RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 PRR26Q8N8Z3 221 aa9.51□□□□□ -0.89
ATG4B-225ENST00000494465 A0A0U1RQV1 116 aa9.5□□□□□ -0.89
ATG4B-225ENST00000494465 CDK2AP2O75956 126 aa9.5□□□□□ -0.89
ATG4B-225ENST00000494465 NOTCH2NLQ7Z3S9 236 aa9.5□□□□□ -0.89
ATG4B-225ENST00000494465 HSPG2P98160 4391 aa9.49□□□□□ -0.89
ATG4B-225ENST00000494465 RPS28P62857 69 aaKnown RBP9.49□□□□□ -0.89
ATG4B-225ENST00000494465 H7BZZ5 65 aa9.49□□□□□ -0.89
ATG4B-225ENST00000494465 C1orf195Q5TG92 126 aa9.49□□□□□ -0.89
ATG4B-225ENST00000494465 PKHD1L1Q86WI1 4243 aa9.48□□□□□ -0.89
ATG4B-225ENST00000494465 TMEM258P61165 79 aa9.46□□□□□ -0.89
ATG4B-225ENST00000494465 LIMD2Q9BT23 127 aa9.44□□□□□ -0.9
ATG4B-225ENST00000494465 SPINK1P00995 79 aa9.44□□□□□ -0.9
ATG4B-225ENST00000494465 C4orf48Q5BLP8 95 aa9.43□□□□□ -0.9
ATG4B-225ENST00000494465 ZCCHC13Q8WW36 166 aaKnown RBP9.42□□□□□ -0.9
ATG4B-225ENST00000494465 RYR1P21817 5038 aa9.41□□□□□ -0.9
ATG4B-225ENST00000494465 LINC00304Q8N9R0 145 aa9.41□□□□□ -0.9
ATG4B-225ENST00000494465 NDUFC1O43677 76 aa9.41□□□□□ -0.9
ATG4B-225ENST00000494465 MRPL34Q9BQ48 92 aaKnown RBP9.4□□□□□ -0.9
ATG4B-225ENST00000494465 FAM229AH3BQW9 127 aa9.38□□□□□ -0.91
ATG4B-225ENST00000494465 RPS29P62273 56 aaKnown RBP9.38□□□□□ -0.91
ATG4B-225ENST00000494465 C8orf87E5RJ46 101 aa9.37□□□□□ -0.91
ATG4B-225ENST00000494465 SPAG11AQ6PDA7 123 aa9.37□□□□□ -0.91
ATG4B-225ENST00000494465 H0Y9P7 68 aa9.35□□□□□ -0.91
ATG4B-225ENST00000494465 KRTAP17-1Q9BYP8 105 aa9.35□□□□□ -0.91
ATG4B-225ENST00000494465 TP53AIP1Q9HCN2 124 aa9.35□□□□□ -0.91
ATG4B-225ENST00000494465 Q5VSD8 79 aa9.35□□□□□ -0.91
ATG4B-225ENST00000494465 MP68P56378 58 aa9.34□□□□□ -0.91
ATG4B-225ENST00000494465 TRAV22A0A0B4J277 110 aa9.33□□□□□ -0.92
ATG4B-225ENST00000494465 FAM236DA0A1B0GTK5 79 aa9.33□□□□□ -0.92
ATG4B-225ENST00000494465 FAM236CP0DP71 79 aa9.33□□□□□ -0.92
ATG4B-225ENST00000494465 LINC00313P59037 77 aa9.32□□□□□ -0.92
ATG4B-225ENST00000494465 LINC00208Q96KT6 92 aa9.32□□□□□ -0.92
ATG4B-225ENST00000494465 NDUFS5O43920 106 aa9.32□□□□□ -0.92
ATG4B-225ENST00000494465 EPPK1P58107 5090 aaKnown RBP9.31□□□□□ -0.92
ATG4B-225ENST00000494465 KIAA1109Q2LD37 5005 aa9.31□□□□□ -0.92
ATG4B-225ENST00000494465 LRP1Q07954 4544 aaKnown RBP9.31□□□□□ -0.92
ATG4B-225ENST00000494465 H3BPC8 53 aa9.3□□□□□ -0.92
ATG4B-225ENST00000494465 C4orf26Q17RF5 130 aa9.3□□□□□ -0.92
ATG4B-225ENST00000494465 TNXBP22105 4242 aa9.29□□□□□ -0.92
ATG4B-225ENST00000494465 KRTAP16-1A8MUX0 517 aa9.29□□□□□ -0.92
ATG4B-225ENST00000494465 OXTP01178 125 aa9.29□□□□□ -0.92
ATG4B-225ENST00000494465 C1orf64Q8NEQ6 169 aa9.27□□□□□ -0.93
ATG4B-225ENST00000494465 Q8N9P0 234 aaPredicted RBP9.26□□□□□ -0.93
ATG4B-225ENST00000494465 KRTAP13-3Q3SY46 172 aa9.24□□□□□ -0.93
ATG4B-225ENST00000494465 V9GYY9 64 aa9.24□□□□□ -0.93
ATG4B-225ENST00000494465 Q5W150 140 aa9.24□□□□□ -0.93
ATG4B-225ENST00000494465 ATP5EP56381 51 aaPredicted RBP9.23□□□□□ -0.93
ATG4B-225ENST00000494465 FAT3Q8TDW7 4589 aa9.22□□□□□ -0.93
ATG4B-225ENST00000494465 KRTAP10-8P60410 259 aa9.22□□□□□ -0.93
ATG4B-225ENST00000494465 FLG2Q5D862 2391 aaPredicted RBP9.22□□□□□ -0.93
ATG4B-225ENST00000494465 Q8N1X5 172 aa9.2□□□□□ -0.94
ATG4B-225ENST00000494465 PRO0628Q9UI54 55 aa9.17□□□□□ -0.94
ATG4B-225ENST00000494465 SERP1Q9Y6X1 66 aa9.17□□□□□ -0.94
ATG4B-225ENST00000494465 RETNLBQ9BQ08 111 aa9.15□□□□□ -0.95
ATG4B-225ENST00000494465 MYCBP2O75592 4640 aa9.12□□□□□ -0.95
ATG4B-225ENST00000494465 SPANXA2-OT1Q8N9U9 137 aa9.12□□□□□ -0.95
ATG4B-225ENST00000494465 PRR4Q16378 134 aa9.12□□□□□ -0.95
ATG4B-225ENST00000494465 CYP4F30PQ9H0H9 118 aa9.11□□□□□ -0.95
ATG4B-225ENST00000494465 LOC101927531A0A1B0GV80 90 aa9.1□□□□□ -0.95
ATG4B-225ENST00000494465 PCOTHQ58A44 107 aa9.1□□□□□ -0.95
ATG4B-225ENST00000494465 MT1HL1P0DM35 61 aa9.07□□□□□ -0.96
ATG4B-225ENST00000494465 C9orf92A6NGG3 77 aa9.07□□□□□ -0.96
ATG4B-225ENST00000494465 IGLV7-46A0A075B6I9 117 aa9.06□□□□□ -0.96
ATG4B-225ENST00000494465 DMBT1Q9UGM3 2413 aaPredicted RBP9.04□□□□□ -0.96
ATG4B-225ENST00000494465 IGKV2-30P06310 120 aa9.02□□□□□ -0.96
ATG4B-225ENST00000494465 C20orf166-AS1Q96NR2 134 aa9.02□□□□□ -0.97
ATG4B-225ENST00000494465 A8MUU9 505 aa9.01□□□□□ -0.97
ATG4B-225ENST00000494465 KRTAP4-5Q9BYR2 181 aa9□□□□□ -0.97
ATG4B-225ENST00000494465 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
ATG4B-225ENST00000494465 FP248Q71RG6 208 aaPredicted RBP8.95□□□□□ -0.98
ATG4B-225ENST00000494465 HRES1P13985 223 aa8.93□□□□□ -0.98
ATG4B-225ENST00000494465 IGKV2D-30A0A075B6S6 120 aa8.93□□□□□ -0.98
ATG4B-225ENST00000494465 Q75L30 129 aa8.89□□□□□ -0.99
ATG4B-225ENST00000494465 BRK1Q8WUW1 75 aa8.88□□□□□ -0.99
ATG4B-225ENST00000494465 COA5Q86WW8 74 aa8.87□□□□□ -0.99
ATG4B-225ENST00000494465 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
ATG4B-225ENST00000494465 BIRC6Q9NR09 4857 aa8.83□□□□□ -1
ATG4B-225ENST00000494465 ABCA13Q86UQ4 5058 aa8.83□□□□□ -1
ATG4B-225ENST00000494465 DMAC1Q96GE9 116 aa8.83□□□□□ -1
ATG4B-225ENST00000494465 HERC2O95714 4834 aa8.8□□□□□ -1
ATG4B-225ENST00000494465 XP32Q5T750 250 aa8.8□□□□□ -1
ATG4B-225ENST00000494465 MPLKIPQ8TAP9 179 aa8.8□□□□□ -1
ATG4B-225ENST00000494465 ACYP2P14621 99 aa8.77□□□□□ -1.01
ATG4B-225ENST00000494465 RPL37P61927 97 aaKnown RBP8.77□□□□□ -1.01
ATG4B-225ENST00000494465 Q1T7F1 81 aa8.76□□□□□ -1.01
ATG4B-225ENST00000494465 SPINK7P58062 85 aa8.75□□□□□ -1.01
ATG4B-225ENST00000494465 ATP11AUNQ6ZP68 121 aa8.72□□□□□ -1.01
ATG4B-225ENST00000494465 TPRXLQ17RH7 258 aa8.69□□□□□ -1.02
ATG4B-225ENST00000494465 H3BS24 57 aa8.68□□□□□ -1.02
ATG4B-225ENST00000494465 PMAIP1Q13794 54 aa8.68□□□□□ -1.02
ATG4B-225ENST00000494465 LPAP08519 4548 aa8.66□□□□□ -1.02
ATG4B-225ENST00000494465 LRP2P98164 4655 aa8.65□□□□□ -1.02
ATG4B-225ENST00000494465 KRTAP3-1Q9BYR8 98 aa8.64□□□□□ -1.03
ATG4B-225ENST00000494465 A8MUN3 132 aa8.63□□□□□ -1.03
ATG4B-225ENST00000494465 CHKB-CPT1BH3BT56 60 aa8.62□□□□□ -1.03
ATG4B-225ENST00000494465 J3QL48 77 aa8.61□□□□□ -1.03
ATG4B-225ENST00000494465 PSPHP1O15172 72 aa8.6□□□□□ -1.03
ATG4B-225ENST00000494465 LINC01558Q9Y6Z2 57 aa8.57□□□□□ -1.04
ATG4B-225ENST00000494465 COX6B2Q6YFQ2 88 aa8.55□□□□□ -1.04
ATG4B-225ENST00000494465 Q5VV11 94 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms