RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 SPRR4Q96PI1 79 aa1.18□□□□□ -2.22
SRRM1-213ENST00000485441 WDR87Q6ZQQ6 2873 aa1.18□□□□□ -2.22
SRRM1-213ENST00000485441 CDH23Q9H251 3354 aa1.17□□□□□ -2.22
SRRM1-213ENST00000485441 LOC400499M0QZD8 3231 aa1.17□□□□□ -2.22
SRRM1-213ENST00000485441 A0A087WTM6 91 aa1.17□□□□□ -2.22
SRRM1-213ENST00000485441 DEFB110Q30KQ9 67 aa1.17□□□□□ -2.22
SRRM1-213ENST00000485441 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.17□□□□□ -2.22
SRRM1-213ENST00000485441 CADP27708 2225 aa1.17□□□□□ -2.22
SRRM1-213ENST00000485441 USF3Q68DE3 2245 aa1.17□□□□□ -2.22
SRRM1-213ENST00000485441 KMT2CQ8NEZ4 4911 aaKnown RBP1.17□□□□□ -2.22
SRRM1-213ENST00000485441 ABCA1O95477 2261 aa1.17□□□□□ -2.22
SRRM1-213ENST00000485441 DOPEY2Q9Y3R5 2298 aa1.17□□□□□ -2.22
SRRM1-213ENST00000485441 WNK1Q9H4A3 2382 aa1.16□□□□□ -2.22
SRRM1-213ENST00000485441 VPS13AQ96RL7 3174 aa1.16□□□□□ -2.22
SRRM1-213ENST00000485441 NSD1Q96L73 2696 aaPredicted RBP1.16□□□□□ -2.22
SRRM1-213ENST00000485441 A0A1B0GU69 56 aa1.16□□□□□ -2.22
SRRM1-213ENST00000485441 K7EIM0 57 aa1.16□□□□□ -2.22
SRRM1-213ENST00000485441 APELAP0DMC3 54 aa1.16□□□□□ -2.22
SRRM1-213ENST00000485441 CELSR2Q9HCU4 2923 aa1.16□□□□□ -2.22
SRRM1-213ENST00000485441 RYR2Q92736 4967 aa1.16□□□□□ -2.22
SRRM1-213ENST00000485441 F5P12259 2224 aa1.16□□□□□ -2.22
SRRM1-213ENST00000485441 ZZEF1O43149 2961 aa1.16□□□□□ -2.22
SRRM1-213ENST00000485441 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.16□□□□□ -2.222e-7■■■□□ 19
SRRM1-213ENST00000485441 ITPR1Q14643 2758 aa1.15□□□□□ -2.22
SRRM1-213ENST00000485441 PLCE1Q9P212 2302 aa1.15□□□□□ -2.23
SRRM1-213ENST00000485441 Q8IZM0 81 aa1.15□□□□□ -2.23
SRRM1-213ENST00000485441 LINC00472Q9H8W2 130 aa1.15□□□□□ -2.23
SRRM1-213ENST00000485441 TOMM7Q9P0U1 55 aa1.15□□□□□ -2.23
SRRM1-213ENST00000485441 NBPF19A0A087WUL8 3843 aa1.15□□□□□ -2.23
SRRM1-213ENST00000485441 PTPRQQ9UMZ3 2332 aa1.15□□□□□ -2.23
SRRM1-213ENST00000485441 TGP01266 2768 aa1.14□□□□□ -2.23
SRRM1-213ENST00000485441 DEFB131BA0A096LNP1 70 aa1.14□□□□□ -2.23
SRRM1-213ENST00000485441 TRGV1A0A0A0MS02 117 aa1.14□□□□□ -2.23
SRRM1-213ENST00000485441 K7EQZ3 153 aa1.14□□□□□ -2.23
SRRM1-213ENST00000485441 MRPL33O75394 65 aaKnown RBP1.14□□□□□ -2.23
SRRM1-213ENST00000485441 WFDC13Q8IUB5 93 aa1.14□□□□□ -2.23
SRRM1-213ENST00000485441 PLAC4Q8WY50 150 aa1.14□□□□□ -2.23
SRRM1-213ENST00000485441 ZNF469Q96JG9 3925 aaPredicted RBP1.14□□□□□ -2.23
SRRM1-213ENST00000485441 CELSR1Q9NYQ6 3014 aa1.13□□□□□ -2.23
SRRM1-213ENST00000485441 HERC2O95714 4834 aa1.13□□□□□ -2.23
SRRM1-213ENST00000485441 A8MTW9 85 aa1.13□□□□□ -2.23
SRRM1-213ENST00000485441 CD52P31358 61 aa1.13□□□□□ -2.23
SRRM1-213ENST00000485441 WFDC10BQ8IUB3 73 aa1.13□□□□□ -2.23
SRRM1-213ENST00000485441 NBEAQ8NFP9 2946 aa1.12□□□□□ -2.23
SRRM1-213ENST00000485441 ABCA13Q86UQ4 5058 aa1.12□□□□□ -2.23
SRRM1-213ENST00000485441 FRYLO94915 3013 aa1.12□□□□□ -2.23
SRRM1-213ENST00000485441 SPINK13Q1W4C9 94 aa1.12□□□□□ -2.23
SRRM1-213ENST00000485441 Q96NJ1 140 aa1.12□□□□□ -2.23
SRRM1-213ENST00000485441 CSPG4Q6UVK1 2322 aa1.12□□□□□ -2.23
SRRM1-213ENST00000485441 TENM2Q9NT68 2774 aa1.12□□□□□ -2.23
SRRM1-213ENST00000485441 TENM3Q9P273 2699 aa1.12□□□□□ -2.23
SRRM1-213ENST00000485441 DMXL1Q9Y485 3027 aa1.11□□□□□ -2.23
SRRM1-213ENST00000485441 HERC1Q15751 4861 aa1.11□□□□□ -2.23
SRRM1-213ENST00000485441 IGLV5-48A0A075B6I7 105 aa1.11□□□□□ -2.23
SRRM1-213ENST00000485441 K7EIL1 84 aa1.11□□□□□ -2.23
SRRM1-213ENST00000485441 LY6G6CO95867 125 aa1.11□□□□□ -2.23
SRRM1-213ENST00000485441 ACYP2P14621 99 aa1.11□□□□□ -2.23
SRRM1-213ENST00000485441 DEFB1P60022 68 aa1.11□□□□□ -2.23
SRRM1-213ENST00000485441 COX17Q14061 63 aa1.11□□□□□ -2.23
SRRM1-213ENST00000485441 SSBP3-AS1Q7Z2R9 100 aa1.11□□□□□ -2.23
SRRM1-213ENST00000485441 DEFB108BQ8NET1 73 aa1.11□□□□□ -2.23
SRRM1-213ENST00000485441 URB1O60287 2271 aaKnown RBP1.11□□□□□ -2.23
SRRM1-213ENST00000485441 KNL1Q8NG31 2342 aa1.11□□□□□ -2.23
SRRM1-213ENST00000485441 NBASA2RRP1 2371 aa1.11□□□□□ -2.23
SRRM1-213ENST00000485441 AKAP13Q12802 2813 aa1.11□□□□□ -2.23
SRRM1-213ENST00000485441 CRYBG3Q68DQ2 2970 aa1.1□□□□□ -2.23
SRRM1-213ENST00000485441 MINOS1Q5TGZ0 78 aa1.1□□□□□ -2.23
SRRM1-213ENST00000485441 CRIPTQ9P021 101 aa1.1□□□□□ -2.23
SRRM1-213ENST00000485441 KAAG1Q9UBP8 84 aa1.1□□□□□ -2.23
SRRM1-213ENST00000485441 WDFY3Q8IZQ1 3526 aa1.1□□□□□ -2.23
SRRM1-213ENST00000485441 MXRA5Q9NR99 2828 aa1.09□□□□□ -2.23
SRRM1-213ENST00000485441 SPTY2D1-AS1A0A0U1RR47 76 aa1.09□□□□□ -2.23
SRRM1-213ENST00000485441 RPL37P61927 97 aaKnown RBP1.09□□□□□ -2.23
SRRM1-213ENST00000485441 DEFB105AQ8NG35 78 aa1.09□□□□□ -2.23
SRRM1-213ENST00000485441 TP53AIP1Q9HCN2 124 aa1.09□□□□□ -2.23
SRRM1-213ENST00000485441 C6orf48Q9UBA6 75 aa1.09□□□□□ -2.23
SRRM1-213ENST00000485441 COL12A1Q99715 3063 aa1.09□□□□□ -2.24
SRRM1-213ENST00000485441 SPENQ96T58 3664 aaKnown RBP1.09□□□□□ -2.24
SRRM1-213ENST00000485441 ITPR2Q14571 2701 aa1.09□□□□□ -2.24
SRRM1-213ENST00000485441 DMBT1Q9UGM3 2413 aaPredicted RBP1.08□□□□□ -2.24
SRRM1-213ENST00000485441 PRRC2CQ9Y520 2896 aaKnown RBP1.08□□□□□ -2.24
SRRM1-213ENST00000485441 KLK9Q2XQG4 91 aa1.08□□□□□ -2.24
SRRM1-213ENST00000485441 CACNA1EQ15878 2313 aa1.07□□□□□ -2.24
SRRM1-213ENST00000485441 MYO15AQ9UKN7 3530 aa1.07□□□□□ -2.24
SRRM1-213ENST00000485441 FREM2Q5SZK8 3169 aa1.07□□□□□ -2.24
SRRM1-213ENST00000485441 HIVEP1P15822 2718 aa1.07□□□□□ -2.24
SRRM1-213ENST00000485441 MMP24-AS1A0A0U1RRL7 71 aa1.07□□□□□ -2.24
SRRM1-213ENST00000485441 LYNX1G3V0Z9 82 aa1.07□□□□□ -2.24
SRRM1-213ENST00000485441 Q6ZRX8 168 aa1.07□□□□□ -2.24
SRRM1-213ENST00000485441 RHPN1-AS1Q9BWJ2 59 aa1.07□□□□□ -2.24
SRRM1-213ENST00000485441 Q9Y3F1 56 aa1.07□□□□□ -2.24
SRRM1-213ENST00000485441 AHCTF1Q8WYP5 2266 aa1.06□□□□□ -2.24
SRRM1-213ENST00000485441 ASXL3Q9C0F0 2248 aa1.06□□□□□ -2.24
SRRM1-213ENST00000485441 G3V318 75 aa1.06□□□□□ -2.24
SRRM1-213ENST00000485441 HTN1P15515 57 aa1.06□□□□□ -2.24
SRRM1-213ENST00000485441 MACF1Q9UPN3 7388 aaKnown RBP1.06□□□□□ -2.24
SRRM1-213ENST00000485441 APC2O95996 2303 aa1.06□□□□□ -2.24
SRRM1-213ENST00000485441 SONP18583 2426 aaKnown RBP1.06□□□□□ -2.24
SRRM1-213ENST00000485441 NIPBLQ6KC79 2804 aaeCLIP1.06□□□□□ -2.24
SRRM1-213ENST00000485441 FAT4Q6V0I7 4981 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms