RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 PRB2P02812 416 aaPredicted RBP2.82□□□□□ -1.96
SMARCC1-206ENST00000485737 CHTF8P0CG12 524 aa2.82□□□□□ -1.96
SMARCC1-206ENST00000485737 DYNC2H1Q8NCM8 4307 aaKnown RBP2.82□□□□□ -1.96
SMARCC1-206ENST00000485737 HUWE1Q7Z6Z7 4374 aaKnown RBP2.82□□□□□ -1.96
SMARCC1-206ENST00000485737 HRES1P13985 223 aa2.81□□□□□ -1.96
SMARCC1-206ENST00000485737 C7orf65Q6ZTY9 151 aa2.81□□□□□ -1.96
SMARCC1-206ENST00000485737 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
SMARCC1-206ENST00000485737 ANK2Q01484 3957 aa2.81□□□□□ -1.96
SMARCC1-206ENST00000485737 KRTAP13-3Q3SY46 172 aa2.8□□□□□ -1.96
SMARCC1-206ENST00000485737 PCOTHQ58A44 107 aa2.8□□□□□ -1.96
SMARCC1-206ENST00000485737 SPTSSBQ8NFR3 76 aa2.8□□□□□ -1.96
SMARCC1-206ENST00000485737 MRPL34Q9BQ48 92 aaKnown RBP2.8□□□□□ -1.96
SMARCC1-206ENST00000485737 RBM12B-AS1Q9P1G2 102 aa2.8□□□□□ -1.96
SMARCC1-206ENST00000485737 ZNF706Q9Y5V0 76 aaPredicted RBP2.8□□□□□ -1.96
SMARCC1-206ENST00000485737 TENM3Q9P273 2699 aa2.8□□□□□ -1.96
SMARCC1-206ENST00000485737 OTOGQ6ZRI0 2925 aa2.79□□□□□ -1.96
SMARCC1-206ENST00000485737 KRTAP24-1Q3LI83 254 aa2.79□□□□□ -1.96
SMARCC1-206ENST00000485737 PRR26Q8N8Z3 221 aa2.79□□□□□ -1.96
SMARCC1-206ENST00000485737 SPACA4Q8TDM5 124 aa2.79□□□□□ -1.96
SMARCC1-206ENST00000485737 ITPR2Q14571 2701 aa2.79□□□□□ -1.96
SMARCC1-206ENST00000485737 CMYA5Q8N3K9 4069 aa2.79□□□□□ -1.96
SMARCC1-206ENST00000485737 DNAH10Q8IVF4 4471 aa2.78□□□□□ -1.96
SMARCC1-206ENST00000485737 SPINK7P58062 85 aa2.78□□□□□ -1.96
SMARCC1-206ENST00000485737 SPAG11AQ6PDA7 123 aa2.78□□□□□ -1.96
SMARCC1-206ENST00000485737 APLNQ9ULZ1 77 aa2.78□□□□□ -1.96
SMARCC1-206ENST00000485737 TEP1Q99973 2627 aaKnown RBP2.78□□□□□ -1.96
SMARCC1-206ENST00000485737 FASNP49327 2511 aaKnown RBP2.78□□□□□ -1.96
SMARCC1-206ENST00000485737 TRRAPQ9Y4A5 3859 aa2.78□□□□□ -1.96
SMARCC1-206ENST00000485737 A0A087X002 238 aa2.77□□□□□ -1.97
SMARCC1-206ENST00000485737 IGHV6-1A0A0B4J1U7 121 aa2.77□□□□□ -1.97
SMARCC1-206ENST00000485737 PANO1I0J062 215 aa2.77□□□□□ -1.97
SMARCC1-206ENST00000485737 K7EIL1 84 aa2.77□□□□□ -1.97
SMARCC1-206ENST00000485737 CDK2AP2O75956 126 aa2.77□□□□□ -1.97
SMARCC1-206ENST00000485737 Q6ZRN7 208 aaPredicted RBP2.77□□□□□ -1.97
SMARCC1-206ENST00000485737 KMT2BQ9UMN6 2715 aaPredicted RBP2.77□□□□□ -1.97
SMARCC1-206ENST00000485737 DNAH9Q9NYC9 4486 aa2.77□□□□□ -1.97
SMARCC1-206ENST00000485737 IGLV9-49A0A0B4J1Y8 123 aa2.76□□□□□ -1.97
SMARCC1-206ENST00000485737 C8orf87E5RJ46 101 aa2.76□□□□□ -1.97
SMARCC1-206ENST00000485737 UBE2DNLQ8IWF7 75 aa2.76□□□□□ -1.97
SMARCC1-206ENST00000485737 DMAC1Q96GE9 116 aa2.76□□□□□ -1.97
SMARCC1-206ENST00000485737 ATRQ13535 2644 aa2.76□□□□□ -1.97
SMARCC1-206ENST00000485737 PKD1L1Q8TDX9 2849 aa2.75□□□□□ -1.97
SMARCC1-206ENST00000485737 IGLV5-52A0A0A0MRZ9 124 aa2.75□□□□□ -1.97
SMARCC1-206ENST00000485737 NBDYA0A0U1RRE5 68 aa2.75□□□□□ -1.97
SMARCC1-206ENST00000485737 DNAH8Q96JB1 4490 aa2.75□□□□□ -1.97
SMARCC1-206ENST00000485737 HELZ2Q9BYK8 2649 aaKnown RBP2.75□□□□□ -1.97
SMARCC1-206ENST00000485737 DNAH17Q9UFH2 4485 aa2.74□□□□□ -1.97
SMARCC1-206ENST00000485737 ZNF861PO60384 105 aa2.74□□□□□ -1.97
SMARCC1-206ENST00000485737 ACYP2P14621 99 aa2.74□□□□□ -1.97
SMARCC1-206ENST00000485737 Q5W150 140 aa2.74□□□□□ -1.97
SMARCC1-206ENST00000485737 NOTCH2NLQ7Z3S9 236 aa2.74□□□□□ -1.97
SMARCC1-206ENST00000485737 MT3P25713 68 aa2.73□□□□□ -1.97
SMARCC1-206ENST00000485737 VPS13DQ5THJ4 4388 aa2.73□□□□□ -1.97
SMARCC1-206ENST00000485737 ALMS1Q8TCU4 4167 aa2.73□□□□□ -1.97
SMARCC1-206ENST00000485737 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
SMARCC1-206ENST00000485737 SPATA8Q6RVD6 105 aa2.72□□□□□ -1.97
SMARCC1-206ENST00000485737 PSORS1C2Q9UIG4 136 aa2.72□□□□□ -1.97
SMARCC1-206ENST00000485737 MAST4O15021 2626 aa2.72□□□□□ -1.97
SMARCC1-206ENST00000485737 BAHCC1Q9P281 2608 aa2.71□□□□□ -1.98
SMARCC1-206ENST00000485737 A0A087WTM6 91 aa2.71□□□□□ -1.98
SMARCC1-206ENST00000485737 NUPR2A6NF83 97 aa2.71□□□□□ -1.98
SMARCC1-206ENST00000485737 LYSTQ99698 3801 aa2.7□□□□□ -1.98
SMARCC1-206ENST00000485737 RTL8CO15255 209 aa2.7□□□□□ -1.98
SMARCC1-206ENST00000485737 LINC00313P59037 77 aa2.7□□□□□ -1.98
SMARCC1-206ENST00000485737 TENM2Q9NT68 2774 aa2.7□□□□□ -1.98
SMARCC1-206ENST00000485737 PLECQ15149 4684 aaKnown RBP2.69□□□□□ -1.98
SMARCC1-206ENST00000485737 A0A1B0GU69 56 aa2.69□□□□□ -1.98
SMARCC1-206ENST00000485737 IGLV7-43P04211 117 aa2.69□□□□□ -1.98
SMARCC1-206ENST00000485737 SSBP3-AS1Q7Z2R9 100 aa2.69□□□□□ -1.98
SMARCC1-206ENST00000485737 FLNBO75369 2602 aaKnown RBP2.69□□□□□ -1.98
SMARCC1-206ENST00000485737 KRTAP16-1A8MUX0 517 aa2.68□□□□□ -1.98
SMARCC1-206ENST00000485737 F8P00451 2351 aa2.68□□□□□ -1.98
SMARCC1-206ENST00000485737 HECTD1Q9ULT8 2610 aa2.68□□□□□ -1.98
SMARCC1-206ENST00000485737 UQCR11O14957 56 aa2.67□□□□□ -1.98
SMARCC1-206ENST00000485737 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
SMARCC1-206ENST00000485737 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
SMARCC1-206ENST00000485737 SPINK6Q6UWN8 80 aa2.67□□□□□ -1.98
SMARCC1-206ENST00000485737 ANAPC11Q9NYG5 84 aa2.67□□□□□ -1.98
SMARCC1-206ENST00000485737 SRRM2Q9UQ35 2752 aaKnown RBP2.66□□□□□ -1.98
SMARCC1-206ENST00000485737 DNAH2Q9P225 4427 aa2.66□□□□□ -1.98
SMARCC1-206ENST00000485737 MIR22HGQ0VDD5 57 aa2.66□□□□□ -1.98
SMARCC1-206ENST00000485737 CIRBP-AS1Q8TBR5 109 aa2.66□□□□□ -1.98
SMARCC1-206ENST00000485737 PRAC1Q96KF2 57 aa2.66□□□□□ -1.98
SMARCC1-206ENST00000485737 LINC01554Q52M75 96 aa2.65□□□□□ -1.99
SMARCC1-206ENST00000485737 FBN1P35555 2871 aaKnown RBP2.65□□□□□ -1.99
SMARCC1-206ENST00000485737 ADM2Q7Z4H4 148 aa2.64□□□□□ -1.99
SMARCC1-206ENST00000485737 STAB2Q8WWQ8 2551 aa2.64□□□□□ -1.99
SMARCC1-206ENST00000485737 PRKDCP78527 4128 aaKnown RBP2.63□□□□□ -1.99
SMARCC1-206ENST00000485737 NBEAL1Q6ZS30 2694 aa2.63□□□□□ -1.99
SMARCC1-206ENST00000485737 KRTAP13-2Q52LG2 175 aa2.63□□□□□ -1.99
SMARCC1-206ENST00000485737 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
SMARCC1-206ENST00000485737 HECTD4Q9Y4D8 3996 aa2.63□□□□□ -1.99
SMARCC1-206ENST00000485737 NOTCH1P46531 2555 aa2.62□□□□□ -1.99
SMARCC1-206ENST00000485737 STAB1Q9NY15 2570 aa2.62□□□□□ -1.99
SMARCC1-206ENST00000485737 DNAH6Q9C0G6 4158 aa2.62□□□□□ -1.99
SMARCC1-206ENST00000485737 RETNLBQ9BQ08 111 aa2.62□□□□□ -1.99
SMARCC1-206ENST00000485737 DNAH11Q96DT5 4516 aa2.61□□□□□ -1.99
SMARCC1-206ENST00000485737 LY6G6CO95867 125 aa2.61□□□□□ -1.99
SMARCC1-206ENST00000485737 DNAH7Q8WXX0 4024 aa2.61□□□□□ -1.99
SMARCC1-206ENST00000485737 KRTAP1-4P0C5Y4 121 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 262.3 ms