RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 SPINK6Q6UWN8 80 aa2.41□□□□□ -2.02
ATG3-207ENST00000494571 MRPL34Q9BQ48 92 aaKnown RBP2.41□□□□□ -2.02
ATG3-207ENST00000494571 ZANQ9Y493 2812 aa2.41□□□□□ -2.02
ATG3-207ENST00000494571 IGLV9-49A0A0B4J1Y8 123 aa2.4□□□□□ -2.02
ATG3-207ENST00000494571 IGLV7-43P04211 117 aa2.4□□□□□ -2.02
ATG3-207ENST00000494571 TLX1NBP0CAT3 122 aa2.4□□□□□ -2.03
ATG3-207ENST00000494571 SPRR1AP35321 89 aa2.4□□□□□ -2.03
ATG3-207ENST00000494571 X6R8D5 127 aa2.4□□□□□ -2.03
ATG3-207ENST00000494571 FBN3Q75N90 2809 aa2.4□□□□□ -2.03
ATG3-207ENST00000494571 HIVEP2P31629 2446 aa2.39□□□□□ -2.03
ATG3-207ENST00000494571 CFAP46Q8IYW2 2715 aa2.39□□□□□ -2.03
ATG3-207ENST00000494571 LRRK2Q5S007 2527 aa2.39□□□□□ -2.03
ATG3-207ENST00000494571 POLQO75417 2590 aa2.39□□□□□ -2.03
ATG3-207ENST00000494571 CCDC168Q8NDH2 2452 aa2.39□□□□□ -2.03
ATG3-207ENST00000494571 CHTF8P0CG12 524 aa2.38□□□□□ -2.03
ATG3-207ENST00000494571 KRTAP7-1Q8IUC3 87 aa2.38□□□□□ -2.03
ATG3-207ENST00000494571 A0A087WTM6 91 aa2.38□□□□□ -2.03
ATG3-207ENST00000494571 A0A1B0GVX0 72 aa2.38□□□□□ -2.03
ATG3-207ENST00000494571 NUPR2A6NF83 97 aa2.38□□□□□ -2.03
ATG3-207ENST00000494571 CEP295Q9C0D2 2601 aa2.38□□□□□ -2.03
ATG3-207ENST00000494571 DOPEY1Q5JWR5 2465 aa2.38□□□□□ -2.03
ATG3-207ENST00000494571 PSORS1C2Q9UIG4 136 aa2.38□□□□□ -2.03
ATG3-207ENST00000494571 IGSF10Q6WRI0 2623 aa2.37□□□□□ -2.03
ATG3-207ENST00000494571 MXRA5Q9NR99 2828 aa2.37□□□□□ -2.03
ATG3-207ENST00000494571 H0YAA0 97 aa2.37□□□□□ -2.03
ATG3-207ENST00000494571 K7ERS5 55 aa2.36□□□□□ -2.03
ATG3-207ENST00000494571 KRTAP11-1Q8IUC1 163 aa2.36□□□□□ -2.03
ATG3-207ENST00000494571 IGKV2D-30A0A075B6S6 120 aa2.36□□□□□ -2.03
ATG3-207ENST00000494571 IGKV2-30P06310 120 aa2.36□□□□□ -2.03
ATG3-207ENST00000494571 CHD8Q9HCK8 2581 aa2.36□□□□□ -2.03
ATG3-207ENST00000494571 TENM2Q9NT68 2774 aa2.36□□□□□ -2.03
ATG3-207ENST00000494571 HECTD1Q9ULT8 2610 aa2.35□□□□□ -2.03
ATG3-207ENST00000494571 DMBT1Q9UGM3 2413 aaPredicted RBP2.35□□□□□ -2.03
ATG3-207ENST00000494571 Q96NJ1 140 aa2.35□□□□□ -2.03
ATG3-207ENST00000494571 C10orf95Q9H7T3 257 aa2.35□□□□□ -2.03
ATG3-207ENST00000494571 HELZ2Q9BYK8 2649 aaKnown RBP2.35□□□□□ -2.03
ATG3-207ENST00000494571 ABCA12Q86UK0 2595 aa2.35□□□□□ -2.03
ATG3-207ENST00000494571 FBN1P35555 2871 aaKnown RBP2.34□□□□□ -2.03
ATG3-207ENST00000494571 Q6ZSA8 131 aa2.34□□□□□ -2.03
ATG3-207ENST00000494571 SPART-AS1P0CW21 52 aa2.34□□□□□ -2.04
ATG3-207ENST00000494571 ACANP16112 2415 aa2.33□□□□□ -2.04
ATG3-207ENST00000494571 KRTAP15-1Q3LI76 137 aa2.33□□□□□ -2.04
ATG3-207ENST00000494571 Q8N1X5 172 aa2.33□□□□□ -2.04
ATG3-207ENST00000494571 PANO1I0J062 215 aa2.32□□□□□ -2.04
ATG3-207ENST00000494571 COL7A1Q02388 2944 aa2.32□□□□□ -2.04
ATG3-207ENST00000494571 LY6G6CO95867 125 aa2.32□□□□□ -2.04
ATG3-207ENST00000494571 ANAPC11Q9NYG5 84 aa2.32□□□□□ -2.04
ATG3-207ENST00000494571 A0A1B0GU33 70 aa2.32□□□□□ -2.04
ATG3-207ENST00000494571 TPRXLQ17RH7 258 aa2.32□□□□□ -2.04
ATG3-207ENST00000494571 TYMSOSQ8TAI1 123 aa2.31□□□□□ -2.04
ATG3-207ENST00000494571 MAST4O15021 2626 aa2.31□□□□□ -2.04
ATG3-207ENST00000494571 TENM4Q6N022 2769 aa2.31□□□□□ -2.04
ATG3-207ENST00000494571 HIVEP1P15822 2718 aa2.31□□□□□ -2.04
ATG3-207ENST00000494571 C14orf177Q52M58 125 aa2.31□□□□□ -2.04
ATG3-207ENST00000494571 NBDYA0A0U1RRE5 68 aa2.3□□□□□ -2.04
ATG3-207ENST00000494571 KRTAP13-3Q3SY46 172 aa2.3□□□□□ -2.04
ATG3-207ENST00000494571 CIRBP-AS1Q8TBR5 109 aa2.3□□□□□ -2.04
ATG3-207ENST00000494571 PKD1L1Q8TDX9 2849 aa2.3□□□□□ -2.04
ATG3-207ENST00000494571 PDZD2O15018 2839 aa2.29□□□□□ -2.04
ATG3-207ENST00000494571 NOTCH2Q04721 2471 aa2.29□□□□□ -2.04
ATG3-207ENST00000494571 ALMS1Q8TCU4 4167 aa2.29□□□□□ -2.04
ATG3-207ENST00000494571 A0A0D9SG42 100 aa2.29□□□□□ -2.04
ATG3-207ENST00000494571 SEC61BP60468 96 aaKnown RBP2.29□□□□□ -2.04
ATG3-207ENST00000494571 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
ATG3-207ENST00000494571 TRRAPQ9Y4A5 3859 aa2.28□□□□□ -2.04
ATG3-207ENST00000494571 SPRR1BP22528 89 aa2.28□□□□□ -2.04
ATG3-207ENST00000494571 FASNP49327 2511 aaKnown RBP2.28□□□□□ -2.04
ATG3-207ENST00000494571 NBEAL1Q6ZS30 2694 aa2.28□□□□□ -2.04
ATG3-207ENST00000494571 KRTAP10-2P60368 255 aa2.27□□□□□ -2.05
ATG3-207ENST00000494571 LINC01556Q5JQF7 62 aa2.27□□□□□ -2.05
ATG3-207ENST00000494571 DNAH3Q8TD57 4116 aa2.27□□□□□ -2.05
ATG3-207ENST00000494571 KRTAP10-9P60411 292 aa2.27□□□□□ -2.05
ATG3-207ENST00000494571 KRTAP24-1Q3LI83 254 aa2.27□□□□□ -2.05
ATG3-207ENST00000494571 H1FX-AS1Q4G0G2 97 aa2.27□□□□□ -2.05
ATG3-207ENST00000494571 ATRQ13535 2644 aa2.26□□□□□ -2.05
ATG3-207ENST00000494571 ANK2Q01484 3957 aa2.25□□□□□ -2.05
ATG3-207ENST00000494571 APLNQ9ULZ1 77 aa2.24□□□□□ -2.05
ATG3-207ENST00000494571 VWFP04275 2813 aa2.24□□□□□ -2.05
ATG3-207ENST00000494571 TEP1Q99973 2627 aaKnown RBP2.23□□□□□ -2.05
ATG3-207ENST00000494571 NOTCH1P46531 2555 aa2.23□□□□□ -2.05
ATG3-207ENST00000494571 WWC2-AS2Q96NR7 200 aa2.22□□□□□ -2.05
ATG3-207ENST00000494571 COX6B2Q6YFQ2 88 aa2.22□□□□□ -2.05
ATG3-207ENST00000494571 RPL37P61927 97 aaKnown RBP2.21□□□□□ -2.05
ATG3-207ENST00000494571 TGP01266 2768 aa2.21□□□□□ -2.06
ATG3-207ENST00000494571 MEGF8Q7Z7M0 2845 aa2.21□□□□□ -2.06
ATG3-207ENST00000494571 ITPR3Q14573 2671 aa2.21□□□□□ -2.06
ATG3-207ENST00000494571 COL6A5A8TX70 2615 aa2.21□□□□□ -2.06
ATG3-207ENST00000494571 STAB2Q8WWQ8 2551 aa2.21□□□□□ -2.06
ATG3-207ENST00000494571 DYNC2H1Q8NCM8 4307 aaKnown RBP2.21□□□□□ -2.06
ATG3-207ENST00000494571 FLNCQ14315 2725 aa2.2□□□□□ -2.06
ATG3-207ENST00000494571 H3BNG1 76 aa2.19□□□□□ -2.06
ATG3-207ENST00000494571 KRTAP10-3P60369 221 aa2.19□□□□□ -2.06
ATG3-207ENST00000494571 TENM3Q9P273 2699 aa2.18□□□□□ -2.06
ATG3-207ENST00000494571 KRTAP13-1Q8IUC0 172 aa2.18□□□□□ -2.06
ATG3-207ENST00000494571 ITPR2Q14571 2701 aa2.18□□□□□ -2.06
ATG3-207ENST00000494571 BIRC6Q9NR09 4857 aa2.18□□□□□ -2.06
ATG3-207ENST00000494571 FLNAP21333 2647 aaKnown RBP2.18□□□□□ -2.06
ATG3-207ENST00000494571 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
ATG3-207ENST00000494571 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
ATG3-207ENST00000494571 DNHD1Q96M86 4753 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms