RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 LINC00304Q8N9R0 145 aa5.81□□□□□ -1.48
SOX2-OT-215ENST00000493521 CD164Q04900 197 aa5.79□□□□□ -1.48
SOX2-OT-215ENST00000493521 XP32Q5T750 250 aa5.79□□□□□ -1.48
SOX2-OT-215ENST00000493521 ATP5EP2Q5VTU8 51 aa5.79□□□□□ -1.48
SOX2-OT-215ENST00000493521 KRTAP4-1Q9BYQ7 146 aa5.79□□□□□ -1.48
SOX2-OT-215ENST00000493521 KRTAP9-6A0A140TA67 174 aa5.78□□□□□ -1.48
SOX2-OT-215ENST00000493521 H3BS24 57 aa5.78□□□□□ -1.48
SOX2-OT-215ENST00000493521 IGLV7-46A0A075B6I9 117 aa5.77□□□□□ -1.49
SOX2-OT-215ENST00000493521 BPY2O14599 106 aa5.77□□□□□ -1.49
SOX2-OT-215ENST00000493521 CXCL6P80162 114 aa5.77□□□□□ -1.49
SOX2-OT-215ENST00000493521 TPRXLQ17RH7 258 aa5.76□□□□□ -1.49
SOX2-OT-215ENST00000493521 DEFB116Q30KQ4 102 aa5.76□□□□□ -1.49
SOX2-OT-215ENST00000493521 SS18L2Q9UHA2 77 aa5.76□□□□□ -1.49
SOX2-OT-215ENST00000493521 IMUPQ9GZP8 106 aa5.75□□□□□ -1.49
SOX2-OT-215ENST00000493521 LINC00472Q9H8W2 130 aa5.75□□□□□ -1.49
SOX2-OT-215ENST00000493521 HIST1H4AP62805 103 aaKnown RBP5.74□□□□□ -1.49
SOX2-OT-215ENST00000493521 DSCR10P59022 87 aa5.73□□□□□ -1.49
SOX2-OT-215ENST00000493521 Q8N9L7 120 aa5.73□□□□□ -1.49
SOX2-OT-215ENST00000493521 Q96NJ1 140 aa5.73□□□□□ -1.49
SOX2-OT-215ENST00000493521 A0A087WVE0 104 aa5.72□□□□□ -1.49
SOX2-OT-215ENST00000493521 A0A0U1RQV1 116 aa5.7□□□□□ -1.5
SOX2-OT-215ENST00000493521 SPINK1P00995 79 aa5.7□□□□□ -1.5
SOX2-OT-215ENST00000493521 IGKV4-1P06312 121 aa5.7□□□□□ -1.5
SOX2-OT-215ENST00000493521 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
SOX2-OT-215ENST00000493521 Q5XG85 94 aa5.7□□□□□ -1.5
SOX2-OT-215ENST00000493521 SPAG11AQ6PDA7 123 aa5.7□□□□□ -1.5
SOX2-OT-215ENST00000493521 LIMD2Q9BT23 127 aa5.7□□□□□ -1.5
SOX2-OT-215ENST00000493521 J3KT08 172 aa5.69□□□□□ -1.5
SOX2-OT-215ENST00000493521 K7EQZ3 153 aa5.69□□□□□ -1.5
SOX2-OT-215ENST00000493521 SCGB1A1P11684 91 aa5.69□□□□□ -1.5
SOX2-OT-215ENST00000493521 ASB16-AS1Q495Z4 193 aa5.69□□□□□ -1.5
SOX2-OT-215ENST00000493521 FAM236AA0A1B0GUQ0 79 aa5.68□□□□□ -1.5
SOX2-OT-215ENST00000493521 FAM236BA0A1B0GV22 79 aa5.68□□□□□ -1.5
SOX2-OT-215ENST00000493521 A8MWP4 228 aa5.68□□□□□ -1.5
SOX2-OT-215ENST00000493521 RPS29P62273 56 aaKnown RBP5.67□□□□□ -1.5
SOX2-OT-215ENST00000493521 C1orf195Q5TG92 126 aa5.66□□□□□ -1.5
SOX2-OT-215ENST00000493521 NDUFB1O75438 58 aa5.65□□□□□ -1.5
SOX2-OT-215ENST00000493521 PRR15Q8IV56 129 aa5.65□□□□□ -1.5
SOX2-OT-215ENST00000493521 IGHV6-1A0A0B4J1U7 121 aa5.62□□□□□ -1.51
SOX2-OT-215ENST00000493521 A0A1B0GVX0 72 aa5.62□□□□□ -1.51
SOX2-OT-215ENST00000493521 HCG22E2RYF7 251 aa5.62□□□□□ -1.51
SOX2-OT-215ENST00000493521 FP248Q71RG6 208 aaPredicted RBP5.62□□□□□ -1.51
SOX2-OT-215ENST00000493521 KRTAP19-2Q3LHN2 52 aa5.61□□□□□ -1.51
SOX2-OT-215ENST00000493521 WFDC13Q8IUB5 93 aa5.6□□□□□ -1.51
SOX2-OT-215ENST00000493521 MMP24-AS1A0A0U1RRL7 71 aa5.59□□□□□ -1.51
SOX2-OT-215ENST00000493521 ATOX1O00244 68 aa5.59□□□□□ -1.51
SOX2-OT-215ENST00000493521 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
SOX2-OT-215ENST00000493521 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
SOX2-OT-215ENST00000493521 CASC2Q6XLA1 102 aa5.58□□□□□ -1.52
SOX2-OT-215ENST00000493521 NOTCH2NLQ7Z3S9 236 aa5.58□□□□□ -1.52
SOX2-OT-215ENST00000493521 ANAPC13Q9BS18 74 aa5.58□□□□□ -1.52
SOX2-OT-215ENST00000493521 hDV103S1A0JD37 113 aa5.56□□□□□ -1.52
SOX2-OT-215ENST00000493521 C8orf87E5RJ46 101 aa5.56□□□□□ -1.52
SOX2-OT-215ENST00000493521 PCP4P48539 62 aa5.56□□□□□ -1.52
SOX2-OT-215ENST00000493521 LINC00313P59037 77 aa5.55□□□□□ -1.52
SOX2-OT-215ENST00000493521 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
SOX2-OT-215ENST00000493521 C9orf92A6NGG3 77 aa5.53□□□□□ -1.52
SOX2-OT-215ENST00000493521 TMEM254Q8TBM7 123 aa5.53□□□□□ -1.52
SOX2-OT-215ENST00000493521 SEC61BP60468 96 aaKnown RBP5.52□□□□□ -1.53
SOX2-OT-215ENST00000493521 MT1HP80294 61 aa5.52□□□□□ -1.53
SOX2-OT-215ENST00000493521 SMIM20Q8N5G0 67 aa5.52□□□□□ -1.53
SOX2-OT-215ENST00000493521 SERP2Q8N6R1 65 aa5.52□□□□□ -1.53
SOX2-OT-215ENST00000493521 MRPL34Q9BQ48 92 aaKnown RBP5.52□□□□□ -1.53
SOX2-OT-215ENST00000493521 OCR1Q9BZK8 76 aa5.52□□□□□ -1.53
SOX2-OT-215ENST00000493521 TRAV7A0A075B6U4 112 aa5.51□□□□□ -1.53
SOX2-OT-215ENST00000493521 PCOTHQ58A44 107 aa5.51□□□□□ -1.53
SOX2-OT-215ENST00000493521 FLGP20930 4061 aaPredicted RBP5.5□□□□□ -1.53
SOX2-OT-215ENST00000493521 KRTAP9-9Q9BYP9 154 aa5.5□□□□□ -1.53
SOX2-OT-215ENST00000493521 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
SOX2-OT-215ENST00000493521 FSIP2Q5CZC0 6907 aa5.49□□□□□ -1.53
SOX2-OT-215ENST00000493521 KRTAP16-1A8MUX0 517 aa5.49□□□□□ -1.53
SOX2-OT-215ENST00000493521 NDUFS5O43920 106 aa5.49□□□□□ -1.53
SOX2-OT-215ENST00000493521 COX7CP15954 63 aa5.49□□□□□ -1.53
SOX2-OT-215ENST00000493521 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
SOX2-OT-215ENST00000493521 CCDC179H3BU77 68 aa5.47□□□□□ -1.53
SOX2-OT-215ENST00000493521 UQCRQO14949 82 aa5.47□□□□□ -1.53
SOX2-OT-215ENST00000493521 Q8N9P0 234 aaPredicted RBP5.45□□□□□ -1.54
SOX2-OT-215ENST00000493521 TP53AIP1Q9HCN2 124 aa5.45□□□□□ -1.54
SOX2-OT-215ENST00000493521 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
SOX2-OT-215ENST00000493521 C5orf47Q569G3 176 aa5.42□□□□□ -1.54
SOX2-OT-215ENST00000493521 C20orf197Q8N268 126 aa5.42□□□□□ -1.54
SOX2-OT-215ENST00000493521 KRTAP4-12Q9BQ66 201 aa5.42□□□□□ -1.54
SOX2-OT-215ENST00000493521 H0Y9P7 68 aa5.41□□□□□ -1.54
SOX2-OT-215ENST00000493521 MP68P56378 58 aa5.4□□□□□ -1.54
SOX2-OT-215ENST00000493521 Q5W150 140 aa5.4□□□□□ -1.54
SOX2-OT-215ENST00000493521 SNURFQ9Y675 71 aa5.4□□□□□ -1.54
SOX2-OT-215ENST00000493521 TRAV22A0A0B4J277 110 aa5.39□□□□□ -1.55
SOX2-OT-215ENST00000493521 A8MUU9 505 aa5.39□□□□□ -1.55
SOX2-OT-215ENST00000493521 C20orf166-AS1Q96NR2 134 aa5.39□□□□□ -1.55
SOX2-OT-215ENST00000493521 CYSTM1Q9H1C7 97 aa5.38□□□□□ -1.55
SOX2-OT-215ENST00000493521 KLKP1Q107X0 134 aa5.37□□□□□ -1.55
SOX2-OT-215ENST00000493521 LINC00208Q96KT6 92 aa5.37□□□□□ -1.55
SOX2-OT-215ENST00000493521 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
SOX2-OT-215ENST00000493521 H3BPC8 53 aa5.35□□□□□ -1.55
SOX2-OT-215ENST00000493521 RPL37P61927 97 aaKnown RBP5.35□□□□□ -1.55
SOX2-OT-215ENST00000493521 Q75L30 129 aa5.35□□□□□ -1.55
SOX2-OT-215ENST00000493521 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
SOX2-OT-215ENST00000493521 ZCCHC13Q8WW36 166 aaKnown RBP5.35□□□□□ -1.55
SOX2-OT-215ENST00000493521 LOC101927531A0A1B0GV80 90 aa5.31□□□□□ -1.56
SOX2-OT-215ENST00000493521 H7BZZ5 65 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms