RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 ATP11AUNQ6ZP68 121 aa9.12□□□□□ -0.95
CALD1-222ENST00000495522 C8orf17Q9NRJ1 99 aa9.12□□□□□ -0.95
CALD1-222ENST00000495522 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
CALD1-222ENST00000495522 A8MUN3 132 aa9.11□□□□□ -0.95
CALD1-222ENST00000495522 CDK2AP2O75956 126 aa9.11□□□□□ -0.95
CALD1-222ENST00000495522 KRTAP10-2P60368 255 aa9.11□□□□□ -0.95
CALD1-222ENST00000495522 CIRBP-AS1Q8TBR5 109 aa9.1□□□□□ -0.95
CALD1-222ENST00000495522 DNAH11Q96DT5 4516 aa9.1□□□□□ -0.95
CALD1-222ENST00000495522 DNAH5Q8TE73 4624 aa9.1□□□□□ -0.95
CALD1-222ENST00000495522 PRR4Q16378 134 aa9.1□□□□□ -0.95
CALD1-222ENST00000495522 LIMD2Q9BT23 127 aa9.1□□□□□ -0.95
CALD1-222ENST00000495522 IGHV6-1A0A0B4J1U7 121 aa9.09□□□□□ -0.95
CALD1-222ENST00000495522 TP53AIP1Q9HCN2 124 aa9.09□□□□□ -0.95
CALD1-222ENST00000495522 ALMS1Q8TCU4 4167 aa9.08□□□□□ -0.96
CALD1-222ENST00000495522 SPANXA2-OT1Q8N9U9 137 aa9.06□□□□□ -0.96
CALD1-222ENST00000495522 A6NN06 94 aa9.05□□□□□ -0.96
CALD1-222ENST00000495522 SSBP3-AS1Q7Z2R9 100 aa9.04□□□□□ -0.96
CALD1-222ENST00000495522 Q6ZSA8 131 aa9.03□□□□□ -0.96
CALD1-222ENST00000495522 CHKB-CPT1BH3BT56 60 aa9.02□□□□□ -0.97
CALD1-222ENST00000495522 MRPL34Q9BQ48 92 aaKnown RBP9.02□□□□□ -0.97
CALD1-222ENST00000495522 C7orf65Q6ZTY9 151 aa9.02□□□□□ -0.97
CALD1-222ENST00000495522 PKD1P98161 4303 aa9.01□□□□□ -0.97
CALD1-222ENST00000495522 A8MU10 97 aa9□□□□□ -0.97
CALD1-222ENST00000495522 KRTAP10-1P60331 282 aa9□□□□□ -0.97
CALD1-222ENST00000495522 Q75L30 129 aa9□□□□□ -0.97
CALD1-222ENST00000495522 SPINK6Q6UWN8 80 aa9□□□□□ -0.97
CALD1-222ENST00000495522 A0A087X002 238 aa8.99□□□□□ -0.97
CALD1-222ENST00000495522 NOTCH2NLQ7Z3S9 236 aa8.99□□□□□ -0.97
CALD1-222ENST00000495522 Q8N9P0 234 aaPredicted RBP8.99□□□□□ -0.97
CALD1-222ENST00000495522 SPTSSBQ8NFR3 76 aa8.97□□□□□ -0.97
CALD1-222ENST00000495522 LOC101927531A0A1B0GV80 90 aa8.96□□□□□ -0.97
CALD1-222ENST00000495522 LCA10Q71F78 164 aa8.96□□□□□ -0.97
CALD1-222ENST00000495522 FAT2Q9NYQ8 4349 aa8.96□□□□□ -0.97
CALD1-222ENST00000495522 CDC42SE1Q9NRR8 79 aa8.95□□□□□ -0.98
CALD1-222ENST00000495522 HYDINQ4G0P3 5121 aa8.95□□□□□ -0.98
CALD1-222ENST00000495522 C8orf87E5RJ46 101 aa8.94□□□□□ -0.98
CALD1-222ENST00000495522 PRR15LQ9BU68 103 aa8.94□□□□□ -0.98
CALD1-222ENST00000495522 IGLV7-46A0A075B6I9 117 aa8.93□□□□□ -0.98
CALD1-222ENST00000495522 KRTAP13-2Q52LG2 175 aa8.93□□□□□ -0.98
CALD1-222ENST00000495522 LRP1BQ9NZR2 4599 aa8.93□□□□□ -0.98
CALD1-222ENST00000495522 PCOTHQ58A44 107 aa8.92□□□□□ -0.98
CALD1-222ENST00000495522 A6NED7 52 aa8.9□□□□□ -0.98
CALD1-222ENST00000495522 SACSQ9NZJ4 4579 aa8.88□□□□□ -0.99
CALD1-222ENST00000495522 KRTAP1-4P0C5Y4 121 aa8.86□□□□□ -0.99
CALD1-222ENST00000495522 COA5Q86WW8 74 aa8.84□□□□□ -0.99
CALD1-222ENST00000495522 KRTAP13-3Q3SY46 172 aa8.83□□□□□ -1
CALD1-222ENST00000495522 Q5W150 140 aa8.83□□□□□ -1
CALD1-222ENST00000495522 LINC00313P59037 77 aa8.83□□□□□ -1
CALD1-222ENST00000495522 VPS13BQ7Z7G8 4022 aa8.82□□□□□ -1
CALD1-222ENST00000495522 H3BS24 57 aa8.79□□□□□ -1
CALD1-222ENST00000495522 PLA2G1BP04054 148 aaKnown RBP8.78□□□□□ -1
CALD1-222ENST00000495522 LINC01558Q9Y6Z2 57 aa8.77□□□□□ -1.01
CALD1-222ENST00000495522 KMT2CQ8NEZ4 4911 aaKnown RBP8.76□□□□□ -1.01
CALD1-222ENST00000495522 RYR2Q92736 4967 aa8.75□□□□□ -1.01
CALD1-222ENST00000495522 FAM229AH3BQW9 127 aa8.75□□□□□ -1.01
CALD1-222ENST00000495522 TYMSOSQ8TAI1 123 aa8.75□□□□□ -1.01
CALD1-222ENST00000495522 KRTAP16-1A8MUX0 517 aa8.72□□□□□ -1.01
CALD1-222ENST00000495522 HRES1P13985 223 aa8.72□□□□□ -1.01
CALD1-222ENST00000495522 SPINK1P00995 79 aa8.71□□□□□ -1.01
CALD1-222ENST00000495522 PKHD1P08F94 4074 aa8.7□□□□□ -1.02
CALD1-222ENST00000495522 LINC01554Q52M75 96 aa8.69□□□□□ -1.02
CALD1-222ENST00000495522 RETNLBQ9BQ08 111 aa8.68□□□□□ -1.02
CALD1-222ENST00000495522 IGKV2-30P06310 120 aa8.65□□□□□ -1.02
CALD1-222ENST00000495522 DYNC1H1Q14204 4646 aaKnown RBP8.64□□□□□ -1.03
CALD1-222ENST00000495522 PRR26Q8N8Z3 221 aa8.63□□□□□ -1.03
CALD1-222ENST00000495522 LINC00304Q8N9R0 145 aa8.63□□□□□ -1.03
CALD1-222ENST00000495522 ACYP2P14621 99 aa8.63□□□□□ -1.03
CALD1-222ENST00000495522 RPS29P62273 56 aaKnown RBP8.63□□□□□ -1.03
CALD1-222ENST00000495522 SPAG11AQ6PDA7 123 aa8.63□□□□□ -1.03
CALD1-222ENST00000495522 A0A1B0GVY2 172 aa8.62□□□□□ -1.03
CALD1-222ENST00000495522 SMR3BP02814 79 aaPredicted RBP8.61□□□□□ -1.03
CALD1-222ENST00000495522 DMAC1Q96GE9 116 aa8.61□□□□□ -1.03
CALD1-222ENST00000495522 RYR3Q15413 4870 aa8.6□□□□□ -1.03
CALD1-222ENST00000495522 SPINK7P58062 85 aa8.59□□□□□ -1.03
CALD1-222ENST00000495522 IGKV2D-30A0A075B6S6 120 aa8.55□□□□□ -1.04
CALD1-222ENST00000495522 APOBP04114 4563 aaKnown RBP8.54□□□□□ -1.04
CALD1-222ENST00000495522 PRAC1Q96KF2 57 aa8.54□□□□□ -1.04
CALD1-222ENST00000495522 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.04
CALD1-222ENST00000495522 FAT1Q14517 4588 aa8.49□□□□□ -1.05
CALD1-222ENST00000495522 PKHD1L1Q86WI1 4243 aa8.48□□□□□ -1.05
CALD1-222ENST00000495522 ADM2Q7Z4H4 148 aa8.42□□□□□ -1.06
CALD1-222ENST00000495522 C9orf92A6NGG3 77 aa8.39□□□□□ -1.07
CALD1-222ENST00000495522 C20orf166-AS1Q96NR2 134 aa8.39□□□□□ -1.07
CALD1-222ENST00000495522 A8MUU9 505 aa8.38□□□□□ -1.07
CALD1-222ENST00000495522 SPATA8Q6RVD6 105 aa8.36□□□□□ -1.07
CALD1-222ENST00000495522 A0A1B0GU69 56 aa8.34□□□□□ -1.07
CALD1-222ENST00000495522 Q8N1X5 172 aa8.31□□□□□ -1.08
CALD1-222ENST00000495522 EPPK1P58107 5090 aaKnown RBP8.3□□□□□ -1.08
CALD1-222ENST00000495522 CSAG1Q6PB30 78 aa8.26□□□□□ -1.09
CALD1-222ENST00000495522 FLG2Q5D862 2391 aaPredicted RBP8.23□□□□□ -1.09
CALD1-222ENST00000495522 HSPG2P98160 4391 aa8.23□□□□□ -1.09
CALD1-222ENST00000495522 UQCR11O14957 56 aa8.22□□□□□ -1.09
CALD1-222ENST00000495522 MIR22HGQ0VDD5 57 aa8.22□□□□□ -1.09
CALD1-222ENST00000495522 RYR1P21817 5038 aa8.22□□□□□ -1.09
CALD1-222ENST00000495522 Q5VSD8 79 aa8.21□□□□□ -1.09
CALD1-222ENST00000495522 KRTAP10-8P60410 259 aa8.21□□□□□ -1.1
CALD1-222ENST00000495522 TNXBP22105 4242 aa8.2□□□□□ -1.1
CALD1-222ENST00000495522 FAT3Q8TDW7 4589 aa8.2□□□□□ -1.1
CALD1-222ENST00000495522 KIAA1109Q2LD37 5005 aa8.19□□□□□ -1.1
CALD1-222ENST00000495522 LRP1Q07954 4544 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms