95 aa2.41□□□□□ -2.02
NUP54-206ENST00000508465 PPDPFLQ8WWR9 84 aa2.41□□□□□ -2.02
NUP54-206ENST00000508465 OBSCN-AS1Q96MR7 158 aa2.41□□□□□ -2.02
NUP54-206ENST00000508465 A0A1W2PNM2 257 aa2.4□□□□□ -2.03
NUP54-206ENST00000508465 LST1O00453 97 aa2.4□□□□□ -2.03
NUP54-206ENST00000508465 NAA38Q9BRA0 125 aaKnown RBP2.4□□□□□ -2.03
NUP54-206ENST00000508465 A0A087WSZ3 146 aa2.39□□□□□ -2.03
NUP54-206ENST00000508465 A0A1B0GX51 115 aa2.39□□□□□ -2.03
NUP54-206ENST00000508465 COX6CP09669 75 aa2.39□□□□□ -2.03
NUP54-206ENST00000508465 DEFB116Q30KQ4 102 aa2.39□□□□□ -2.03
NUP54-206ENST00000508465 TEN1Q86WV5 123 aa2.39□□□□□ -2.03
NUP54-206ENST00000508465 ANKRD29Q8N6D5 301 aa2.39□□□□□ -2.03
NUP54-206ENST00000508465 Q96NJ1 140 aa2.39□□□□□ -2.03
NUP54-206ENST00000508465 DNAL4O96015 105 aa2.38□□□□□ -2.03
NUP54-206ENST00000508465 BAALC-AS2P0C853 105 aa2.38□□□□□ -2.03
NUP54-206ENST00000508465 RPL37P61927 97 aaKnown RBP2.38□□□□□ -2.03
NUP54-206ENST00000508465 KRTAP19-2Q3LHN2 52 aa2.38□□□□□ -2.03
NUP54-206ENST00000508465 ORMDL1Q9P0S3 153 aa2.38□□□□□ -2.03
NUP54-206ENST00000508465 TMEM256-PLSCR3K7ERE1 68 aa2.37□□□□□ -2.03
NUP54-206ENST00000508465 Q6Q795 121 aa2.37□□□□□ -2.03
NUP54-206ENST00000508465 VPS25Q9BRG1 176 aa2.37□□□□□ -2.03
NUP54-206ENST00000508465 CCKP06307 115 aa2.36□□□□□ -2.03
NUP54-206ENST00000508465 IGKV4-1P06312 121 aa2.36□□□□□ -2.03
NUP54-206ENST00000508465 BATFQ16520 125 aa2.36□□□□□ -2.03
NUP54-206ENST00000508465 ATP11AUNQ6ZP68 121 aa2.36□□□□□ -2.03
NUP54-206ENST00000508465 TRBV7-4A0A0J9YYF1 115 aa2.35□□□□□ -2.03
NUP54-206ENST00000508465 LOC105371267A0A1B0GV96 52 aa2.35□□□□□ -2.03
NUP54-206ENST00000508465 H3BQ85 93 aa2.35□□□□□ -2.03
NUP54-206ENST00000508465 PSPHP1O15172 72 aa2.35□□□□□ -2.03
NUP54-206ENST00000508465 NDUFS5O43920 106 aa2.35□□□□□ -2.03
NUP54-206ENST00000508465 TRACP01848 142 aa2.35□□□□□ -2.03
NUP54-206ENST00000508465 MT1HP80294 61 aa2.35□□□□□ -2.03
NUP54-206ENST00000508465 SIGMAR1Q99720 223 aa2.35□□□□□ -2.03
NUP54-206ENST00000508465 SS18L2Q9UHA2 77 aa2.35□□□□□ -2.03
NUP54-206ENST00000508465 IGHV6-1A0A0B4J1U7 121 aa2.34□□□□□ -2.03
NUP54-206ENST00000508465 M0R143 59 aa2.34□□□□□ -2.03
NUP54-206ENST00000508465 SMIM6P0DI80 62 aa2.34□□□□□ -2.03
NUP54-206ENST00000508465 LINC00313P59037 77 aa2.34□□□□□ -2.03
NUP54-206ENST00000508465 RBM3P98179 157 aaKnown RBP2.34□□□□□ -2.03
NUP54-206ENST00000508465 COX6B2Q6YFQ2 88 aa2.34□□□□□ -2.03
NUP54-206ENST00000508465 LINC00472Q9H8W2 130 aa2.34□□□□□ -2.03
NUP54-206ENST00000508465 A8MUU9 505 aa2.33□□□□□ -2.04
NUP54-206ENST00000508465 C9JAW5 83 aa2.33□□□□□ -2.04
NUP54-206ENST00000508465 ATXN8Q156A1 80 aa2.33□□□□□ -2.04
NUP54-206ENST00000508465 C20orf166-AS1Q96NR2 134 aa2.33□□□□□ -2.04
NUP54-206ENST00000508465 DSCR8Q96T75 97 aa2.33□□□□□ -2.04
NUP54-206ENST00000508465 PRO0628Q9UI54 55 aa2.33□□□□□ -2.04
NUP54-206ENST00000508465 TSTD3H0UI37 97 aa2.32□□□□□ -2.04
NUP54-206ENST00000508465 M0R2T5 61 aa2.32□□□□□ -2.04
NUP54-206ENST00000508465 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
NUP54-206ENST00000508465 FLGP20930 4061 aaPredicted RBP2.32□□□□□ -2.04
NUP54-206ENST00000508465 Q6ZQT0 140 aa2.31□□□□□ -2.04
NUP54-206ENST00000508465 C14orf132Q9NPU4 83 aa2.31□□□□□ -2.04
NUP54-206ENST00000508465 A0A1B0GVX0 72 aa2.3□□□□□ -2.04
NUP54-206ENST00000508465 TAX1BP3O14907 124 aa2.3□□□□□ -2.04
NUP54-206ENST00000508465 ANAPC13Q9BS18 74 aa2.3□□□□□ -2.04
NUP54-206ENST00000508465 TRBV20-1A0A075B6N2 111 aa2.29□□□□□ -2.04
NUP54-206ENST00000508465 LOC110117498A0A087WWA1 95 aa2.29□□□□□ -2.04
NUP54-206ENST00000508465 A0A1W2PPM0 123 aa2.29□□□□□ -2.04
NUP54-206ENST00000508465 JMJD7-PLA2G4BH0Y9G9 81 aa2.29□□□□□ -2.04
NUP54-206ENST00000508465 IGKV3D-7A0A0C4DH55 119 aa2.28□□□□□ -2.04
NUP54-206ENST00000508465 NREPQ16612 68 aa2.28□□□□□ -2.04
NUP54-206ENST00000508465 C8orf87E5RJ46 101 aa2.27□□□□□ -2.05
NUP54-206ENST00000508465 J3KT08 172 aa2.27□□□□□ -2.05
NUP54-206ENST00000508465 NDUFB1O75438 58 aa2.27□□□□□ -2.05
NUP54-206ENST00000508465 LYRM7Q5U5X0 104 aa2.27□□□□□ -2.05
NUP54-206ENST00000508465 C8orf17Q9NRJ1 99 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms