RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 KRTAP10-4P60372 401 aaPredicted RBP14.34□□□□□ -0.11
DHFR-203ENST00000505337 CASC2Q6XLA1 102 aa14.33□□□□□ -0.12
DHFR-203ENST00000505337 ASB16-AS1Q495Z4 193 aa14.32□□□□□ -0.12
DHFR-203ENST00000505337 TMEM254Q8TBM7 123 aa14.32□□□□□ -0.12
DHFR-203ENST00000505337 SNURFQ9Y675 71 aa14.3□□□□□ -0.12
DHFR-203ENST00000505337 TMEM258P61165 79 aa14.29□□□□□ -0.12
DHFR-203ENST00000505337 FLG2Q5D862 2391 aaPredicted RBP14.28□□□□□ -0.12
DHFR-203ENST00000505337 A0A1B0GVX0 72 aa14.28□□□□□ -0.12
DHFR-203ENST00000505337 Q5XG85 94 aa14.27□□□□□ -0.13
DHFR-203ENST00000505337 A0A0U1RQV1 116 aa14.26□□□□□ -0.13
DHFR-203ENST00000505337 H7BZZ5 65 aa14.25□□□□□ -0.13
DHFR-203ENST00000505337 C8orf17Q9NRJ1 99 aa14.24□□□□□ -0.13
DHFR-203ENST00000505337 hDV103S1A0JD37 113 aa14.22□□□□□ -0.13
DHFR-203ENST00000505337 IGHV6-1A0A0B4J1U7 121 aa14.21□□□□□ -0.14
DHFR-203ENST00000505337 NDUFC1O43677 76 aa14.18□□□□□ -0.14
DHFR-203ENST00000505337 TYMSOSQ8TAI1 123 aa14.18□□□□□ -0.14
DHFR-203ENST00000505337 PKHD1L1Q86WI1 4243 aa14.18□□□□□ -0.14
DHFR-203ENST00000505337 C5orf47Q569G3 176 aa14.18□□□□□ -0.14
DHFR-203ENST00000505337 LIMD2Q9BT23 127 aa14.15□□□□□ -0.14
DHFR-203ENST00000505337 LRP1Q07954 4544 aaKnown RBP14.13□□□□□ -0.15
DHFR-203ENST00000505337 ZCCHC13Q8WW36 166 aaKnown RBP14.13□□□□□ -0.15
DHFR-203ENST00000505337 HERC1Q15751 4861 aa14.13□□□□□ -0.15
DHFR-203ENST00000505337 C1orf195Q5TG92 126 aa14.12□□□□□ -0.15
DHFR-203ENST00000505337 NOTCH2NLQ7Z3S9 236 aa14.12□□□□□ -0.15
DHFR-203ENST00000505337 DMBT1Q9UGM3 2413 aaPredicted RBP14.12□□□□□ -0.15
DHFR-203ENST00000505337 PRR26Q8N8Z3 221 aa14.12□□□□□ -0.15
DHFR-203ENST00000505337 FAT3Q8TDW7 4589 aa14.08□□□□□ -0.15
DHFR-203ENST00000505337 SPINK1P00995 79 aa14.08□□□□□ -0.16
DHFR-203ENST00000505337 FAM236DA0A1B0GTK5 79 aa14.07□□□□□ -0.16
DHFR-203ENST00000505337 FAM236CP0DP71 79 aa14.07□□□□□ -0.16
DHFR-203ENST00000505337 C4orf48Q5BLP8 95 aa14.07□□□□□ -0.16
DHFR-203ENST00000505337 MRPL34Q9BQ48 92 aaKnown RBP14.07□□□□□ -0.16
DHFR-203ENST00000505337 C8orf87E5RJ46 101 aa14.04□□□□□ -0.16
DHFR-203ENST00000505337 MP68P56378 58 aa14.04□□□□□ -0.16
DHFR-203ENST00000505337 LINC00304Q8N9R0 145 aa14.04□□□□□ -0.16
DHFR-203ENST00000505337 H0Y9P7 68 aa14.03□□□□□ -0.16
DHFR-203ENST00000505337 RPS29P62273 56 aaKnown RBP14.03□□□□□ -0.16
DHFR-203ENST00000505337 TP53AIP1Q9HCN2 124 aa14.03□□□□□ -0.16
DHFR-203ENST00000505337 TRAV22A0A0B4J277 110 aa14□□□□□ -0.17
DHFR-203ENST00000505337 H3BPC8 53 aa14□□□□□ -0.17
DHFR-203ENST00000505337 J3QL48 77 aa14□□□□□ -0.17
DHFR-203ENST00000505337 SPAG11AQ6PDA7 123 aa13.98□□□□□ -0.17
DHFR-203ENST00000505337 OXTP01178 125 aa13.98□□□□□ -0.17
DHFR-203ENST00000505337 ATP5EP56381 51 aaPredicted RBP13.96□□□□□ -0.17
DHFR-203ENST00000505337 LINC00208Q96KT6 92 aa13.96□□□□□ -0.17
DHFR-203ENST00000505337 NDUFS5O43920 106 aa13.94□□□□□ -0.18
DHFR-203ENST00000505337 RPS28P62857 69 aaKnown RBP13.94□□□□□ -0.18
DHFR-203ENST00000505337 LINC00313P59037 77 aa13.92□□□□□ -0.18
DHFR-203ENST00000505337 C1orf64Q8NEQ6 169 aa13.87□□□□□ -0.19
DHFR-203ENST00000505337 KRTAP16-1A8MUX0 517 aa13.86□□□□□ -0.19
DHFR-203ENST00000505337 MT1HL1P0DM35 61 aa13.84□□□□□ -0.19
DHFR-203ENST00000505337 Q8N9P0 234 aaPredicted RBP13.84□□□□□ -0.19
DHFR-203ENST00000505337 SERP1Q9Y6X1 66 aa13.83□□□□□ -0.2
DHFR-203ENST00000505337 KRTAP13-3Q3SY46 172 aa13.81□□□□□ -0.2
DHFR-203ENST00000505337 TNXBP22105 4242 aa13.81□□□□□ -0.2
DHFR-203ENST00000505337 Q5W150 140 aa13.77□□□□□ -0.21
DHFR-203ENST00000505337 SPANXA2-OT1Q8N9U9 137 aa13.72□□□□□ -0.21
DHFR-203ENST00000505337 CYP4F30PQ9H0H9 118 aa13.71□□□□□ -0.21
DHFR-203ENST00000505337 KRTAP10-8P60410 259 aa13.67□□□□□ -0.22
DHFR-203ENST00000505337 LOC101927531A0A1B0GV80 90 aa13.67□□□□□ -0.22
DHFR-203ENST00000505337 HMCN2Q8NDA2 5059 aa13.65□□□□□ -0.22
DHFR-203ENST00000505337 PRR4Q16378 134 aa13.63□□□□□ -0.23
DHFR-203ENST00000505337 PCOTHQ58A44 107 aa13.62□□□□□ -0.23
DHFR-203ENST00000505337 RETNLBQ9BQ08 111 aa13.58□□□□□ -0.24
DHFR-203ENST00000505337 IGLV7-46A0A075B6I9 117 aa13.57□□□□□ -0.24
DHFR-203ENST00000505337 IGKV2-30P06310 120 aa13.51□□□□□ -0.25
DHFR-203ENST00000505337 SMIM26A0A096LP01 95 aa13.5□□□□□ -0.25
DHFR-203ENST00000505337 C9orf92A6NGG3 77 aa13.48□□□□□ -0.25
DHFR-203ENST00000505337 C20orf166-AS1Q96NR2 134 aa13.47□□□□□ -0.25
DHFR-203ENST00000505337 A8MUU9 505 aa13.44□□□□□ -0.26
DHFR-203ENST00000505337 FP248Q71RG6 208 aaPredicted RBP13.44□□□□□ -0.26
DHFR-203ENST00000505337 HRES1P13985 223 aa13.36□□□□□ -0.27
DHFR-203ENST00000505337 IGKV2D-30A0A075B6S6 120 aa13.33□□□□□ -0.27
DHFR-203ENST00000505337 UBR4Q5T4S7 5183 aa13.32□□□□□ -0.28
DHFR-203ENST00000505337 COA5Q86WW8 74 aa13.32□□□□□ -0.28
DHFR-203ENST00000505337 C7orf65Q6ZTY9 151 aa13.27□□□□□ -0.28
DHFR-203ENST00000505337 Q75L30 129 aa13.27□□□□□ -0.28
DHFR-203ENST00000505337 LRP2P98164 4655 aa13.27□□□□□ -0.28
DHFR-203ENST00000505337 C4orf26Q17RF5 130 aa13.26□□□□□ -0.29
DHFR-203ENST00000505337 DMAC1Q96GE9 116 aa13.25□□□□□ -0.29
DHFR-203ENST00000505337 MPLKIPQ8TAP9 179 aa13.22□□□□□ -0.29
DHFR-203ENST00000505337 Q1T7F1 81 aa13.18□□□□□ -0.3
DHFR-203ENST00000505337 LPAP08519 4548 aa13.15□□□□□ -0.3
DHFR-203ENST00000505337 ACYP2P14621 99 aa13.15□□□□□ -0.3
DHFR-203ENST00000505337 XP32Q5T750 250 aa13.1□□□□□ -0.31
DHFR-203ENST00000505337 RPL37P61927 97 aaKnown RBP13.08□□□□□ -0.32
DHFR-203ENST00000505337 V9GYY9 64 aa13.05□□□□□ -0.32
DHFR-203ENST00000505337 SPINK7P58062 85 aa13.03□□□□□ -0.32
DHFR-203ENST00000505337 RNF213Q63HN8 5207 aa13□□□□□ -0.33
DHFR-203ENST00000505337 ATP11AUNQ6ZP68 121 aa12.99□□□□□ -0.33
DHFR-203ENST00000505337 A8MUN3 132 aa12.96□□□□□ -0.33
DHFR-203ENST00000505337 TPRXLQ17RH7 258 aa12.95□□□□□ -0.34
DHFR-203ENST00000505337 CHKB-CPT1BH3BT56 60 aa12.94□□□□□ -0.34
DHFR-203ENST00000505337 PSPHP1O15172 72 aa12.91□□□□□ -0.34
DHFR-203ENST00000505337 LINC01558Q9Y6Z2 57 aa12.89□□□□□ -0.35
DHFR-203ENST00000505337 KRTAP3-1Q9BYR8 98 aa12.85□□□□□ -0.35
DHFR-203ENST00000505337 Q5VV11 94 aa12.84□□□□□ -0.35
DHFR-203ENST00000505337 PRR15LQ9BU68 103 aa12.83□□□□□ -0.36
DHFR-203ENST00000505337 COX6B2Q6YFQ2 88 aa12.78□□□□□ -0.36
DHFR-203ENST00000505337 MUC2Q02817 5179 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms