RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 MRPL34Q9BQ48 92 aaKnown RBP13.64□□□□□ -0.23
SNF8-202ENST00000502492 FRAS1Q86XX4 4008 aa13.63□□□□□ -0.23
SNF8-202ENST00000502492 A8MUN3 132 aa13.62□□□□□ -0.23
SNF8-202ENST00000502492 Q8N9P0 234 aaPredicted RBP13.62□□□□□ -0.23
SNF8-202ENST00000502492 CD164Q04900 197 aa13.62□□□□□ -0.23
SNF8-202ENST00000502492 A0A087X002 238 aa13.61□□□□□ -0.23
SNF8-202ENST00000502492 PCOTHQ58A44 107 aa13.61□□□□□ -0.23
SNF8-202ENST00000502492 NOTCH2NLQ7Z3S9 236 aa13.61□□□□□ -0.23
SNF8-202ENST00000502492 NDUFS5O43920 106 aa13.61□□□□□ -0.23
SNF8-202ENST00000502492 IGLV7-43P04211 117 aa13.61□□□□□ -0.23
SNF8-202ENST00000502492 C1orf195Q5TG92 126 aa13.6□□□□□ -0.23
SNF8-202ENST00000502492 KMT2CQ8NEZ4 4911 aaKnown RBP13.59□□□□□ -0.23
SNF8-202ENST00000502492 COA5Q86WW8 74 aa13.59□□□□□ -0.23
SNF8-202ENST00000502492 LIMD2Q9BT23 127 aa13.57□□□□□ -0.24
SNF8-202ENST00000502492 Q5VV11 94 aa13.56□□□□□ -0.24
SNF8-202ENST00000502492 RYR2Q92736 4967 aa13.54□□□□□ -0.24
SNF8-202ENST00000502492 SPINK6Q6UWN8 80 aa13.48□□□□□ -0.25
SNF8-202ENST00000502492 CIRBP-AS1Q8TBR5 109 aa13.48□□□□□ -0.25
SNF8-202ENST00000502492 SSBP3-AS1Q7Z2R9 100 aa13.47□□□□□ -0.25
SNF8-202ENST00000502492 FAT2Q9NYQ8 4349 aa13.45□□□□□ -0.26
SNF8-202ENST00000502492 PRR15LQ9BU68 103 aa13.45□□□□□ -0.26
SNF8-202ENST00000502492 KRTAP13-3Q3SY46 172 aa13.44□□□□□ -0.26
SNF8-202ENST00000502492 LOC101927531A0A1B0GV80 90 aa13.43□□□□□ -0.26
SNF8-202ENST00000502492 Q5W150 140 aa13.42□□□□□ -0.26
SNF8-202ENST00000502492 DNAH11Q96DT5 4516 aa13.4□□□□□ -0.26
SNF8-202ENST00000502492 CHKB-CPT1BH3BT56 60 aa13.4□□□□□ -0.26
SNF8-202ENST00000502492 HRES1P13985 223 aa13.39□□□□□ -0.27
SNF8-202ENST00000502492 C8orf87E5RJ46 101 aa13.38□□□□□ -0.27
SNF8-202ENST00000502492 KRTAP10-2P60368 255 aa13.38□□□□□ -0.27
SNF8-202ENST00000502492 Q75L30 129 aa13.38□□□□□ -0.27
SNF8-202ENST00000502492 RYR3Q15413 4870 aa13.35□□□□□ -0.27
SNF8-202ENST00000502492 A8MU10 97 aa13.33□□□□□ -0.28
SNF8-202ENST00000502492 LINC01558Q9Y6Z2 57 aa13.33□□□□□ -0.28
SNF8-202ENST00000502492 PKD1P98161 4303 aa13.31□□□□□ -0.28
SNF8-202ENST00000502492 SPAG11AQ6PDA7 123 aa13.3□□□□□ -0.28
SNF8-202ENST00000502492 DNAH5Q8TE73 4624 aa13.3□□□□□ -0.28
SNF8-202ENST00000502492 KRTAP13-2Q52LG2 175 aa13.29□□□□□ -0.28
SNF8-202ENST00000502492 Q6ZSA8 131 aa13.27□□□□□ -0.28
SNF8-202ENST00000502492 LINC00313P59037 77 aa13.27□□□□□ -0.29
SNF8-202ENST00000502492 A0A1B0GVY2 172 aa13.23□□□□□ -0.29
SNF8-202ENST00000502492 LCA10Q71F78 164 aa13.22□□□□□ -0.29
SNF8-202ENST00000502492 A6NED7 52 aa13.21□□□□□ -0.29
SNF8-202ENST00000502492 KRTAP10-1P60331 282 aa13.21□□□□□ -0.29
SNF8-202ENST00000502492 FAM229AH3BQW9 127 aa13.19□□□□□ -0.3
SNF8-202ENST00000502492 PMAIP1Q13794 54 aa13.17□□□□□ -0.3
SNF8-202ENST00000502492 PKHD1P08F94 4074 aa13.16□□□□□ -0.3
SNF8-202ENST00000502492 ACYP2P14621 99 aa13.16□□□□□ -0.3
SNF8-202ENST00000502492 KRTAP1-4P0C5Y4 121 aa13.14□□□□□ -0.31
SNF8-202ENST00000502492 PRR26Q8N8Z3 221 aa13.14□□□□□ -0.31
SNF8-202ENST00000502492 KRTAP16-1A8MUX0 517 aa13.13□□□□□ -0.31
SNF8-202ENST00000502492 DMAC1Q96GE9 116 aa13.13□□□□□ -0.31
SNF8-202ENST00000502492 LRP1BQ9NZR2 4599 aa13.13□□□□□ -0.31
SNF8-202ENST00000502492 CDC42SE1Q9NRR8 79 aa13.12□□□□□ -0.31
SNF8-202ENST00000502492 ATP11AUNQ6ZP68 121 aa13.11□□□□□ -0.31
SNF8-202ENST00000502492 IGKV2-30P06310 120 aa13.1□□□□□ -0.31
SNF8-202ENST00000502492 RETNLBQ9BQ08 111 aa13.07□□□□□ -0.32
SNF8-202ENST00000502492 DYNC1H1Q14204 4646 aaKnown RBP13.07□□□□□ -0.32
SNF8-202ENST00000502492 SPTSSBQ8NFR3 76 aa13.05□□□□□ -0.32
SNF8-202ENST00000502492 SPINK7P58062 85 aa13.04□□□□□ -0.32
SNF8-202ENST00000502492 VPS13BQ7Z7G8 4022 aa12.97□□□□□ -0.33
SNF8-202ENST00000502492 PLA2G1BP04054 148 aaKnown RBP12.97□□□□□ -0.33
SNF8-202ENST00000502492 C4orf48Q5BLP8 95 aa12.94□□□□□ -0.34
SNF8-202ENST00000502492 A6NN06 94 aa12.93□□□□□ -0.34
SNF8-202ENST00000502492 TYMSOSQ8TAI1 123 aa12.93□□□□□ -0.34
SNF8-202ENST00000502492 SPINK1P00995 79 aa12.93□□□□□ -0.34
SNF8-202ENST00000502492 APOBP04114 4563 aaKnown RBP12.9□□□□□ -0.34
SNF8-202ENST00000502492 IGKV2D-30A0A075B6S6 120 aa12.88□□□□□ -0.35
SNF8-202ENST00000502492 KTN1-AS1Q86SY8 53 aa12.87□□□□□ -0.35
SNF8-202ENST00000502492 EPPK1P58107 5090 aaKnown RBP12.85□□□□□ -0.35
SNF8-202ENST00000502492 SEC61GP60059 68 aa12.82□□□□□ -0.36
SNF8-202ENST00000502492 A0A1B0GU69 56 aa12.79□□□□□ -0.36
SNF8-202ENST00000502492 RPS29P62273 56 aaKnown RBP12.79□□□□□ -0.36
SNF8-202ENST00000502492 LINC00304Q8N9R0 145 aa12.76□□□□□ -0.37
SNF8-202ENST00000502492 C7orf65Q6ZTY9 151 aa12.76□□□□□ -0.37
SNF8-202ENST00000502492 SMR3BP02814 79 aaPredicted RBP12.75□□□□□ -0.37
SNF8-202ENST00000502492 FAT1Q14517 4588 aa12.69□□□□□ -0.38
SNF8-202ENST00000502492 RYR1P21817 5038 aa12.69□□□□□ -0.38
SNF8-202ENST00000502492 HSPG2P98160 4391 aa12.68□□□□□ -0.38
SNF8-202ENST00000502492 SPATA8Q6RVD6 105 aa12.65□□□□□ -0.38
SNF8-202ENST00000502492 KIAA1109Q2LD37 5005 aa12.64□□□□□ -0.39
SNF8-202ENST00000502492 KRTAP10-4P60372 401 aaPredicted RBP12.59□□□□□ -0.39
SNF8-202ENST00000502492 UQCR11O14957 56 aa12.59□□□□□ -0.39
SNF8-202ENST00000502492 Q8N1X5 172 aa12.57□□□□□ -0.4
SNF8-202ENST00000502492 MIR22HGQ0VDD5 57 aa12.55□□□□□ -0.4
SNF8-202ENST00000502492 RBM12B-AS1Q9P1G2 102 aa12.54□□□□□ -0.4
SNF8-202ENST00000502492 C20orf166-AS1Q96NR2 134 aa12.53□□□□□ -0.4
SNF8-202ENST00000502492 A8MUU9 505 aa12.53□□□□□ -0.4
SNF8-202ENST00000502492 Q5VSD8 79 aa12.53□□□□□ -0.4
SNF8-202ENST00000502492 BIRC6Q9NR09 4857 aa12.52□□□□□ -0.41
SNF8-202ENST00000502492 KRTAP17-1Q9BYP8 105 aa12.51□□□□□ -0.41
SNF8-202ENST00000502492 C9orf92A6NGG3 77 aa12.48□□□□□ -0.41
SNF8-202ENST00000502492 PKHD1L1Q86WI1 4243 aa12.47□□□□□ -0.41
SNF8-202ENST00000502492 KRTAP3-1Q9BYR8 98 aa12.36□□□□□ -0.43
SNF8-202ENST00000502492 HERC2O95714 4834 aa12.3□□□□□ -0.44
SNF8-202ENST00000502492 PRAC1Q96KF2 57 aa12.27□□□□□ -0.45
SNF8-202ENST00000502492 KRTAP4-5Q9BYR2 181 aa12.26□□□□□ -0.45
SNF8-202ENST00000502492 ADM2Q7Z4H4 148 aa12.26□□□□□ -0.45
SNF8-202ENST00000502492 FLG2Q5D862 2391 aaPredicted RBP12.19□□□□□ -0.46
SNF8-202ENST00000502492 LRP1Q07954 4544 aaKnown RBP12.18□□□□□ -0.46
SNF8-202ENST00000502492 H0YAA0 97 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms