RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 SPINK1P00995 79 aa12.68□□□□□ -0.38
PTPN13-205ENST00000502971 C20orf197Q8N268 126 aa12.68□□□□□ -0.38
PTPN13-205ENST00000502971 HERC2O95714 4834 aa12.67□□□□□ -0.38
PTPN13-205ENST00000502971 C8orf17Q9NRJ1 99 aa12.67□□□□□ -0.38
PTPN13-205ENST00000502971 IGHV6-1A0A0B4J1U7 121 aa12.66□□□□□ -0.38
PTPN13-205ENST00000502971 KRTAP17-1Q9BYP8 105 aa12.66□□□□□ -0.38
PTPN13-205ENST00000502971 hDV103S1A0JD37 113 aa12.65□□□□□ -0.38
PTPN13-205ENST00000502971 SPAG11AQ6PDA7 123 aa12.65□□□□□ -0.38
PTPN13-205ENST00000502971 LINC00304Q8N9R0 145 aa12.64□□□□□ -0.39
PTPN13-205ENST00000502971 C1orf195Q5TG92 126 aa12.63□□□□□ -0.39
PTPN13-205ENST00000502971 RPS29P62273 56 aaKnown RBP12.62□□□□□ -0.39
PTPN13-205ENST00000502971 KLKP1Q107X0 134 aa12.62□□□□□ -0.39
PTPN13-205ENST00000502971 TMEM254Q8TBM7 123 aa12.59□□□□□ -0.39
PTPN13-205ENST00000502971 CYSTM1Q9H1C7 97 aa12.59□□□□□ -0.39
PTPN13-205ENST00000502971 C5orf47Q569G3 176 aa12.57□□□□□ -0.4
PTPN13-205ENST00000502971 C8orf87E5RJ46 101 aa12.56□□□□□ -0.4
PTPN13-205ENST00000502971 SNURFQ9Y675 71 aa12.55□□□□□ -0.4
PTPN13-205ENST00000502971 A0A0U1RQV1 116 aa12.54□□□□□ -0.4
PTPN13-205ENST00000502971 PKHD1L1Q86WI1 4243 aa12.54□□□□□ -0.4
PTPN13-205ENST00000502971 NOTCH2NLQ7Z3S9 236 aa12.53□□□□□ -0.4
PTPN13-205ENST00000502971 MRPL34Q9BQ48 92 aaKnown RBP12.53□□□□□ -0.4
PTPN13-205ENST00000502971 NDUFC1O43677 76 aa12.5□□□□□ -0.41
PTPN13-205ENST00000502971 TP53AIP1Q9HCN2 124 aa12.5□□□□□ -0.41
PTPN13-205ENST00000502971 TMEM258P61165 79 aa12.48□□□□□ -0.41
PTPN13-205ENST00000502971 KRTAP4-5Q9BYR2 181 aa12.48□□□□□ -0.41
PTPN13-205ENST00000502971 MP68P56378 58 aa12.46□□□□□ -0.41
PTPN13-205ENST00000502971 LINC00313P59037 77 aa12.46□□□□□ -0.41
PTPN13-205ENST00000502971 H7BZZ5 65 aa12.45□□□□□ -0.42
PTPN13-205ENST00000502971 NDUFS5O43920 106 aa12.42□□□□□ -0.42
PTPN13-205ENST00000502971 H3BPC8 53 aa12.42□□□□□ -0.42
PTPN13-205ENST00000502971 ZCCHC13Q8WW36 166 aaKnown RBP12.42□□□□□ -0.42
PTPN13-205ENST00000502971 H0Y9P7 68 aa12.41□□□□□ -0.42
PTPN13-205ENST00000502971 TRAV22A0A0B4J277 110 aa12.4□□□□□ -0.43
PTPN13-205ENST00000502971 ABCA13Q86UQ4 5058 aa12.39□□□□□ -0.43
PTPN13-205ENST00000502971 KRTAP10-8P60410 259 aa12.37□□□□□ -0.43
PTPN13-205ENST00000502971 LINC00208Q96KT6 92 aa12.35□□□□□ -0.43
PTPN13-205ENST00000502971 PCLOQ9Y6V0 5065 aa12.34□□□□□ -0.43
PTPN13-205ENST00000502971 Q8N9P0 234 aaPredicted RBP12.33□□□□□ -0.44
PTPN13-205ENST00000502971 KRTAP16-1A8MUX0 517 aa12.32□□□□□ -0.44
PTPN13-205ENST00000502971 FAM236DA0A1B0GTK5 79 aa12.31□□□□□ -0.44
PTPN13-205ENST00000502971 FAM236CP0DP71 79 aa12.31□□□□□ -0.44
PTPN13-205ENST00000502971 OXTP01178 125 aa12.3□□□□□ -0.44
PTPN13-205ENST00000502971 C1orf64Q8NEQ6 169 aa12.3□□□□□ -0.44
PTPN13-205ENST00000502971 FLG2Q5D862 2391 aaPredicted RBP12.3□□□□□ -0.44
PTPN13-205ENST00000502971 ATP5EP56381 51 aaPredicted RBP12.26□□□□□ -0.45
PTPN13-205ENST00000502971 LRP1Q07954 4544 aaKnown RBP12.25□□□□□ -0.45
PTPN13-205ENST00000502971 MYCBP2O75592 4640 aa12.23□□□□□ -0.45
PTPN13-205ENST00000502971 FAT3Q8TDW7 4589 aa12.22□□□□□ -0.45
PTPN13-205ENST00000502971 KRTAP13-3Q3SY46 172 aa12.21□□□□□ -0.45
PTPN13-205ENST00000502971 Q5W150 140 aa12.2□□□□□ -0.46
PTPN13-205ENST00000502971 TNXBP22105 4242 aa12.2□□□□□ -0.46
PTPN13-205ENST00000502971 RETNLBQ9BQ08 111 aa12.18□□□□□ -0.46
PTPN13-205ENST00000502971 RPS28P62857 69 aaKnown RBP12.17□□□□□ -0.46
PTPN13-205ENST00000502971 MT1HL1P0DM35 61 aa12.16□□□□□ -0.46
PTPN13-205ENST00000502971 LOC101927531A0A1B0GV80 90 aa12.15□□□□□ -0.46
PTPN13-205ENST00000502971 SPANXA2-OT1Q8N9U9 137 aa12.11□□□□□ -0.47
PTPN13-205ENST00000502971 SERP1Q9Y6X1 66 aa12.1□□□□□ -0.47
PTPN13-205ENST00000502971 C9orf92A6NGG3 77 aa12.08□□□□□ -0.47
PTPN13-205ENST00000502971 FP248Q71RG6 208 aaPredicted RBP12.08□□□□□ -0.47
PTPN13-205ENST00000502971 PCOTHQ58A44 107 aa12.05□□□□□ -0.48
PTPN13-205ENST00000502971 C20orf166-AS1Q96NR2 134 aa12.05□□□□□ -0.48
PTPN13-205ENST00000502971 CYP4F30PQ9H0H9 118 aa12.05□□□□□ -0.48
PTPN13-205ENST00000502971 A8MUU9 505 aa12.03□□□□□ -0.48
PTPN13-205ENST00000502971 DMBT1Q9UGM3 2413 aaPredicted RBP12.03□□□□□ -0.48
PTPN13-205ENST00000502971 J3QL48 77 aa12.03□□□□□ -0.48
PTPN13-205ENST00000502971 IGLV7-46A0A075B6I9 117 aa12□□□□□ -0.49
PTPN13-205ENST00000502971 IGKV2-30P06310 120 aa12□□□□□ -0.49
PTPN13-205ENST00000502971 PRR4Q16378 134 aa11.98□□□□□ -0.49
PTPN13-205ENST00000502971 Q75L30 129 aa11.91□□□□□ -0.5
PTPN13-205ENST00000502971 IGKV2D-30A0A075B6S6 120 aa11.88□□□□□ -0.51
PTPN13-205ENST00000502971 HRES1P13985 223 aa11.85□□□□□ -0.51
PTPN13-205ENST00000502971 HERC1Q15751 4861 aa11.85□□□□□ -0.51
PTPN13-205ENST00000502971 C7orf65Q6ZTY9 151 aa11.84□□□□□ -0.51
PTPN13-205ENST00000502971 SMIM26A0A096LP01 95 aa11.81□□□□□ -0.52
PTPN13-205ENST00000502971 XP32Q5T750 250 aa11.77□□□□□ -0.53
PTPN13-205ENST00000502971 RPL37P61927 97 aaKnown RBP11.75□□□□□ -0.53
PTPN13-205ENST00000502971 ATP11AUNQ6ZP68 121 aa11.73□□□□□ -0.53
PTPN13-205ENST00000502971 COA5Q86WW8 74 aa11.73□□□□□ -0.53
PTPN13-205ENST00000502971 DMAC1Q96GE9 116 aa11.72□□□□□ -0.53
PTPN13-205ENST00000502971 TPRXLQ17RH7 258 aa11.7□□□□□ -0.54
PTPN13-205ENST00000502971 ACYP2P14621 99 aa11.69□□□□□ -0.54
PTPN13-205ENST00000502971 SPINK7P58062 85 aa11.66□□□□□ -0.54
PTPN13-205ENST00000502971 A8MUN3 132 aa11.56□□□□□ -0.56
PTPN13-205ENST00000502971 C4orf26Q17RF5 130 aa11.55□□□□□ -0.56
PTPN13-205ENST00000502971 MPLKIPQ8TAP9 179 aa11.55□□□□□ -0.56
PTPN13-205ENST00000502971 Q1T7F1 81 aa11.54□□□□□ -0.56
PTPN13-205ENST00000502971 CHKB-CPT1BH3BT56 60 aa11.5□□□□□ -0.57
PTPN13-205ENST00000502971 V9GYY9 64 aa11.5□□□□□ -0.57
PTPN13-205ENST00000502971 HMCN2Q8NDA2 5059 aa11.46□□□□□ -0.58
PTPN13-205ENST00000502971 COX6B2Q6YFQ2 88 aa11.42□□□□□ -0.58
PTPN13-205ENST00000502971 KRTAP3-1Q9BYR8 98 aa11.4□□□□□ -0.58
PTPN13-205ENST00000502971 LPAP08519 4548 aa11.35□□□□□ -0.59
PTPN13-205ENST00000502971 LINC01558Q9Y6Z2 57 aa11.35□□□□□ -0.59
PTPN13-205ENST00000502971 SEC61BP60468 96 aaKnown RBP11.29□□□□□ -0.6
PTPN13-205ENST00000502971 PSPHP1O15172 72 aa11.29□□□□□ -0.6
PTPN13-205ENST00000502971 LRP2P98164 4655 aa11.28□□□□□ -0.6
PTPN13-205ENST00000502971 SPTSSBQ8NFR3 76 aa11.25□□□□□ -0.61
PTPN13-205ENST00000502971 PRR15LQ9BU68 103 aa11.25□□□□□ -0.61
PTPN13-205ENST00000502971 Q5VV11 94 aa11.2□□□□□ -0.62
PTPN13-205ENST00000502971 UBR4Q5T4S7 5183 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms