RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 FP248Q71RG6 208 aaPredicted RBP12.34□□□□□ -0.43
PSPC1-204ENST00000492741 K7EQZ3 153 aa12.33□□□□□ -0.44
PSPC1-204ENST00000492741 IGHV6-1A0A0B4J1U7 121 aa12.32□□□□□ -0.44
PSPC1-204ENST00000492741 A0A1B0GVX0 72 aa12.31□□□□□ -0.44
PSPC1-204ENST00000492741 HIST1H4AP62805 103 aaKnown RBP12.31□□□□□ -0.44
PSPC1-204ENST00000492741 PRR15Q8IV56 129 aa12.31□□□□□ -0.44
PSPC1-204ENST00000492741 IGLV7-46A0A075B6I9 117 aa12.3□□□□□ -0.44
PSPC1-204ENST00000492741 MT-ATP8P03928 68 aa12.3□□□□□ -0.44
PSPC1-204ENST00000492741 LINC00313P59037 77 aa12.23□□□□□ -0.45
PSPC1-204ENST00000492741 C9orf92A6NGG3 77 aa12.22□□□□□ -0.45
PSPC1-204ENST00000492741 C8orf87E5RJ46 101 aa12.2□□□□□ -0.46
PSPC1-204ENST00000492741 C8orf17Q9NRJ1 99 aa12.2□□□□□ -0.46
PSPC1-204ENST00000492741 NOTCH2NLQ7Z3S9 236 aa12.2□□□□□ -0.46
PSPC1-204ENST00000492741 A0A087WVE0 104 aa12.18□□□□□ -0.46
PSPC1-204ENST00000492741 IMUPQ9GZP8 106 aa12.18□□□□□ -0.46
PSPC1-204ENST00000492741 MMP24-AS1A0A0U1RRL7 71 aa12.15□□□□□ -0.46
PSPC1-204ENST00000492741 HCG22E2RYF7 251 aa12.15□□□□□ -0.46
PSPC1-204ENST00000492741 WFDC13Q8IUB5 93 aa12.15□□□□□ -0.46
PSPC1-204ENST00000492741 hDV103S1A0JD37 113 aa12.13□□□□□ -0.47
PSPC1-204ENST00000492741 CASC2Q6XLA1 102 aa12.13□□□□□ -0.47
PSPC1-204ENST00000492741 KRTAP13-3Q3SY46 172 aa12.12□□□□□ -0.47
PSPC1-204ENST00000492741 TPRXLQ17RH7 258 aa12.1□□□□□ -0.47
PSPC1-204ENST00000492741 TMEM254Q8TBM7 123 aa12.06□□□□□ -0.48
PSPC1-204ENST00000492741 MRPL34Q9BQ48 92 aaKnown RBP12.05□□□□□ -0.48
PSPC1-204ENST00000492741 KRTAP16-1A8MUX0 517 aa12.03□□□□□ -0.48
PSPC1-204ENST00000492741 HERC1Q15751 4861 aa12.03□□□□□ -0.48
PSPC1-204ENST00000492741 NDUFS5O43920 106 aa12.01□□□□□ -0.49
PSPC1-204ENST00000492741 FAM236AA0A1B0GUQ0 79 aa12□□□□□ -0.49
PSPC1-204ENST00000492741 FAM236BA0A1B0GV22 79 aa12□□□□□ -0.49
PSPC1-204ENST00000492741 SCGB1A1P11684 91 aa12□□□□□ -0.49
PSPC1-204ENST00000492741 XP32Q5T750 250 aa11.99□□□□□ -0.49
PSPC1-204ENST00000492741 Q8N9P0 234 aaPredicted RBP11.95□□□□□ -0.5
PSPC1-204ENST00000492741 C20orf166-AS1Q96NR2 134 aa11.94□□□□□ -0.5
PSPC1-204ENST00000492741 A8MUU9 505 aa11.91□□□□□ -0.5
PSPC1-204ENST00000492741 LPAP08519 4548 aa11.91□□□□□ -0.5
PSPC1-204ENST00000492741 Q75L30 129 aa11.91□□□□□ -0.5
PSPC1-204ENST00000492741 RPL37P61927 97 aaKnown RBP11.87□□□□□ -0.51
PSPC1-204ENST00000492741 TP53AIP1Q9HCN2 124 aa11.86□□□□□ -0.51
PSPC1-204ENST00000492741 ATP11AUNQ6ZP68 121 aa11.83□□□□□ -0.52
PSPC1-204ENST00000492741 ATOX1O00244 68 aa11.83□□□□□ -0.52
PSPC1-204ENST00000492741 OCR1Q9BZK8 76 aa11.8□□□□□ -0.52
PSPC1-204ENST00000492741 HMCN2Q8NDA2 5059 aa11.79□□□□□ -0.52
PSPC1-204ENST00000492741 SMIM20Q8N5G0 67 aa11.78□□□□□ -0.52
PSPC1-204ENST00000492741 UQCRQO14949 82 aa11.77□□□□□ -0.52
PSPC1-204ENST00000492741 ZCCHC13Q8WW36 166 aaKnown RBP11.77□□□□□ -0.52
PSPC1-204ENST00000492741 LRP2P98164 4655 aa11.74□□□□□ -0.53
PSPC1-204ENST00000492741 SEC61BP60468 96 aaKnown RBP11.74□□□□□ -0.53
PSPC1-204ENST00000492741 Q5W150 140 aa11.74□□□□□ -0.53
PSPC1-204ENST00000492741 PCOTHQ58A44 107 aa11.73□□□□□ -0.53
PSPC1-204ENST00000492741 TRAV7A0A075B6U4 112 aa11.72□□□□□ -0.53
PSPC1-204ENST00000492741 TRAV22A0A0B4J277 110 aa11.71□□□□□ -0.54
PSPC1-204ENST00000492741 H0Y9P7 68 aa11.67□□□□□ -0.54
PSPC1-204ENST00000492741 C5orf47Q569G3 176 aa11.66□□□□□ -0.54
PSPC1-204ENST00000492741 SERP2Q8N6R1 65 aa11.66□□□□□ -0.54
PSPC1-204ENST00000492741 ANAPC13Q9BS18 74 aa11.66□□□□□ -0.54
PSPC1-204ENST00000492741 MP68P56378 58 aa11.65□□□□□ -0.54
PSPC1-204ENST00000492741 IGKV2D-30A0A075B6S6 120 aa11.58□□□□□ -0.56
PSPC1-204ENST00000492741 IGKV2-30P06310 120 aa11.58□□□□□ -0.56
PSPC1-204ENST00000492741 LINC00208Q96KT6 92 aa11.58□□□□□ -0.56
PSPC1-204ENST00000492741 COX7CP15954 63 aa11.55□□□□□ -0.56
PSPC1-204ENST00000492741 C1orf64Q8NEQ6 169 aa11.55□□□□□ -0.56
PSPC1-204ENST00000492741 H3BPC8 53 aa11.53□□□□□ -0.56
PSPC1-204ENST00000492741 SPINK7P58062 85 aa11.53□□□□□ -0.56
PSPC1-204ENST00000492741 LOC101927531A0A1B0GV80 90 aa11.52□□□□□ -0.56
PSPC1-204ENST00000492741 C7orf65Q6ZTY9 151 aa11.52□□□□□ -0.56
PSPC1-204ENST00000492741 C20orf197Q8N268 126 aa11.49□□□□□ -0.57
PSPC1-204ENST00000492741 CYP4F30PQ9H0H9 118 aa11.46□□□□□ -0.57
PSPC1-204ENST00000492741 SNURFQ9Y675 71 aa11.46□□□□□ -0.57
PSPC1-204ENST00000492741 MUC17Q685J3 4493 aa11.45□□□□□ -0.58
PSPC1-204ENST00000492741 A0A0U1RQV1 116 aa11.44□□□□□ -0.58
PSPC1-204ENST00000492741 KRTAP4-1Q9BYQ7 146 aa11.43□□□□□ -0.58
PSPC1-204ENST00000492741 CCDC179H3BU77 68 aa11.37□□□□□ -0.59
PSPC1-204ENST00000492741 KLKP1Q107X0 134 aa11.35□□□□□ -0.59
PSPC1-204ENST00000492741 HRES1P13985 223 aa11.31□□□□□ -0.6
PSPC1-204ENST00000492741 UBR4Q5T4S7 5183 aa11.3□□□□□ -0.6
PSPC1-204ENST00000492741 PCP4P48539 62 aa11.29□□□□□ -0.6
PSPC1-204ENST00000492741 C4orf26Q17RF5 130 aa11.28□□□□□ -0.6
PSPC1-204ENST00000492741 RBM12B-AS1Q9P1G2 102 aa11.26□□□□□ -0.61
PSPC1-204ENST00000492741 CYSTM1Q9H1C7 97 aa11.23□□□□□ -0.61
PSPC1-204ENST00000492741 NDUFC1O43677 76 aa11.23□□□□□ -0.61
PSPC1-204ENST00000492741 MUC2Q02817 5179 aa11.22□□□□□ -0.61
PSPC1-204ENST00000492741 FAM236DA0A1B0GTK5 79 aa11.2□□□□□ -0.62
PSPC1-204ENST00000492741 FAM236CP0DP71 79 aa11.2□□□□□ -0.62
PSPC1-204ENST00000492741 MPLKIPQ8TAP9 179 aa11.19□□□□□ -0.62
PSPC1-204ENST00000492741 RNF213Q63HN8 5207 aa11.16□□□□□ -0.62
PSPC1-204ENST00000492741 H7BZZ5 65 aa11.16□□□□□ -0.62
PSPC1-204ENST00000492741 COX6B2Q6YFQ2 88 aa11.16□□□□□ -0.62
PSPC1-204ENST00000492741 SPANXA2-OT1Q8N9U9 137 aa11.09□□□□□ -0.63
PSPC1-204ENST00000492741 KRTAP3-1Q9BYR8 98 aa11.06□□□□□ -0.64
PSPC1-204ENST00000492741 A8MUN3 132 aa11.03□□□□□ -0.64
PSPC1-204ENST00000492741 H1FX-AS1Q4G0G2 97 aa11.01□□□□□ -0.65
PSPC1-204ENST00000492741 DMAC1Q96GE9 116 aa11.01□□□□□ -0.65
PSPC1-204ENST00000492741 KRTAP19-2Q3LHN2 52 aa11.01□□□□□ -0.65
PSPC1-204ENST00000492741 ACYP2P14621 99 aa10.96□□□□□ -0.65
PSPC1-204ENST00000492741 TMEM258P61165 79 aa10.96□□□□□ -0.65
PSPC1-204ENST00000492741 LCE2CQ5TA81 110 aa10.92□□□□□ -0.66
PSPC1-204ENST00000492741 ATP5EP56381 51 aaPredicted RBP10.91□□□□□ -0.66
PSPC1-204ENST00000492741 S4R3F8 94 aa10.87□□□□□ -0.67
PSPC1-204ENST00000492741 CHKB-CPT1BH3BT56 60 aa10.81□□□□□ -0.68
PSPC1-204ENST00000492741 LCA10Q71F78 164 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms