RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 A8MWP4 228 aa4.98□□□□□ -1.61
VPS13B-206ENST00000496144 HYDINQ4G0P3 5121 aa4.98□□□□□ -1.61
VPS13B-206ENST00000496144 NDUFB1O75438 58 aa4.97□□□□□ -1.61
VPS13B-206ENST00000496144 CD164Q04900 197 aa4.97□□□□□ -1.61
VPS13B-206ENST00000496144 ATP5EP56381 51 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-206ENST00000496144 DMBT1Q9UGM3 2413 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-206ENST00000496144 PRR15Q8IV56 129 aa4.97□□□□□ -1.61
VPS13B-206ENST00000496144 M0R2T5 61 aa4.96□□□□□ -1.62
VPS13B-206ENST00000496144 RPS29P62273 56 aaKnown RBP4.96□□□□□ -1.62
VPS13B-206ENST00000496144 SERP1Q9Y6X1 66 aa4.95□□□□□ -1.62
VPS13B-206ENST00000496144 DYNC1H1Q14204 4646 aaKnown RBP4.95□□□□□ -1.62
VPS13B-206ENST00000496144 C5orf47Q569G3 176 aa4.94□□□□□ -1.62
VPS13B-206ENST00000496144 ZCCHC13Q8WW36 166 aaKnown RBP4.94□□□□□ -1.62
VPS13B-206ENST00000496144 FLG2Q5D862 2391 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-206ENST00000496144 WFDC13Q8IUB5 93 aa4.93□□□□□ -1.62
VPS13B-206ENST00000496144 CASC2Q6XLA1 102 aa4.93□□□□□ -1.62
VPS13B-206ENST00000496144 PKHD1L1Q86WI1 4243 aa4.93□□□□□ -1.62
VPS13B-206ENST00000496144 MMP24-AS1A0A0U1RRL7 71 aa4.93□□□□□ -1.62
VPS13B-206ENST00000496144 C9orf92A6NGG3 77 aa4.93□□□□□ -1.62
VPS13B-206ENST00000496144 TPRXLQ17RH7 258 aa4.91□□□□□ -1.62
VPS13B-206ENST00000496144 MT1HL1P0DM35 61 aa4.91□□□□□ -1.62
VPS13B-206ENST00000496144 ASB16-AS1Q495Z4 193 aa4.91□□□□□ -1.62
VPS13B-206ENST00000496144 A0A087X002 238 aa4.91□□□□□ -1.62
VPS13B-206ENST00000496144 KRTAP10-4P60372 401 aaPredicted RBP4.9□□□□□ -1.62
VPS13B-206ENST00000496144 hDV103S1A0JD37 113 aa4.88□□□□□ -1.63
VPS13B-206ENST00000496144 RYR3Q15413 4870 aa4.88□□□□□ -1.63
VPS13B-206ENST00000496144 Q5XG85 94 aa4.88□□□□□ -1.63
VPS13B-206ENST00000496144 KRTAP1-4P0C5Y4 121 aa4.88□□□□□ -1.63
VPS13B-206ENST00000496144 KMT2CQ8NEZ4 4911 aaKnown RBP4.88□□□□□ -1.63
VPS13B-206ENST00000496144 A0A1B0GVX0 72 aa4.88□□□□□ -1.63
VPS13B-206ENST00000496144 H3BPC8 53 aa4.88□□□□□ -1.63
VPS13B-206ENST00000496144 C8orf17Q9NRJ1 99 aa4.87□□□□□ -1.63
VPS13B-206ENST00000496144 PKHD1P08F94 4074 aa4.87□□□□□ -1.63
VPS13B-206ENST00000496144 TRAV22A0A0B4J277 110 aa4.87□□□□□ -1.63
VPS13B-206ENST00000496144 H0Y9P7 68 aa4.87□□□□□ -1.63
VPS13B-206ENST00000496144 MP68P56378 58 aa4.86□□□□□ -1.63
VPS13B-206ENST00000496144 VPS13BQ7Z7G8 4022 aa4.86□□□□□ -1.63
VPS13B-206ENST00000496144 HERC2O95714 4834 aa4.86□□□□□ -1.63
VPS13B-206ENST00000496144 IGHV6-1A0A0B4J1U7 121 aa4.85□□□□□ -1.63
VPS13B-206ENST00000496144 RBM12B-AS1Q9P1G2 102 aa4.85□□□□□ -1.63
VPS13B-206ENST00000496144 KRTAP13-2Q52LG2 175 aa4.84□□□□□ -1.63
VPS13B-206ENST00000496144 NDUFS5O43920 106 aa4.84□□□□□ -1.63
VPS13B-206ENST00000496144 TP53AIP1Q9HCN2 124 aa4.84□□□□□ -1.63
VPS13B-206ENST00000496144 LRP1BQ9NZR2 4599 aa4.83□□□□□ -1.64
VPS13B-206ENST00000496144 CYP4F30PQ9H0H9 118 aa4.82□□□□□ -1.64
VPS13B-206ENST00000496144 LINC00208Q96KT6 92 aa4.82□□□□□ -1.64
VPS13B-206ENST00000496144 MRPL34Q9BQ48 92 aaKnown RBP4.82□□□□□ -1.64
VPS13B-206ENST00000496144 SMIM26A0A096LP01 95 aa4.81□□□□□ -1.64
VPS13B-206ENST00000496144 APOBP04114 4563 aaKnown RBP4.81□□□□□ -1.64
VPS13B-206ENST00000496144 C4orf26Q17RF5 130 aa4.81□□□□□ -1.64
VPS13B-206ENST00000496144 C1orf64Q8NEQ6 169 aa4.81□□□□□ -1.64
VPS13B-206ENST00000496144 SPANXA2-OT1Q8N9U9 137 aa4.81□□□□□ -1.64
VPS13B-206ENST00000496144 LINC00313P59037 77 aa4.8□□□□□ -1.64
VPS13B-206ENST00000496144 NOTCH2NLQ7Z3S9 236 aa4.8□□□□□ -1.64
VPS13B-206ENST00000496144 C8orf87E5RJ46 101 aa4.79□□□□□ -1.64
VPS13B-206ENST00000496144 SVIPQ8NHG7 77 aa4.78□□□□□ -1.64
VPS13B-206ENST00000496144 PCOTHQ58A44 107 aa4.77□□□□□ -1.65
VPS13B-206ENST00000496144 EPPK1P58107 5090 aaKnown RBP4.77□□□□□ -1.65
VPS13B-206ENST00000496144 RYR1P21817 5038 aa4.77□□□□□ -1.65
VPS13B-206ENST00000496144 KRTAP13-3Q3SY46 172 aa4.75□□□□□ -1.65
VPS13B-206ENST00000496144 C1orf195Q5TG92 126 aa4.75□□□□□ -1.65
VPS13B-206ENST00000496144 SRRM2Q9UQ35 2752 aaKnown RBP4.74□□□□□ -1.65
VPS13B-206ENST00000496144 KRTAP16-1A8MUX0 517 aa4.72□□□□□ -1.65
VPS13B-206ENST00000496144 Q1T7F1 81 aa4.72□□□□□ -1.65
VPS13B-206ENST00000496144 LOC101927531A0A1B0GV80 90 aa4.71□□□□□ -1.66
VPS13B-206ENST00000496144 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
VPS13B-206ENST00000496144 Q5W150 140 aa4.7□□□□□ -1.66
VPS13B-206ENST00000496144 Q8N9P0 234 aaPredicted RBP4.7□□□□□ -1.66
VPS13B-206ENST00000496144 HSPG2P98160 4391 aa4.7□□□□□ -1.66
VPS13B-206ENST00000496144 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
VPS13B-206ENST00000496144 XP32Q5T750 250 aa4.67□□□□□ -1.66
VPS13B-206ENST00000496144 COA5Q86WW8 74 aa4.67□□□□□ -1.66
VPS13B-206ENST00000496144 KIAA1109Q2LD37 5005 aa4.66□□□□□ -1.66
VPS13B-206ENST00000496144 TNXBP22105 4242 aa4.65□□□□□ -1.66
VPS13B-206ENST00000496144 PCLOQ9Y6V0 5065 aa4.65□□□□□ -1.67
VPS13B-206ENST00000496144 V9GYY9 64 aa4.64□□□□□ -1.67
VPS13B-206ENST00000496144 IGKV2-30P06310 120 aa4.64□□□□□ -1.67
VPS13B-206ENST00000496144 Q75L30 129 aa4.64□□□□□ -1.67
VPS13B-206ENST00000496144 HRES1P13985 223 aa4.62□□□□□ -1.67
VPS13B-206ENST00000496144 FAT3Q8TDW7 4589 aa4.59□□□□□ -1.67
VPS13B-206ENST00000496144 DMAC1Q96GE9 116 aa4.59□□□□□ -1.68
VPS13B-206ENST00000496144 FAT1Q14517 4588 aa4.58□□□□□ -1.68
VPS13B-206ENST00000496144 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
VPS13B-206ENST00000496144 PSPHP1O15172 72 aa4.58□□□□□ -1.68
VPS13B-206ENST00000496144 Q5VV11 94 aa4.57□□□□□ -1.68
VPS13B-206ENST00000496144 ACYP2P14621 99 aa4.57□□□□□ -1.68
VPS13B-206ENST00000496144 BRK1Q8WUW1 75 aa4.56□□□□□ -1.68
VPS13B-206ENST00000496144 A8MUN3 132 aa4.56□□□□□ -1.68
VPS13B-206ENST00000496144 PRR15LQ9BU68 103 aa4.55□□□□□ -1.68
VPS13B-206ENST00000496144 LINC01558Q9Y6Z2 57 aa4.55□□□□□ -1.68
VPS13B-206ENST00000496144 IGKV2D-30A0A075B6S6 120 aa4.54□□□□□ -1.68
VPS13B-206ENST00000496144 C20orf166-AS1Q96NR2 134 aa4.54□□□□□ -1.68
VPS13B-206ENST00000496144 A8MUU9 505 aa4.53□□□□□ -1.68
VPS13B-206ENST00000496144 C7orf65Q6ZTY9 151 aa4.51□□□□□ -1.69
VPS13B-206ENST00000496144 CHKB-CPT1BH3BT56 60 aa4.5□□□□□ -1.69
VPS13B-206ENST00000496144 MYCBP2O75592 4640 aa4.49□□□□□ -1.69
VPS13B-206ENST00000496144 ABCA13Q86UQ4 5058 aa4.49□□□□□ -1.69
VPS13B-206ENST00000496144 SPINK7P58062 85 aa4.44□□□□□ -1.7
VPS13B-206ENST00000496144 A6NED7 52 aa4.42□□□□□ -1.7
VPS13B-206ENST00000496144 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms