RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 ETDBQ3ZM63 59 aa5.36□□□□□ -1.55
NUDCD3-210ENST00000493613 Q6Q795 121 aa5.36□□□□□ -1.55
NUDCD3-210ENST00000493613 ATP11AUNQ6ZP68 121 aa5.36□□□□□ -1.55
NUDCD3-210ENST00000493613 A0A1B0GV72 72 aa5.35□□□□□ -1.55
NUDCD3-210ENST00000493613 PDE6GP18545 87 aa5.35□□□□□ -1.55
NUDCD3-210ENST00000493613 SMCPP49901 116 aaPredicted RBP5.35□□□□□ -1.55
NUDCD3-210ENST00000493613 Q75L30 129 aa5.34□□□□□ -1.55
NUDCD3-210ENST00000493613 Q96NJ1 140 aa5.32□□□□□ -1.56
NUDCD3-210ENST00000493613 C14orf132Q9NPU4 83 aa5.32□□□□□ -1.56
NUDCD3-210ENST00000493613 VPS25Q9BRG1 176 aa5.31□□□□□ -1.56
NUDCD3-210ENST00000493613 K7ERU9 68 aa5.3□□□□□ -1.56
NUDCD3-210ENST00000493613 LOC110117498A0A087WWA1 95 aa5.29□□□□□ -1.56
NUDCD3-210ENST00000493613 SS18L2Q9UHA2 77 aa5.29□□□□□ -1.56
NUDCD3-210ENST00000493613 CCKP06307 115 aa5.27□□□□□ -1.57
NUDCD3-210ENST00000493613 ACYP1P07311 99 aa5.27□□□□□ -1.57
NUDCD3-210ENST00000493613 A0A087WSZ3 146 aa5.26□□□□□ -1.57
NUDCD3-210ENST00000493613 TRBV7-4A0A0J9YYF1 115 aa5.26□□□□□ -1.57
NUDCD3-210ENST00000493613 C20orf166-AS1Q96NR2 134 aa5.26□□□□□ -1.57
NUDCD3-210ENST00000493613 A0A1B0GW54 56 aa5.25□□□□□ -1.57
NUDCD3-210ENST00000493613 Q6ZQT0 140 aa5.25□□□□□ -1.57
NUDCD3-210ENST00000493613 A8MUU9 505 aa5.24□□□□□ -1.57
NUDCD3-210ENST00000493613 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
NUDCD3-210ENST00000493613 FAM240AA0A1B0GVK7 77 aa5.23□□□□□ -1.57
NUDCD3-210ENST00000493613 DSCR10P59022 87 aa5.23□□□□□ -1.57
NUDCD3-210ENST00000493613 UBL5Q9BZL1 73 aa5.22□□□□□ -1.57
NUDCD3-210ENST00000493613 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.21□□□□□ -1.58
NUDCD3-210ENST00000493613 SIGMAR1Q99720 223 aa5.21□□□□□ -1.58
NUDCD3-210ENST00000493613 USH2AO75445 5202 aa5.21□□□□□ -1.58
NUDCD3-210ENST00000493613 A0A1W2PNM2 257 aa5.2□□□□□ -1.58
NUDCD3-210ENST00000493613 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
NUDCD3-210ENST00000493613 NREPQ16612 68 aa5.2□□□□□ -1.58
NUDCD3-210ENST00000493613 LINC00313P59037 77 aa5.18□□□□□ -1.58
NUDCD3-210ENST00000493613 SSPOA2VEC9 5147 aa5.18□□□□□ -1.58
NUDCD3-210ENST00000493613 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
NUDCD3-210ENST00000493613 FAM236DA0A1B0GTK5 79 aa5.17□□□□□ -1.58
NUDCD3-210ENST00000493613 IGKV4-1P06312 121 aa5.17□□□□□ -1.58
NUDCD3-210ENST00000493613 FAM236CP0DP71 79 aa5.17□□□□□ -1.58
NUDCD3-210ENST00000493613 KRTAP4-6Q9BYQ5 205 aa5.17□□□□□ -1.58
NUDCD3-210ENST00000493613 KRTAP16-1A8MUX0 517 aa5.16□□□□□ -1.58
NUDCD3-210ENST00000493613 LINC00846Q9NV44 126 aa5.16□□□□□ -1.58
NUDCD3-210ENST00000493613 MT2AP02795 61 aa5.15□□□□□ -1.59
NUDCD3-210ENST00000493613 DEFB116Q30KQ4 102 aa5.15□□□□□ -1.59
NUDCD3-210ENST00000493613 BPY2O14599 106 aa5.14□□□□□ -1.59
NUDCD3-210ENST00000493613 ATP5EP2Q5VTU8 51 aa5.14□□□□□ -1.59
NUDCD3-210ENST00000493613 Q6ZVQ6 151 aa5.14□□□□□ -1.59
NUDCD3-210ENST00000493613 NOTCH2NLQ7Z3S9 236 aa5.14□□□□□ -1.59
NUDCD3-210ENST00000493613 LINC00643Q86TS7 51 aa5.14□□□□□ -1.59
NUDCD3-210ENST00000493613 J3KT08 172 aa5.13□□□□□ -1.59
NUDCD3-210ENST00000493613 LCE2BO14633 110 aa5.13□□□□□ -1.59
NUDCD3-210ENST00000493613 PCP4P48539 62 aa5.13□□□□□ -1.59
NUDCD3-210ENST00000493613 RBM12B-AS1Q9P1G2 102 aa5.13□□□□□ -1.59
NUDCD3-210ENST00000493613 IGHV6-1A0A0B4J1U7 121 aa5.12□□□□□ -1.59
NUDCD3-210ENST00000493613 NDUFB1O75438 58 aa5.11□□□□□ -1.59
NUDCD3-210ENST00000493613 MT1FP04733 61 aa5.11□□□□□ -1.59
NUDCD3-210ENST00000493613 HRES1P13985 223 aa5.11□□□□□ -1.59
NUDCD3-210ENST00000493613 MPLKIPQ8TAP9 179 aa5.11□□□□□ -1.59
NUDCD3-210ENST00000493613 LINC00472Q9H8W2 130 aa5.11□□□□□ -1.59
NUDCD3-210ENST00000493613 FCGBPQ9Y6R7 5405 aaPredicted RBP5.1□□□□□ -1.59
NUDCD3-210ENST00000493613 CXCL6P80162 114 aa5.1□□□□□ -1.59
NUDCD3-210ENST00000493613 KRTAP10-10P60014 251 aa5.09□□□□□ -1.59
NUDCD3-210ENST00000493613 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
NUDCD3-210ENST00000493613 IGKV3D-7A0A0C4DH55 119 aa5.08□□□□□ -1.6
NUDCD3-210ENST00000493613 HIST1H4AP62805 103 aaKnown RBP5.07□□□□□ -1.6
NUDCD3-210ENST00000493613 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
NUDCD3-210ENST00000493613 A0A1B0GVX0 72 aa5.05□□□□□ -1.6
NUDCD3-210ENST00000493613 A8MWP4 228 aa5.05□□□□□ -1.6
NUDCD3-210ENST00000493613 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
NUDCD3-210ENST00000493613 C8orf87E5RJ46 101 aa5.04□□□□□ -1.6
NUDCD3-210ENST00000493613 IMUPQ9GZP8 106 aa5.04□□□□□ -1.6
NUDCD3-210ENST00000493613 MT-ATP8P03928 68 aa5.02□□□□□ -1.61
NUDCD3-210ENST00000493613 SPINK7P58062 85 aa5.02□□□□□ -1.61
NUDCD3-210ENST00000493613 ZCCHC13Q8WW36 166 aaKnown RBP5.02□□□□□ -1.61
NUDCD3-210ENST00000493613 SYNE2Q8WXH0 6885 aaKnown RBP5.01□□□□□ -1.61
NUDCD3-210ENST00000493613 PRR15Q8IV56 129 aa5.01□□□□□ -1.61
NUDCD3-210ENST00000493613 K7EQZ3 153 aa5□□□□□ -1.61
NUDCD3-210ENST00000493613 Q8N9L7 120 aa5□□□□□ -1.61
NUDCD3-210ENST00000493613 SCGB1A1P11684 91 aa4.99□□□□□ -1.61
NUDCD3-210ENST00000493613 HCG22E2RYF7 251 aa4.98□□□□□ -1.61
NUDCD3-210ENST00000493613 CASC2Q6XLA1 102 aa4.97□□□□□ -1.61
NUDCD3-210ENST00000493613 Q8N9P0 234 aaPredicted RBP4.96□□□□□ -1.62
NUDCD3-210ENST00000493613 C8orf17Q9NRJ1 99 aa4.96□□□□□ -1.62
NUDCD3-210ENST00000493613 A0A087WVE0 104 aa4.95□□□□□ -1.62
NUDCD3-210ENST00000493613 hDV103S1A0JD37 113 aa4.95□□□□□ -1.62
NUDCD3-210ENST00000493613 WFDC13Q8IUB5 93 aa4.95□□□□□ -1.62
NUDCD3-210ENST00000493613 KRTAP19-6Q3LI70 58 aa4.94□□□□□ -1.62
NUDCD3-210ENST00000493613 FAM236AA0A1B0GUQ0 79 aa4.93□□□□□ -1.62
NUDCD3-210ENST00000493613 FAM236BA0A1B0GV22 79 aa4.93□□□□□ -1.62
NUDCD3-210ENST00000493613 NDUFS5O43920 106 aa4.93□□□□□ -1.62
NUDCD3-210ENST00000493613 MMP24-AS1A0A0U1RRL7 71 aa4.92□□□□□ -1.62
NUDCD3-210ENST00000493613 TMEM254Q8TBM7 123 aa4.92□□□□□ -1.62
NUDCD3-210ENST00000493613 ATOX1O00244 68 aa4.91□□□□□ -1.62
NUDCD3-210ENST00000493613 SMIM20Q8N5G0 67 aa4.91□□□□□ -1.62
NUDCD3-210ENST00000493613 MRPL34Q9BQ48 92 aaKnown RBP4.91□□□□□ -1.62
NUDCD3-210ENST00000493613 TP53AIP1Q9HCN2 124 aa4.89□□□□□ -1.63
NUDCD3-210ENST00000493613 UQCRQO14949 82 aa4.85□□□□□ -1.63
NUDCD3-210ENST00000493613 ANAPC13Q9BS18 74 aa4.85□□□□□ -1.63
NUDCD3-210ENST00000493613 MP68P56378 58 aa4.84□□□□□ -1.63
NUDCD3-210ENST00000493613 H1FX-AS1Q4G0G2 97 aa4.84□□□□□ -1.63
NUDCD3-210ENST00000493613 TRAV7A0A075B6U4 112 aa4.83□□□□□ -1.64
NUDCD3-210ENST00000493613 SERP2Q8N6R1 65 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms