RNA–Protein interactions for RNA: ENST00000505732.5

TTC39B-204, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,881 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-204ENST00000505732 NOTCH2NLQ7Z3S9 236 aa12.14□□□□□ -0.47
TTC39B-204ENST00000505732 OXTP01178 125 aa12.12□□□□□ -0.47
TTC39B-204ENST00000505732 SMR3BP02814 79 aaPredicted RBP12.12□□□□□ -0.47
TTC39B-204ENST00000505732 H0Y9P7 68 aa12.12□□□□□ -0.47
TTC39B-204ENST00000505732 ATP5EP56381 51 aaPredicted RBP12.1□□□□□ -0.47
TTC39B-204ENST00000505732 LINC00208Q96KT6 92 aa12.1□□□□□ -0.47
TTC39B-204ENST00000505732 KMT2CQ8NEZ4 4911 aaKnown RBP12.1□□□□□ -0.47
TTC39B-204ENST00000505732 Q5XG85 94 aa12.08□□□□□ -0.48
TTC39B-204ENST00000505732 SERP1Q9Y6X1 66 aa12.08□□□□□ -0.48
TTC39B-204ENST00000505732 MRPL34Q9BQ48 92 aaKnown RBP12.07□□□□□ -0.48
TTC39B-204ENST00000505732 TYMSOSQ8TAI1 123 aa12.06□□□□□ -0.48
TTC39B-204ENST00000505732 TP53AIP1Q9HCN2 124 aa12.06□□□□□ -0.48
TTC39B-204ENST00000505732 H3BPC8 53 aa12.05□□□□□ -0.48
TTC39B-204ENST00000505732 APOBP04114 4563 aaKnown RBP12.05□□□□□ -0.48
TTC39B-204ENST00000505732 TRAV22A0A0B4J277 110 aa12.04□□□□□ -0.48
TTC39B-204ENST00000505732 NDUFS5O43920 106 aa12.04□□□□□ -0.48
TTC39B-204ENST00000505732 C1orf195Q5TG92 126 aa12.04□□□□□ -0.48
TTC39B-204ENST00000505732 C1orf64Q8NEQ6 169 aa12.01□□□□□ -0.49
TTC39B-204ENST00000505732 C4orf48Q5BLP8 95 aa12□□□□□ -0.49
TTC39B-204ENST00000505732 LIMD2Q9BT23 127 aa12□□□□□ -0.49
TTC39B-204ENST00000505732 FAT1Q14517 4588 aa11.99□□□□□ -0.49
TTC39B-204ENST00000505732 PRR26Q8N8Z3 221 aa11.98□□□□□ -0.49
TTC39B-204ENST00000505732 C8orf87E5RJ46 101 aa11.97□□□□□ -0.49
TTC39B-204ENST00000505732 KRTAP10-4P60372 401 aaPredicted RBP11.97□□□□□ -0.49
TTC39B-204ENST00000505732 SPINK1P00995 79 aa11.95□□□□□ -0.5
TTC39B-204ENST00000505732 LINC00313P59037 77 aa11.93□□□□□ -0.5
TTC39B-204ENST00000505732 PRR4Q16378 134 aa11.9□□□□□ -0.5
TTC39B-204ENST00000505732 LINC00304Q8N9R0 145 aa11.89□□□□□ -0.51
TTC39B-204ENST00000505732 CYP4F30PQ9H0H9 118 aa11.86□□□□□ -0.51
TTC39B-204ENST00000505732 Q5W150 140 aa11.85□□□□□ -0.51
TTC39B-204ENST00000505732 SPANXA2-OT1Q8N9U9 137 aa11.85□□□□□ -0.51
TTC39B-204ENST00000505732 SPAG11AQ6PDA7 123 aa11.84□□□□□ -0.51
TTC39B-204ENST00000505732 SMIM26A0A096LP01 95 aa11.83□□□□□ -0.52
TTC39B-204ENST00000505732 RPS29P62273 56 aaKnown RBP11.82□□□□□ -0.52
TTC39B-204ENST00000505732 PCOTHQ58A44 107 aa11.81□□□□□ -0.52
TTC39B-204ENST00000505732 Q8N9P0 234 aaPredicted RBP11.81□□□□□ -0.52
TTC39B-204ENST00000505732 KRTAP13-3Q3SY46 172 aa11.8□□□□□ -0.52
TTC39B-204ENST00000505732 KRTAP16-1A8MUX0 517 aa11.8□□□□□ -0.52
TTC39B-204ENST00000505732 FP248Q71RG6 208 aaPredicted RBP11.78□□□□□ -0.52
TTC39B-204ENST00000505732 RYR3Q15413 4870 aa11.77□□□□□ -0.53
TTC39B-204ENST00000505732 PKHD1L1Q86WI1 4243 aa11.76□□□□□ -0.53
TTC39B-204ENST00000505732 IGLV7-46A0A075B6I9 117 aa11.74□□□□□ -0.53
TTC39B-204ENST00000505732 LOC101927531A0A1B0GV80 90 aa11.74□□□□□ -0.53
TTC39B-204ENST00000505732 C4orf26Q17RF5 130 aa11.74□□□□□ -0.53
TTC39B-204ENST00000505732 FAM229AH3BQW9 127 aa11.72□□□□□ -0.53
TTC39B-204ENST00000505732 RETNLBQ9BQ08 111 aa11.7□□□□□ -0.54
TTC39B-204ENST00000505732 HSPG2P98160 4391 aa11.66□□□□□ -0.54
TTC39B-204ENST00000505732 Q5VSD8 79 aa11.63□□□□□ -0.55
TTC39B-204ENST00000505732 MPLKIPQ8TAP9 179 aa11.63□□□□□ -0.55
TTC39B-204ENST00000505732 IGKV2-30P06310 120 aa11.57□□□□□ -0.56
TTC39B-204ENST00000505732 RYR1P21817 5038 aa11.56□□□□□ -0.56
TTC39B-204ENST00000505732 COA5Q86WW8 74 aa11.55□□□□□ -0.56
TTC39B-204ENST00000505732 Q8N1X5 172 aa11.53□□□□□ -0.56
TTC39B-204ENST00000505732 LRP1Q07954 4544 aaKnown RBP11.52□□□□□ -0.56
TTC39B-204ENST00000505732 C9orf92A6NGG3 77 aa11.51□□□□□ -0.57
TTC39B-204ENST00000505732 HRES1P13985 223 aa11.51□□□□□ -0.57
TTC39B-204ENST00000505732 TNXBP22105 4242 aa11.51□□□□□ -0.57
TTC39B-204ENST00000505732 KRTAP10-8P60410 259 aa11.51□□□□□ -0.57
TTC39B-204ENST00000505732 KRTAP17-1Q9BYP8 105 aa11.51□□□□□ -0.57
TTC39B-204ENST00000505732 Q1T7F1 81 aa11.5□□□□□ -0.57
TTC39B-204ENST00000505732 IGKV2D-30A0A075B6S6 120 aa11.47□□□□□ -0.57
TTC39B-204ENST00000505732 FLG2Q5D862 2391 aaPredicted RBP11.47□□□□□ -0.57
TTC39B-204ENST00000505732 C20orf166-AS1Q96NR2 134 aa11.42□□□□□ -0.58
TTC39B-204ENST00000505732 A8MUU9 505 aa11.41□□□□□ -0.58
TTC39B-204ENST00000505732 KIAA1109Q2LD37 5005 aa11.41□□□□□ -0.58
TTC39B-204ENST00000505732 FAT3Q8TDW7 4589 aa11.39□□□□□ -0.59
TTC39B-204ENST00000505732 ACYP2P14621 99 aa11.38□□□□□ -0.59
TTC39B-204ENST00000505732 DMAC1Q96GE9 116 aa11.38□□□□□ -0.59
TTC39B-204ENST00000505732 V9GYY9 64 aa11.38□□□□□ -0.59
TTC39B-204ENST00000505732 PSPHP1O15172 72 aa11.34□□□□□ -0.59
TTC39B-204ENST00000505732 C7orf65Q6ZTY9 151 aa11.34□□□□□ -0.59
TTC39B-204ENST00000505732 EPPK1P58107 5090 aaKnown RBP11.34□□□□□ -0.59
TTC39B-204ENST00000505732 A8MUN3 132 aa11.29□□□□□ -0.6
TTC39B-204ENST00000505732 DMBT1Q9UGM3 2413 aaPredicted RBP11.26□□□□□ -0.61
TTC39B-204ENST00000505732 MT1HL1P0DM35 61 aa11.25□□□□□ -0.61
TTC39B-204ENST00000505732 Q75L30 129 aa11.25□□□□□ -0.61
TTC39B-204ENST00000505732 MYCBP2O75592 4640 aa11.24□□□□□ -0.61
TTC39B-204ENST00000505732 CHKB-CPT1BH3BT56 60 aa11.23□□□□□ -0.61
TTC39B-204ENST00000505732 PRR15LQ9BU68 103 aa11.21□□□□□ -0.61
TTC39B-204ENST00000505732 Q5VV11 94 aa11.21□□□□□ -0.62
TTC39B-204ENST00000505732 LINC01558Q9Y6Z2 57 aa11.2□□□□□ -0.62
TTC39B-204ENST00000505732 BRK1Q8WUW1 75 aa11.18□□□□□ -0.62
TTC39B-204ENST00000505732 SPINK7P58062 85 aa11.15□□□□□ -0.62
TTC39B-204ENST00000505732 SVIPQ8NHG7 77 aa11.15□□□□□ -0.62
TTC39B-204ENST00000505732 PRO0628Q9UI54 55 aa11.1□□□□□ -0.63
TTC39B-204ENST00000505732 ATP11AUNQ6ZP68 121 aa11.08□□□□□ -0.64
TTC39B-204ENST00000505732 XP32Q5T750 250 aa11.07□□□□□ -0.64
TTC39B-204ENST00000505732 KRTAP4-5Q9BYR2 181 aa11.06□□□□□ -0.64
TTC39B-204ENST00000505732 RPL37P61927 97 aaKnown RBP11.06□□□□□ -0.64
TTC39B-204ENST00000505732 KRTAP3-1Q9BYR8 98 aa11.02□□□□□ -0.65
TTC39B-204ENST00000505732 A6NED7 52 aa10.95□□□□□ -0.66
TTC39B-204ENST00000505732 A0A1B0GU69 56 aa10.91□□□□□ -0.66
TTC39B-204ENST00000505732 A8MU10 97 aa10.91□□□□□ -0.66
TTC39B-204ENST00000505732 COX6B2Q6YFQ2 88 aa10.91□□□□□ -0.66
TTC39B-204ENST00000505732 TPRXLQ17RH7 258 aa10.86□□□□□ -0.67
TTC39B-204ENST00000505732 LCA10Q71F78 164 aa10.86□□□□□ -0.67
TTC39B-204ENST00000505732 SPTSSBQ8NFR3 76 aa10.83□□□□□ -0.68
TTC39B-204ENST00000505732 ABCA13Q86UQ4 5058 aa10.81□□□□□ -0.68
TTC39B-204ENST00000505732 CDC42SE1Q9NRR8 79 aa10.79□□□□□ -0.68
TTC39B-204ENST00000505732 LRP2P98164 4655 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms