RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-233ENST00000504203 CDK2AP2O75956 126 aa7.65□□□□□ -1.18
MATR3-233ENST00000504203 LRP1BQ9NZR2 4599 aa7.64□□□□□ -1.19
MATR3-233ENST00000504203 A0A087X002 238 aa7.64□□□□□ -1.19
MATR3-233ENST00000504203 PRR4Q16378 134 aa7.64□□□□□ -1.19
MATR3-233ENST00000504203 NOTCH2NLQ7Z3S9 236 aa7.64□□□□□ -1.19
MATR3-233ENST00000504203 SPANXA2-OT1Q8N9U9 137 aa7.64□□□□□ -1.19
MATR3-233ENST00000504203 MRPL34Q9BQ48 92 aaKnown RBP7.63□□□□□ -1.19
MATR3-233ENST00000504203 SPINK6Q6UWN8 80 aa7.6□□□□□ -1.19
MATR3-233ENST00000504203 MPLKIPQ8TAP9 179 aa7.6□□□□□ -1.19
MATR3-233ENST00000504203 KRTAP13-2Q52LG2 175 aa7.59□□□□□ -1.19
MATR3-233ENST00000504203 NDUFS5O43920 106 aa7.58□□□□□ -1.2
MATR3-233ENST00000504203 KRTAP1-4P0C5Y4 121 aa7.55□□□□□ -1.2
MATR3-233ENST00000504203 LINC00336Q6ZUF6 198 aa7.55□□□□□ -1.2
MATR3-233ENST00000504203 VPS13BQ7Z7G8 4022 aa7.55□□□□□ -1.2
MATR3-233ENST00000504203 IGLV7-46A0A075B6I9 117 aa7.55□□□□□ -1.2
MATR3-233ENST00000504203 Q1T7F1 81 aa7.55□□□□□ -1.2
MATR3-233ENST00000504203 C8orf87E5RJ46 101 aa7.52□□□□□ -1.2
MATR3-233ENST00000504203 PCOTHQ58A44 107 aa7.52□□□□□ -1.2
MATR3-233ENST00000504203 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
MATR3-233ENST00000504203 C1orf195Q5TG92 126 aa7.51□□□□□ -1.21
MATR3-233ENST00000504203 Q5W150 140 aa7.5□□□□□ -1.21
MATR3-233ENST00000504203 SACSQ9NZJ4 4579 aa7.49□□□□□ -1.21
MATR3-233ENST00000504203 PKHD1P08F94 4074 aa7.48□□□□□ -1.21
MATR3-233ENST00000504203 LINC00313P59037 77 aa7.47□□□□□ -1.21
MATR3-233ENST00000504203 LOC101927531A0A1B0GV80 90 aa7.46□□□□□ -1.22
MATR3-233ENST00000504203 Q8N9P0 234 aaPredicted RBP7.46□□□□□ -1.22
MATR3-233ENST00000504203 COA5Q86WW8 74 aa7.45□□□□□ -1.22
MATR3-233ENST00000504203 PRO0628Q9UI54 55 aa7.45□□□□□ -1.22
MATR3-233ENST00000504203 PLA2G1BP04054 148 aaKnown RBP7.44□□□□□ -1.22
MATR3-233ENST00000504203 LIMD2Q9BT23 127 aa7.44□□□□□ -1.22
MATR3-233ENST00000504203 V9GYY9 64 aa7.43□□□□□ -1.22
MATR3-233ENST00000504203 KRTAP16-1A8MUX0 517 aa7.42□□□□□ -1.22
MATR3-233ENST00000504203 TYMSOSQ8TAI1 123 aa7.4□□□□□ -1.22
MATR3-233ENST00000504203 PSPHP1O15172 72 aa7.4□□□□□ -1.23
MATR3-233ENST00000504203 BRK1Q8WUW1 75 aa7.4□□□□□ -1.23
MATR3-233ENST00000504203 FAM229AH3BQW9 127 aa7.39□□□□□ -1.23
MATR3-233ENST00000504203 SPINK1P00995 79 aa7.38□□□□□ -1.23
MATR3-233ENST00000504203 DYNC1H1Q14204 4646 aaKnown RBP7.38□□□□□ -1.23
MATR3-233ENST00000504203 A8MUN3 132 aa7.37□□□□□ -1.23
MATR3-233ENST00000504203 C4orf48Q5BLP8 95 aa7.37□□□□□ -1.23
MATR3-233ENST00000504203 HRES1P13985 223 aa7.37□□□□□ -1.23
MATR3-233ENST00000504203 A0A1B0GVY2 172 aa7.36□□□□□ -1.23
MATR3-233ENST00000504203 Q5VV11 94 aa7.34□□□□□ -1.23
MATR3-233ENST00000504203 PRR26Q8N8Z3 221 aa7.33□□□□□ -1.24
MATR3-233ENST00000504203 IGKV2-30P06310 120 aa7.32□□□□□ -1.24
MATR3-233ENST00000504203 RPS29P62273 56 aaKnown RBP7.32□□□□□ -1.24
MATR3-233ENST00000504203 RETNLBQ9BQ08 111 aa7.32□□□□□ -1.24
MATR3-233ENST00000504203 SMR3BP02814 79 aaPredicted RBP7.31□□□□□ -1.24
MATR3-233ENST00000504203 LINC00304Q8N9R0 145 aa7.31□□□□□ -1.24
MATR3-233ENST00000504203 APOBP04114 4563 aaKnown RBP7.3□□□□□ -1.24
MATR3-233ENST00000504203 KRTAP10-4P60372 401 aaPredicted RBP7.3□□□□□ -1.24
MATR3-233ENST00000504203 SPAG11AQ6PDA7 123 aa7.29□□□□□ -1.24
MATR3-233ENST00000504203 PRR15LQ9BU68 103 aa7.29□□□□□ -1.24
MATR3-233ENST00000504203 FAT1Q14517 4588 aa7.28□□□□□ -1.24
MATR3-233ENST00000504203 DMAC1Q96GE9 116 aa7.28□□□□□ -1.24
MATR3-233ENST00000504203 LINC01558Q9Y6Z2 57 aa7.28□□□□□ -1.24
MATR3-233ENST00000504203 PKHD1L1Q86WI1 4243 aa7.27□□□□□ -1.25
MATR3-233ENST00000504203 ACYP2P14621 99 aa7.26□□□□□ -1.25
MATR3-233ENST00000504203 Q75L30 129 aa7.25□□□□□ -1.25
MATR3-233ENST00000504203 RYR2Q92736 4967 aa7.24□□□□□ -1.25
MATR3-233ENST00000504203 CHKB-CPT1BH3BT56 60 aa7.23□□□□□ -1.25
MATR3-233ENST00000504203 IGKV2D-30A0A075B6S6 120 aa7.2□□□□□ -1.26
MATR3-233ENST00000504203 A8MU10 97 aa7.19□□□□□ -1.26
MATR3-233ENST00000504203 KMT2CQ8NEZ4 4911 aaKnown RBP7.17□□□□□ -1.26
MATR3-233ENST00000504203 A6NED7 52 aa7.14□□□□□ -1.27
MATR3-233ENST00000504203 LCA10Q71F78 164 aa7.13□□□□□ -1.27
MATR3-233ENST00000504203 C7orf65Q6ZTY9 151 aa7.12□□□□□ -1.27
MATR3-233ENST00000504203 C20orf166-AS1Q96NR2 134 aa7.12□□□□□ -1.27
MATR3-233ENST00000504203 A8MUU9 505 aa7.12□□□□□ -1.27
MATR3-233ENST00000504203 C9orf92A6NGG3 77 aa7.1□□□□□ -1.27
MATR3-233ENST00000504203 SPINK7P58062 85 aa7.09□□□□□ -1.27
MATR3-233ENST00000504203 CDC42SE1Q9NRR8 79 aa7.08□□□□□ -1.28
MATR3-233ENST00000504203 FLG2Q5D862 2391 aaPredicted RBP7.08□□□□□ -1.28
MATR3-233ENST00000504203 ATP11AUNQ6ZP68 121 aa7.04□□□□□ -1.28
MATR3-233ENST00000504203 HSPG2P98160 4391 aa7.03□□□□□ -1.28
MATR3-233ENST00000504203 TNXBP22105 4242 aa7.02□□□□□ -1.28
MATR3-233ENST00000504203 Q8N1X5 172 aa7.02□□□□□ -1.29
MATR3-233ENST00000504203 A0A1B0GU69 56 aa7.01□□□□□ -1.29
MATR3-233ENST00000504203 KRTAP10-8P60410 259 aa7.01□□□□□ -1.29
MATR3-233ENST00000504203 PMAIP1Q13794 54 aa7□□□□□ -1.29
MATR3-233ENST00000504203 SPTSSBQ8NFR3 76 aa7□□□□□ -1.29
MATR3-233ENST00000504203 LRP1Q07954 4544 aaKnown RBP6.99□□□□□ -1.29
MATR3-233ENST00000504203 Q5VSD8 79 aa6.98□□□□□ -1.29
MATR3-233ENST00000504203 FAT3Q8TDW7 4589 aa6.98□□□□□ -1.29
MATR3-233ENST00000504203 KRTAP3-1Q9BYR8 98 aa6.95□□□□□ -1.3
MATR3-233ENST00000504203 RYR3Q15413 4870 aa6.94□□□□□ -1.3
MATR3-233ENST00000504203 A6NN06 94 aa6.93□□□□□ -1.3
MATR3-233ENST00000504203 RYR1P21817 5038 aa6.92□□□□□ -1.3
MATR3-233ENST00000504203 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
MATR3-233ENST00000504203 SPATA8Q6RVD6 105 aa6.89□□□□□ -1.31
MATR3-233ENST00000504203 UQCR11O14957 56 aa6.88□□□□□ -1.31
MATR3-233ENST00000504203 DMBT1Q9UGM3 2413 aaPredicted RBP6.87□□□□□ -1.31
MATR3-233ENST00000504203 MIR22HGQ0VDD5 57 aa6.84□□□□□ -1.31
MATR3-233ENST00000504203 COX6B2Q6YFQ2 88 aa6.84□□□□□ -1.31
MATR3-233ENST00000504203 KTN1-AS1Q86SY8 53 aa6.84□□□□□ -1.32
MATR3-233ENST00000504203 RPL37P61927 97 aaKnown RBP6.82□□□□□ -1.32
MATR3-233ENST00000504203 KIAA1109Q2LD37 5005 aa6.82□□□□□ -1.32
MATR3-233ENST00000504203 MT1HL1P0DM35 61 aa6.81□□□□□ -1.32
MATR3-233ENST00000504203 SEC61GP60059 68 aa6.81□□□□□ -1.32
MATR3-233ENST00000504203 XP32Q5T750 250 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms