RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 PMAIP1Q13794 54 aa7.75□□□□□ -1.17
PTPN7-217ENST00000495688 Q8N9P0 234 aaPredicted RBP7.75□□□□□ -1.17
PTPN7-217ENST00000495688 DNHD1Q96M86 4753 aa7.74□□□□□ -1.17
PTPN7-217ENST00000495688 ZNF861PO60384 105 aa7.74□□□□□ -1.17
PTPN7-217ENST00000495688 IGLV7-46A0A075B6I9 117 aa7.74□□□□□ -1.17
PTPN7-217ENST00000495688 Q5VV11 94 aa7.74□□□□□ -1.17
PTPN7-217ENST00000495688 ZNF706Q9Y5V0 76 aaPredicted RBP7.74□□□□□ -1.17
PTPN7-217ENST00000495688 COA5Q86WW8 74 aa7.73□□□□□ -1.17
PTPN7-217ENST00000495688 DNAH5Q8TE73 4624 aa7.73□□□□□ -1.17
PTPN7-217ENST00000495688 PLAC8Q9NZF1 115 aa7.73□□□□□ -1.17
PTPN7-217ENST00000495688 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
PTPN7-217ENST00000495688 SPINK6Q6UWN8 80 aa7.72□□□□□ -1.17
PTPN7-217ENST00000495688 CDK2AP2O75956 126 aa7.71□□□□□ -1.17
PTPN7-217ENST00000495688 Q6ZR54 194 aa7.71□□□□□ -1.17
PTPN7-217ENST00000495688 MRPL34Q9BQ48 92 aaKnown RBP7.7□□□□□ -1.18
PTPN7-217ENST00000495688 PRR15LQ9BU68 103 aa7.69□□□□□ -1.18
PTPN7-217ENST00000495688 LRP1BQ9NZR2 4599 aa7.68□□□□□ -1.18
PTPN7-217ENST00000495688 CHKB-CPT1BH3BT56 60 aa7.67□□□□□ -1.18
PTPN7-217ENST00000495688 CIRBP-AS1Q8TBR5 109 aa7.67□□□□□ -1.18
PTPN7-217ENST00000495688 LIMD2Q9BT23 127 aa7.66□□□□□ -1.18
PTPN7-217ENST00000495688 Q5W150 140 aa7.65□□□□□ -1.18
PTPN7-217ENST00000495688 IGLV7-43P04211 117 aa7.65□□□□□ -1.19
PTPN7-217ENST00000495688 SPAG11AQ6PDA7 123 aa7.63□□□□□ -1.19
PTPN7-217ENST00000495688 C1orf134Q5TEV5 83 aa7.62□□□□□ -1.19
PTPN7-217ENST00000495688 HRES1P13985 223 aa7.61□□□□□ -1.19
PTPN7-217ENST00000495688 LY6G6CO95867 125 aa7.59□□□□□ -1.19
PTPN7-217ENST00000495688 PKD1P98161 4303 aa7.58□□□□□ -1.2
PTPN7-217ENST00000495688 HYDINQ4G0P3 5121 aa7.58□□□□□ -1.2
PTPN7-217ENST00000495688 KRTAP10-2P60368 255 aa7.58□□□□□ -1.2
PTPN7-217ENST00000495688 LOC101927531A0A1B0GV80 90 aa7.57□□□□□ -1.2
PTPN7-217ENST00000495688 KRTAP13-3Q3SY46 172 aa7.57□□□□□ -1.2
PTPN7-217ENST00000495688 LCA10Q71F78 164 aa7.57□□□□□ -1.2
PTPN7-217ENST00000495688 Q75L30 129 aa7.56□□□□□ -1.2
PTPN7-217ENST00000495688 A6NED7 52 aa7.56□□□□□ -1.2
PTPN7-217ENST00000495688 FAT2Q9NYQ8 4349 aa7.56□□□□□ -1.2
PTPN7-217ENST00000495688 VPS13BQ7Z7G8 4022 aa7.55□□□□□ -1.2
PTPN7-217ENST00000495688 RETNLBQ9BQ08 111 aa7.54□□□□□ -1.2
PTPN7-217ENST00000495688 PRR26Q8N8Z3 221 aa7.54□□□□□ -1.2
PTPN7-217ENST00000495688 SPTSSBQ8NFR3 76 aa7.53□□□□□ -1.2
PTPN7-217ENST00000495688 LINC01558Q9Y6Z2 57 aa7.53□□□□□ -1.2
PTPN7-217ENST00000495688 H3BS24 57 aa7.52□□□□□ -1.21
PTPN7-217ENST00000495688 SSBP3-AS1Q7Z2R9 100 aa7.52□□□□□ -1.21
PTPN7-217ENST00000495688 KRTAP13-2Q52LG2 175 aa7.51□□□□□ -1.21
PTPN7-217ENST00000495688 RBM12B-AS1Q9P1G2 102 aa7.51□□□□□ -1.21
PTPN7-217ENST00000495688 LINC00313P59037 77 aa7.48□□□□□ -1.21
PTPN7-217ENST00000495688 SPINK7P58062 85 aa7.48□□□□□ -1.21
PTPN7-217ENST00000495688 C8orf87E5RJ46 101 aa7.46□□□□□ -1.21
PTPN7-217ENST00000495688 PKHD1P08F94 4074 aa7.46□□□□□ -1.22
PTPN7-217ENST00000495688 KRTAP10-1P60331 282 aa7.46□□□□□ -1.22
PTPN7-217ENST00000495688 CDC42SE1Q9NRR8 79 aa7.44□□□□□ -1.22
PTPN7-217ENST00000495688 ATP11AUNQ6ZP68 121 aa7.43□□□□□ -1.22
PTPN7-217ENST00000495688 ACYP2P14621 99 aa7.42□□□□□ -1.22
PTPN7-217ENST00000495688 FAM229AH3BQW9 127 aa7.41□□□□□ -1.22
PTPN7-217ENST00000495688 Q6ZSA8 131 aa7.41□□□□□ -1.22
PTPN7-217ENST00000495688 KRTAP1-4P0C5Y4 121 aa7.4□□□□□ -1.22
PTPN7-217ENST00000495688 KRTAP16-1A8MUX0 517 aa7.4□□□□□ -1.23
PTPN7-217ENST00000495688 DMAC1Q96GE9 116 aa7.4□□□□□ -1.23
PTPN7-217ENST00000495688 IGKV2-30P06310 120 aa7.38□□□□□ -1.23
PTPN7-217ENST00000495688 A6NN06 94 aa7.36□□□□□ -1.23
PTPN7-217ENST00000495688 IGKV2D-30A0A075B6S6 120 aa7.35□□□□□ -1.23
PTPN7-217ENST00000495688 KTN1-AS1Q86SY8 53 aa7.35□□□□□ -1.23
PTPN7-217ENST00000495688 PLA2G1BP04054 148 aaKnown RBP7.33□□□□□ -1.24
PTPN7-217ENST00000495688 FAT1Q14517 4588 aa7.31□□□□□ -1.24
PTPN7-217ENST00000495688 SACSQ9NZJ4 4579 aa7.3□□□□□ -1.24
PTPN7-217ENST00000495688 TYMSOSQ8TAI1 123 aa7.29□□□□□ -1.24
PTPN7-217ENST00000495688 A0A1B0GU69 56 aa7.27□□□□□ -1.25
PTPN7-217ENST00000495688 DYNC1H1Q14204 4646 aaKnown RBP7.26□□□□□ -1.25
PTPN7-217ENST00000495688 C7orf65Q6ZTY9 151 aa7.25□□□□□ -1.25
PTPN7-217ENST00000495688 SPINK1P00995 79 aa7.23□□□□□ -1.25
PTPN7-217ENST00000495688 Q8N1X5 172 aa7.2□□□□□ -1.26
PTPN7-217ENST00000495688 SMR3BP02814 79 aaPredicted RBP7.19□□□□□ -1.26
PTPN7-217ENST00000495688 LINC00304Q8N9R0 145 aa7.17□□□□□ -1.26
PTPN7-217ENST00000495688 APOBP04114 4563 aaKnown RBP7.16□□□□□ -1.26
PTPN7-217ENST00000495688 SPATA8Q6RVD6 105 aa7.14□□□□□ -1.27
PTPN7-217ENST00000495688 C9orf92A6NGG3 77 aa7.14□□□□□ -1.27
PTPN7-217ENST00000495688 PKHD1L1Q86WI1 4243 aa7.13□□□□□ -1.27
PTPN7-217ENST00000495688 MIR22HGQ0VDD5 57 aa7.13□□□□□ -1.27
PTPN7-217ENST00000495688 UQCR11O14957 56 aa7.13□□□□□ -1.27
PTPN7-217ENST00000495688 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
PTPN7-217ENST00000495688 PRAC1Q96KF2 57 aa7.12□□□□□ -1.27
PTPN7-217ENST00000495688 RPS29P62273 56 aaKnown RBP7.06□□□□□ -1.28
PTPN7-217ENST00000495688 LRP1Q07954 4544 aaKnown RBP7.03□□□□□ -1.28
PTPN7-217ENST00000495688 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
PTPN7-217ENST00000495688 KMT2CQ8NEZ4 4911 aaKnown RBP7.02□□□□□ -1.29
PTPN7-217ENST00000495688 A8MUU9 505 aa7.01□□□□□ -1.29
PTPN7-217ENST00000495688 KRTAP10-4P60372 401 aaPredicted RBP7.01□□□□□ -1.29
PTPN7-217ENST00000495688 C20orf166-AS1Q96NR2 134 aa7.01□□□□□ -1.29
PTPN7-217ENST00000495688 FLG2Q5D862 2391 aaPredicted RBP6.98□□□□□ -1.29
PTPN7-217ENST00000495688 HSPG2P98160 4391 aa6.97□□□□□ -1.29
PTPN7-217ENST00000495688 RYR2Q92736 4967 aa6.97□□□□□ -1.29
PTPN7-217ENST00000495688 FAT3Q8TDW7 4589 aa6.96□□□□□ -1.29
PTPN7-217ENST00000495688 MYCBP2O75592 4640 aa6.96□□□□□ -1.29
PTPN7-217ENST00000495688 A0A1B0GVY2 172 aa6.96□□□□□ -1.3
PTPN7-217ENST00000495688 LINC01554Q52M75 96 aa6.96□□□□□ -1.3
PTPN7-217ENST00000495688 H0YAA0 97 aa6.94□□□□□ -1.3
PTPN7-217ENST00000495688 TNXBP22105 4242 aa6.91□□□□□ -1.3
PTPN7-217ENST00000495688 CSAG1Q6PB30 78 aa6.87□□□□□ -1.31
PTPN7-217ENST00000495688 DMBT1Q9UGM3 2413 aaPredicted RBP6.86□□□□□ -1.31
PTPN7-217ENST00000495688 A0A1B0GU33 70 aa6.86□□□□□ -1.31
PTPN7-217ENST00000495688 H1FX-AS1Q4G0G2 97 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms