RNA–Protein interactions for RNA: ENST00000487842.1

SCML1-207, Transcript of Scm polycomb group protein like 1, humanhuman

TSL 1 (best)

Gene SCML1, Length 4,615 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-207ENST00000487842 NOTCH1P46531 2555 aa3.01□□□□□ -1.93
SCML1-207ENST00000487842 TEP1Q99973 2627 aaKnown RBP3.01□□□□□ -1.93
SCML1-207ENST00000487842 MAST4O15021 2626 aa3.01□□□□□ -1.93
SCML1-207ENST00000487842 SPEGQ15772 3267 aa3.01□□□□□ -1.93
SCML1-207ENST00000487842 APCP25054 2843 aa3□□□□□ -1.93
SCML1-207ENST00000487842 CFAP46Q8IYW2 2715 aa3□□□□□ -1.93
SCML1-207ENST00000487842 STAB2Q8WWQ8 2551 aa2.99□□□□□ -1.93
SCML1-207ENST00000487842 UTP20O75691 2785 aaKnown RBP2.99□□□□□ -1.93
SCML1-207ENST00000487842 DMXL1Q9Y485 3027 aa2.99□□□□□ -1.93
SCML1-207ENST00000487842 DMXL2Q8TDJ6 3036 aa2.98□□□□□ -1.93
SCML1-207ENST00000487842 KRTAP1-4P0C5Y4 121 aa2.98□□□□□ -1.93
SCML1-207ENST00000487842 HECTD1Q9ULT8 2610 aa2.98□□□□□ -1.93
SCML1-207ENST00000487842 STAB1Q9NY15 2570 aa2.97□□□□□ -1.93
SCML1-207ENST00000487842 COL6A5A8TX70 2615 aa2.97□□□□□ -1.93
SCML1-207ENST00000487842 NSD1Q96L73 2696 aaPredicted RBP2.97□□□□□ -1.93
SCML1-207ENST00000487842 KRTAP17-1Q9BYP8 105 aa2.97□□□□□ -1.93
SCML1-207ENST00000487842 DCHS1Q96JQ0 3298 aa2.96□□□□□ -1.94
SCML1-207ENST00000487842 HRNRQ86YZ3 2850 aaPredicted RBP2.96□□□□□ -1.94
SCML1-207ENST00000487842 TNP1P09430 55 aa2.96□□□□□ -1.94
SCML1-207ENST00000487842 USP34Q70CQ2 3546 aa2.95□□□□□ -1.94
SCML1-207ENST00000487842 NIPBLQ6KC79 2804 aaeCLIP2.95□□□□□ -1.94
SCML1-207ENST00000487842 FLNBO75369 2602 aaKnown RBP2.94□□□□□ -1.94
SCML1-207ENST00000487842 UBR5O95071 2799 aaPredicted RBP2.93□□□□□ -1.94
SCML1-207ENST00000487842 J3QL48 77 aa2.92□□□□□ -1.94
SCML1-207ENST00000487842 IGSF10Q6WRI0 2623 aa2.92□□□□□ -1.94
SCML1-207ENST00000487842 ASH1LQ9NR48 2969 aaKnown RBP2.9□□□□□ -1.94
SCML1-207ENST00000487842 WDFY3Q8IZQ1 3526 aa2.89□□□□□ -1.95
SCML1-207ENST00000487842 BOD1L1Q8NFC6 3051 aa2.89□□□□□ -1.95
SCML1-207ENST00000487842 CSMD1Q96PZ7 3565 aa2.89□□□□□ -1.95
SCML1-207ENST00000487842 ITPR2Q14571 2701 aa2.88□□□□□ -1.95
SCML1-207ENST00000487842 ATMQ13315 3056 aa2.88□□□□□ -1.95
SCML1-207ENST00000487842 Q5VSD8 79 aa2.88□□□□□ -1.95
SCML1-207ENST00000487842 FLNCQ14315 2725 aa2.87□□□□□ -1.95
SCML1-207ENST00000487842 COL12A1Q99715 3063 aa2.87□□□□□ -1.95
SCML1-207ENST00000487842 KRTAP12-1P59990 96 aa2.86□□□□□ -1.95
SCML1-207ENST00000487842 KRTAP12-2P59991 146 aa2.86□□□□□ -1.95
SCML1-207ENST00000487842 NF1P21359 2839 aa2.86□□□□□ -1.95
SCML1-207ENST00000487842 KRTAP10-8P60410 259 aa2.86□□□□□ -1.95
SCML1-207ENST00000487842 XP32Q5T750 250 aa2.85□□□□□ -1.95
SCML1-207ENST00000487842 KRTAP3-1Q9BYR8 98 aa2.85□□□□□ -1.95
SCML1-207ENST00000487842 MYO15AQ9UKN7 3530 aa2.85□□□□□ -1.95
SCML1-207ENST00000487842 ZANQ9Y493 2812 aa2.84□□□□□ -1.95
SCML1-207ENST00000487842 ZFHX4Q86UP3 3567 aa2.84□□□□□ -1.96
SCML1-207ENST00000487842 KRTAP13-4Q3LI77 160 aa2.84□□□□□ -1.96
SCML1-207ENST00000487842 TGP01266 2768 aa2.83□□□□□ -1.96
SCML1-207ENST00000487842 KRTAP10-6P60371 365 aaPredicted RBP2.83□□□□□ -1.96
SCML1-207ENST00000487842 DCHS2Q6V1P9 2916 aa2.83□□□□□ -1.96
SCML1-207ENST00000487842 ALMS1Q8TCU4 4167 aa2.83□□□□□ -1.96
SCML1-207ENST00000487842 DMDP11532 3685 aa2.82□□□□□ -1.96
SCML1-207ENST00000487842 LOC400499M0QZD8 3231 aa2.82□□□□□ -1.96
SCML1-207ENST00000487842 SPTBN5Q9NRC6 3674 aaKnown RBP2.82□□□□□ -1.96
SCML1-207ENST00000487842 SMG1Q96Q15 3661 aaKnown RBP2.81□□□□□ -1.96
SCML1-207ENST00000487842 HIVEP1P15822 2718 aa2.81□□□□□ -1.96
SCML1-207ENST00000487842 PRO2289Q9P1D8 64 aa2.8□□□□□ -1.96
SCML1-207ENST00000487842 INE1O15225 51 aa2.8□□□□□ -1.96
SCML1-207ENST00000487842 CELSR2Q9HCU4 2923 aa2.79□□□□□ -1.96
SCML1-207ENST00000487842 MXRA5Q9NR99 2828 aa2.79□□□□□ -1.96
SCML1-207ENST00000487842 FBN2P35556 2912 aa2.78□□□□□ -1.96
SCML1-207ENST00000487842 SPENQ96T58 3664 aaKnown RBP2.78□□□□□ -1.96
SCML1-207ENST00000487842 M0R2T5 61 aa2.78□□□□□ -1.97
SCML1-207ENST00000487842 TENM2Q9NT68 2774 aa2.77□□□□□ -1.97
SCML1-207ENST00000487842 LCE2DQ5TA82 110 aaPredicted RBP2.76□□□□□ -1.97
SCML1-207ENST00000487842 TENM3Q9P273 2699 aa2.74□□□□□ -1.97
SCML1-207ENST00000487842 KRTAP3-2Q9BYR7 98 aa2.74□□□□□ -1.97
SCML1-207ENST00000487842 EYSQ5T1H1 3165 aa2.73□□□□□ -1.97
SCML1-207ENST00000487842 CRYBG3Q68DQ2 2970 aa2.72□□□□□ -1.97
SCML1-207ENST00000487842 CELSR1Q9NYQ6 3014 aa2.72□□□□□ -1.97
SCML1-207ENST00000487842 KRTAP3-3Q9BYR6 98 aa2.72□□□□□ -1.97
SCML1-207ENST00000487842 KRTAP23-1A1A580 65 aa2.71□□□□□ -1.98
SCML1-207ENST00000487842 SRRM2Q9UQ35 2752 aaKnown RBP2.71□□□□□ -1.98
SCML1-207ENST00000487842 NBPF19A0A087WUL8 3843 aa2.69□□□□□ -1.98
SCML1-207ENST00000487842 ASPMQ8IZT6 3477 aa2.68□□□□□ -1.98
SCML1-207ENST00000487842 SVEP1Q4LDE5 3571 aa2.67□□□□□ -1.98
SCML1-207ENST00000487842 PDZD2O15018 2839 aa2.64□□□□□ -1.99
SCML1-207ENST00000487842 LAMA5O15230 3695 aa2.63□□□□□ -1.99
SCML1-207ENST00000487842 OTOGQ6ZRI0 2925 aa2.62□□□□□ -1.99
SCML1-207ENST00000487842 RELNP78509 3460 aa2.61□□□□□ -1.99
SCML1-207ENST00000487842 VWFP04275 2813 aa2.61□□□□□ -1.99
SCML1-207ENST00000487842 KRTAP21-3Q3LHN1 58 aa2.59□□□□□ -1.99
SCML1-207ENST00000487842 A0A1B0GVY2 172 aa2.59□□□□□ -1.99
SCML1-207ENST00000487842 PKD1L1Q8TDX9 2849 aa2.57□□□□□ -2
SCML1-207ENST00000487842 BSNQ9UPA5 3926 aa2.57□□□□□ -2
SCML1-207ENST00000487842 TENM1Q9UKZ4 2725 aa2.56□□□□□ -2
SCML1-207ENST00000487842 TENM4Q6N022 2769 aa2.55□□□□□ -2
SCML1-207ENST00000487842 CUBNO60494 3623 aa2.54□□□□□ -2
SCML1-207ENST00000487842 MUC3AQ02505 3323 aa2.53□□□□□ -2
SCML1-207ENST00000487842 COL7A1Q02388 2944 aa2.53□□□□□ -2
SCML1-207ENST00000487842 AKAP9Q99996 3911 aa2.53□□□□□ -2.01
SCML1-207ENST00000487842 LOC100996750A0A140TA64 210 aa2.53□□□□□ -2.01
SCML1-207ENST00000487842 KRTAP4-6Q9BYQ5 205 aa2.53□□□□□ -2.01
SCML1-207ENST00000487842 MEGF8Q7Z7M0 2845 aa2.51□□□□□ -2.01
SCML1-207ENST00000487842 FBN3Q75N90 2809 aa2.51□□□□□ -2.01
SCML1-207ENST00000487842 FBN1P35555 2871 aaKnown RBP2.5□□□□□ -2.01
SCML1-207ENST00000487842 VPS13CQ709C8 3753 aa2.5□□□□□ -2.01
SCML1-207ENST00000487842 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
SCML1-207ENST00000487842 CSMD2Q7Z408 3487 aa2.48□□□□□ -2.01
SCML1-207ENST00000487842 ANK3Q12955 4377 aaKnown RBP2.48□□□□□ -2.01
SCML1-207ENST00000487842 KRTAP10-4P60372 401 aaPredicted RBP2.47□□□□□ -2.01
SCML1-207ENST00000487842 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
SCML1-207ENST00000487842 MT1HL1P0DM35 61 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms