RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 NDUFC1O43677 76 aa5.31□□□□□ -1.56
CDC42SE1-204ENST00000483763 LINC00483Q53H64 154 aa5.31□□□□□ -1.56
CDC42SE1-204ENST00000483763 A0A087WSZ3 146 aa5.31□□□□□ -1.56
CDC42SE1-204ENST00000483763 FAM229BQ4G0N7 80 aa5.3□□□□□ -1.56
CDC42SE1-204ENST00000483763 A0A1B0GW54 56 aa5.3□□□□□ -1.56
CDC42SE1-204ENST00000483763 A8MUN3 132 aa5.29□□□□□ -1.56
CDC42SE1-204ENST00000483763 BPY2O14599 106 aa5.29□□□□□ -1.56
CDC42SE1-204ENST00000483763 DEFB116Q30KQ4 102 aa5.29□□□□□ -1.56
CDC42SE1-204ENST00000483763 KRTAP4-5Q9BYR2 181 aa5.29□□□□□ -1.56
CDC42SE1-204ENST00000483763 FAT1Q14517 4588 aa5.29□□□□□ -1.56
CDC42SE1-204ENST00000483763 IGKV4-1P06312 121 aa5.28□□□□□ -1.56
CDC42SE1-204ENST00000483763 SNURFQ9Y675 71 aa5.28□□□□□ -1.56
CDC42SE1-204ENST00000483763 DSCR10P59022 87 aa5.27□□□□□ -1.57
CDC42SE1-204ENST00000483763 LCA10Q71F78 164 aa5.27□□□□□ -1.57
CDC42SE1-204ENST00000483763 MOBPQ13875 183 aa5.26□□□□□ -1.57
CDC42SE1-204ENST00000483763 ZNF706Q9Y5V0 76 aaPredicted RBP5.26□□□□□ -1.57
CDC42SE1-204ENST00000483763 Q1T7F1 81 aa5.26□□□□□ -1.57
CDC42SE1-204ENST00000483763 K7EQZ3 153 aa5.24□□□□□ -1.57
CDC42SE1-204ENST00000483763 A0A087X002 238 aa5.23□□□□□ -1.57
CDC42SE1-204ENST00000483763 SMR3BP02814 79 aaPredicted RBP5.23□□□□□ -1.57
CDC42SE1-204ENST00000483763 RPL37AP61513 92 aaKnown RBP5.23□□□□□ -1.57
CDC42SE1-204ENST00000483763 LINC00472Q9H8W2 130 aa5.23□□□□□ -1.57
CDC42SE1-204ENST00000483763 C7orf65Q6ZTY9 151 aa5.22□□□□□ -1.57
CDC42SE1-204ENST00000483763 TMEM254Q8TBM7 123 aa5.22□□□□□ -1.57
CDC42SE1-204ENST00000483763 KRTAP1-4P0C5Y4 121 aa5.2□□□□□ -1.58
CDC42SE1-204ENST00000483763 Q96NJ1 140 aa5.2□□□□□ -1.58
CDC42SE1-204ENST00000483763 KRTAP13-2Q52LG2 175 aa5.2□□□□□ -1.58
CDC42SE1-204ENST00000483763 ATP11AUNQ6ZP68 121 aa5.2□□□□□ -1.58
CDC42SE1-204ENST00000483763 OCR1Q9BZK8 76 aa5.19□□□□□ -1.58
CDC42SE1-204ENST00000483763 A6NN06 94 aa5.19□□□□□ -1.58
CDC42SE1-204ENST00000483763 LINC00313P59037 77 aa5.19□□□□□ -1.58
CDC42SE1-204ENST00000483763 PSPHP1O15172 72 aa5.18□□□□□ -1.58
CDC42SE1-204ENST00000483763 FLG2Q5D862 2391 aaPredicted RBP5.17□□□□□ -1.58
CDC42SE1-204ENST00000483763 MYCBP2O75592 4640 aa5.16□□□□□ -1.58
CDC42SE1-204ENST00000483763 MP68P56378 58 aa5.16□□□□□ -1.58
CDC42SE1-204ENST00000483763 SPTSSBQ8NFR3 76 aa5.16□□□□□ -1.58
CDC42SE1-204ENST00000483763 TRAV22A0A0B4J277 110 aa5.15□□□□□ -1.58
CDC42SE1-204ENST00000483763 A8MWP4 228 aa5.15□□□□□ -1.58
CDC42SE1-204ENST00000483763 KRTAP3-3Q9BYR6 98 aa5.15□□□□□ -1.58
CDC42SE1-204ENST00000483763 KRTAP3-2Q9BYR7 98 aa5.15□□□□□ -1.58
CDC42SE1-204ENST00000483763 A8MU10 97 aa5.15□□□□□ -1.59
CDC42SE1-204ENST00000483763 HCG22E2RYF7 251 aa5.15□□□□□ -1.59
CDC42SE1-204ENST00000483763 LINC01554Q52M75 96 aa5.15□□□□□ -1.59
CDC42SE1-204ENST00000483763 KRTAP10-4P60372 401 aaPredicted RBP5.14□□□□□ -1.59
CDC42SE1-204ENST00000483763 SSBP3-AS1Q7Z2R9 100 aa5.14□□□□□ -1.59
CDC42SE1-204ENST00000483763 WFDC13Q8IUB5 93 aa5.14□□□□□ -1.59
CDC42SE1-204ENST00000483763 hDV103S1A0JD37 113 aa5.14□□□□□ -1.59
CDC42SE1-204ENST00000483763 SEC61BP60468 96 aaKnown RBP5.14□□□□□ -1.59
CDC42SE1-204ENST00000483763 KRTAP29-1A8MX34 341 aaPredicted RBP5.13□□□□□ -1.59
CDC42SE1-204ENST00000483763 HERC1Q15751 4861 aa5.13□□□□□ -1.59
CDC42SE1-204ENST00000483763 CDK2AP2O75956 126 aa5.11□□□□□ -1.59
CDC42SE1-204ENST00000483763 SPINK6Q6UWN8 80 aa5.11□□□□□ -1.59
CDC42SE1-204ENST00000483763 NOTCH2NLQ7Z3S9 236 aa5.11□□□□□ -1.59
CDC42SE1-204ENST00000483763 LRP1Q07954 4544 aaKnown RBP5.11□□□□□ -1.59
CDC42SE1-204ENST00000483763 MMP24-AS1A0A0U1RRL7 71 aa5.1□□□□□ -1.59
CDC42SE1-204ENST00000483763 ZCCHC13Q8WW36 166 aaKnown RBP5.1□□□□□ -1.59
CDC42SE1-204ENST00000483763 CASC2Q6XLA1 102 aa5.09□□□□□ -1.59
CDC42SE1-204ENST00000483763 Q8N1X5 172 aa5.09□□□□□ -1.59
CDC42SE1-204ENST00000483763 IGHV6-1A0A0B4J1U7 121 aa5.08□□□□□ -1.6
CDC42SE1-204ENST00000483763 Q5VV11 94 aa5.08□□□□□ -1.6
CDC42SE1-204ENST00000483763 NDUFB1O75438 58 aa5.08□□□□□ -1.6
CDC42SE1-204ENST00000483763 Q5VSD8 79 aa5.08□□□□□ -1.6
CDC42SE1-204ENST00000483763 A0A1B0GVX0 72 aa5.07□□□□□ -1.6
CDC42SE1-204ENST00000483763 TYMSOSQ8TAI1 123 aa5.07□□□□□ -1.6
CDC42SE1-204ENST00000483763 CHKB-CPT1BH3BT56 60 aa5.07□□□□□ -1.6
CDC42SE1-204ENST00000483763 ASB16-AS1Q495Z4 193 aa5.07□□□□□ -1.6
CDC42SE1-204ENST00000483763 C1orf64Q8NEQ6 169 aa5.07□□□□□ -1.6
CDC42SE1-204ENST00000483763 CYP4F30PQ9H0H9 118 aa5.07□□□□□ -1.6
CDC42SE1-204ENST00000483763 C8orf17Q9NRJ1 99 aa5.06□□□□□ -1.6
CDC42SE1-204ENST00000483763 PKHD1L1Q86WI1 4243 aa5.06□□□□□ -1.6
CDC42SE1-204ENST00000483763 DMBT1Q9UGM3 2413 aaPredicted RBP5.02□□□□□ -1.61
CDC42SE1-204ENST00000483763 SPINK1P00995 79 aa5.01□□□□□ -1.61
CDC42SE1-204ENST00000483763 LIMD2Q9BT23 127 aa5.01□□□□□ -1.61
CDC42SE1-204ENST00000483763 CDC42SE1Q9NRR8 79 aa5.01□□□□□ -1.61
CDC42SE1-204ENST00000483763 LINC00304Q8N9R0 145 aa5□□□□□ -1.61
CDC42SE1-204ENST00000483763 MRPL34Q9BQ48 92 aaKnown RBP4.99□□□□□ -1.61
CDC42SE1-204ENST00000483763 FAT3Q8TDW7 4589 aa4.99□□□□□ -1.61
CDC42SE1-204ENST00000483763 TNXBP22105 4242 aa4.99□□□□□ -1.61
CDC42SE1-204ENST00000483763 A6NED7 52 aa4.99□□□□□ -1.61
CDC42SE1-204ENST00000483763 LCE2DQ5TA82 110 aaPredicted RBP4.98□□□□□ -1.61
CDC42SE1-204ENST00000483763 LINC00208Q96KT6 92 aa4.98□□□□□ -1.61
CDC42SE1-204ENST00000483763 H0Y9P7 68 aa4.97□□□□□ -1.61
CDC42SE1-204ENST00000483763 PRAC1Q96KF2 57 aa4.97□□□□□ -1.61
CDC42SE1-204ENST00000483763 Q5W150 140 aa4.96□□□□□ -1.62
CDC42SE1-204ENST00000483763 KRTAP16-1A8MUX0 517 aa4.95□□□□□ -1.62
CDC42SE1-204ENST00000483763 PRR15LQ9BU68 103 aa4.95□□□□□ -1.62
CDC42SE1-204ENST00000483763 RPS29P62273 56 aaKnown RBP4.94□□□□□ -1.62
CDC42SE1-204ENST00000483763 SPAG11AQ6PDA7 123 aa4.94□□□□□ -1.62
CDC42SE1-204ENST00000483763 SPANXA2-OT1Q8N9U9 137 aa4.94□□□□□ -1.62
CDC42SE1-204ENST00000483763 TP53AIP1Q9HCN2 124 aa4.94□□□□□ -1.62
CDC42SE1-204ENST00000483763 RETNLBQ9BQ08 111 aa4.94□□□□□ -1.62
CDC42SE1-204ENST00000483763 Q8N9P0 234 aaPredicted RBP4.93□□□□□ -1.62
CDC42SE1-204ENST00000483763 PRR4Q16378 134 aa4.92□□□□□ -1.62
CDC42SE1-204ENST00000483763 KRTAP13-3Q3SY46 172 aa4.92□□□□□ -1.62
CDC42SE1-204ENST00000483763 KRTAP10-8P60410 259 aa4.91□□□□□ -1.62
CDC42SE1-204ENST00000483763 LOC101927531A0A1B0GV80 90 aa4.91□□□□□ -1.62
CDC42SE1-204ENST00000483763 H3BPC8 53 aa4.9□□□□□ -1.62
CDC42SE1-204ENST00000483763 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
CDC42SE1-204ENST00000483763 PCOTHQ58A44 107 aa4.88□□□□□ -1.63
CDC42SE1-204ENST00000483763 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms