RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 KRTAP10-2P60368 255 aa8.96□□□□□ -0.97
TTC3-219ENST00000485402 SPRR1BP22528 89 aa8.96□□□□□ -0.98
TTC3-219ENST00000485402 C8orf17Q9NRJ1 99 aa8.95□□□□□ -0.98
TTC3-219ENST00000485402 MOBPQ13875 183 aa8.94□□□□□ -0.98
TTC3-219ENST00000485402 ALMS1Q8TCU4 4167 aa8.94□□□□□ -0.98
TTC3-219ENST00000485402 DNAH17Q9UFH2 4485 aa8.94□□□□□ -0.98
TTC3-219ENST00000485402 SPACA4Q8TDM5 124 aa8.93□□□□□ -0.98
TTC3-219ENST00000485402 A0A087X002 238 aa8.93□□□□□ -0.98
TTC3-219ENST00000485402 NOTCH2NLQ7Z3S9 236 aa8.93□□□□□ -0.98
TTC3-219ENST00000485402 LOC101927531A0A1B0GV80 90 aa8.92□□□□□ -0.98
TTC3-219ENST00000485402 HECTD4Q9Y4D8 3996 aa8.92□□□□□ -0.98
TTC3-219ENST00000485402 Q75L30 129 aa8.91□□□□□ -0.98
TTC3-219ENST00000485402 SACSQ9NZJ4 4579 aa8.9□□□□□ -0.98
TTC3-219ENST00000485402 TP53AIP1Q9HCN2 124 aa8.9□□□□□ -0.98
TTC3-219ENST00000485402 PRR26Q8N8Z3 221 aa8.9□□□□□ -0.99
TTC3-219ENST00000485402 Q96NJ1 140 aa8.89□□□□□ -0.99
TTC3-219ENST00000485402 ATP11AUNQ6ZP68 121 aa8.88□□□□□ -0.99
TTC3-219ENST00000485402 HRES1P13985 223 aa8.88□□□□□ -0.99
TTC3-219ENST00000485402 SPINK7P58062 85 aa8.88□□□□□ -0.99
TTC3-219ENST00000485402 A0A1B0GVX0 72 aa8.87□□□□□ -0.99
TTC3-219ENST00000485402 RETNLBQ9BQ08 111 aa8.87□□□□□ -0.99
TTC3-219ENST00000485402 KTN1-AS1Q86SY8 53 aa8.87□□□□□ -0.99
TTC3-219ENST00000485402 DNAH6Q9C0G6 4158 aa8.87□□□□□ -0.99
TTC3-219ENST00000485402 MRPL34Q9BQ48 92 aaKnown RBP8.87□□□□□ -0.99
TTC3-219ENST00000485402 FRAS1Q86XX4 4008 aa8.85□□□□□ -0.99
TTC3-219ENST00000485402 CDC42SE1Q9NRR8 79 aa8.84□□□□□ -1
TTC3-219ENST00000485402 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
TTC3-219ENST00000485402 DNAH11Q96DT5 4516 aa8.83□□□□□ -1
TTC3-219ENST00000485402 KRTAP10-1P60331 282 aa8.82□□□□□ -1
TTC3-219ENST00000485402 CIRBP-AS1Q8TBR5 109 aa8.82□□□□□ -1
TTC3-219ENST00000485402 LINC01558Q9Y6Z2 57 aa8.82□□□□□ -1
TTC3-219ENST00000485402 FAT2Q9NYQ8 4349 aa8.82□□□□□ -1
TTC3-219ENST00000485402 PLAC8Q9NZF1 115 aa8.82□□□□□ -1
TTC3-219ENST00000485402 KRTAP13-1Q8IUC0 172 aa8.81□□□□□ -1
TTC3-219ENST00000485402 KMT2CQ8NEZ4 4911 aaKnown RBP8.81□□□□□ -1
TTC3-219ENST00000485402 DNAH5Q8TE73 4624 aa8.81□□□□□ -1
TTC3-219ENST00000485402 PSORS1C2Q9UIG4 136 aa8.8□□□□□ -1
TTC3-219ENST00000485402 Q5W150 140 aa8.8□□□□□ -1
TTC3-219ENST00000485402 A6NN06 94 aa8.77□□□□□ -1.01
TTC3-219ENST00000485402 ASB16-AS1Q495Z4 193 aa8.75□□□□□ -1.01
TTC3-219ENST00000485402 DNAH8Q96JB1 4490 aa8.75□□□□□ -1.01
TTC3-219ENST00000485402 ZNF706Q9Y5V0 76 aaPredicted RBP8.74□□□□□ -1.01
TTC3-219ENST00000485402 PKD1P98161 4303 aa8.74□□□□□ -1.01
TTC3-219ENST00000485402 PKHD1P08F94 4074 aa8.73□□□□□ -1.01
TTC3-219ENST00000485402 ZNF861PO60384 105 aa8.7□□□□□ -1.02
TTC3-219ENST00000485402 RYR2Q92736 4967 aa8.7□□□□□ -1.02
TTC3-219ENST00000485402 Q6ZSA8 131 aa8.7□□□□□ -1.02
TTC3-219ENST00000485402 C7orf65Q6ZTY9 151 aa8.69□□□□□ -1.02
TTC3-219ENST00000485402 LINC00483Q53H64 154 aa8.69□□□□□ -1.02
TTC3-219ENST00000485402 ACYP2P14621 99 aa8.68□□□□□ -1.02
TTC3-219ENST00000485402 PRAC1Q96KF2 57 aa8.68□□□□□ -1.02
TTC3-219ENST00000485402 LRP1BQ9NZR2 4599 aa8.65□□□□□ -1.02
TTC3-219ENST00000485402 IGLV7-43P04211 117 aa8.65□□□□□ -1.02
TTC3-219ENST00000485402 A0A1B0GVY2 172 aa8.64□□□□□ -1.03
TTC3-219ENST00000485402 SMR3BP02814 79 aaPredicted RBP8.63□□□□□ -1.03
TTC3-219ENST00000485402 A0A1B0GU69 56 aa8.62□□□□□ -1.03
TTC3-219ENST00000485402 ADM2Q7Z4H4 148 aa8.61□□□□□ -1.03
TTC3-219ENST00000485402 LINC00313P59037 77 aa8.6□□□□□ -1.03
TTC3-219ENST00000485402 IGKV2D-30A0A075B6S6 120 aa8.59□□□□□ -1.03
TTC3-219ENST00000485402 IGKV2-30P06310 120 aa8.59□□□□□ -1.03
TTC3-219ENST00000485402 DYNC1H1Q14204 4646 aaKnown RBP8.59□□□□□ -1.03
TTC3-219ENST00000485402 RYR3Q15413 4870 aa8.57□□□□□ -1.04
TTC3-219ENST00000485402 SPINK1P00995 79 aa8.55□□□□□ -1.04
TTC3-219ENST00000485402 VPS13BQ7Z7G8 4022 aa8.53□□□□□ -1.04
TTC3-219ENST00000485402 KRTAP13-3Q3SY46 172 aa8.53□□□□□ -1.04
TTC3-219ENST00000485402 FAM229AH3BQW9 127 aa8.51□□□□□ -1.05
TTC3-219ENST00000485402 DMAC1Q96GE9 116 aa8.51□□□□□ -1.05
TTC3-219ENST00000485402 C8orf87E5RJ46 101 aa8.49□□□□□ -1.05
TTC3-219ENST00000485402 FAT1Q14517 4588 aa8.49□□□□□ -1.05
TTC3-219ENST00000485402 MIR22HGQ0VDD5 57 aa8.48□□□□□ -1.05
TTC3-219ENST00000485402 SSBP3-AS1Q7Z2R9 100 aa8.46□□□□□ -1.05
TTC3-219ENST00000485402 APOBP04114 4563 aaKnown RBP8.45□□□□□ -1.06
TTC3-219ENST00000485402 UQCR11O14957 56 aa8.44□□□□□ -1.06
TTC3-219ENST00000485402 PLA2G1BP04054 148 aaKnown RBP8.42□□□□□ -1.06
TTC3-219ENST00000485402 Q8N1X5 172 aa8.41□□□□□ -1.06
TTC3-219ENST00000485402 KRTAP13-2Q52LG2 175 aa8.39□□□□□ -1.07
TTC3-219ENST00000485402 KRTAP1-4P0C5Y4 121 aa8.38□□□□□ -1.07
TTC3-219ENST00000485402 SPATA8Q6RVD6 105 aa8.38□□□□□ -1.07
TTC3-219ENST00000485402 C4orf48Q5BLP8 95 aa8.36□□□□□ -1.07
TTC3-219ENST00000485402 LINC01554Q52M75 96 aa8.33□□□□□ -1.08
TTC3-219ENST00000485402 TYMSOSQ8TAI1 123 aa8.33□□□□□ -1.08
TTC3-219ENST00000485402 CSAG1Q6PB30 78 aa8.32□□□□□ -1.08
TTC3-219ENST00000485402 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
TTC3-219ENST00000485402 KRTAP10-4P60372 401 aaPredicted RBP8.31□□□□□ -1.08
TTC3-219ENST00000485402 EPPK1P58107 5090 aaKnown RBP8.29□□□□□ -1.08
TTC3-219ENST00000485402 Q5VSD8 79 aa8.29□□□□□ -1.08
TTC3-219ENST00000485402 KRTAP16-1A8MUX0 517 aa8.29□□□□□ -1.08
TTC3-219ENST00000485402 KIAA1109Q2LD37 5005 aa8.29□□□□□ -1.08
TTC3-219ENST00000485402 HSPG2P98160 4391 aa8.27□□□□□ -1.09
TTC3-219ENST00000485402 RYR1P21817 5038 aa8.21□□□□□ -1.09
TTC3-219ENST00000485402 KRTAP17-1Q9BYP8 105 aa8.21□□□□□ -1.09
TTC3-219ENST00000485402 LINC00304Q8N9R0 145 aa8.2□□□□□ -1.1
TTC3-219ENST00000485402 C9orf92A6NGG3 77 aa8.2□□□□□ -1.1
TTC3-219ENST00000485402 DMBT1Q9UGM3 2413 aaPredicted RBP8.17□□□□□ -1.1
TTC3-219ENST00000485402 LRP1Q07954 4544 aaKnown RBP8.16□□□□□ -1.1
TTC3-219ENST00000485402 CRIPTQ9P021 101 aa8.12□□□□□ -1.11
TTC3-219ENST00000485402 H0YAA0 97 aa8.08□□□□□ -1.12
TTC3-219ENST00000485402 A0A1B0GU33 70 aa8.06□□□□□ -1.12
TTC3-219ENST00000485402 PKHD1L1Q86WI1 4243 aa8.06□□□□□ -1.12
TTC3-219ENST00000485402 MYCBP2O75592 4640 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms