RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 SFTA3P0C7M3 94 aa1.52□□□□□ -2.17
SMC6-208ENST00000481708 ETDBQ3ZM63 59 aa1.52□□□□□ -2.17
SMC6-208ENST00000481708 SPINK9Q5DT21 86 aa1.52□□□□□ -2.17
SMC6-208ENST00000481708 C10orf113Q5VZT2 155 aa1.52□□□□□ -2.17
SMC6-208ENST00000481708 C2orf82Q6UX34 121 aa1.52□□□□□ -2.17
SMC6-208ENST00000481708 TVP23CQ96ET8 276 aa1.52□□□□□ -2.17
SMC6-208ENST00000481708 PRO0461Q9UI25 63 aa1.52□□□□□ -2.17
SMC6-208ENST00000481708 TRGV4A0A0C4DH28 118 aa1.52□□□□□ -2.17
SMC6-208ENST00000481708 APOC3P02656 99 aa1.52□□□□□ -2.17
SMC6-208ENST00000481708 ARL14EPLP0DKL9 152 aa1.52□□□□□ -2.17
SMC6-208ENST00000481708 KRTAP10-10P60014 251 aa1.52□□□□□ -2.17
SMC6-208ENST00000481708 TRBV10-1A0A0K0K1A3 114 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 SYS1-DBNDD2H3BUS1 97 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 UBE2D3P61077 147 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 UBE2D2P62837 147 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 KRTAP13-3Q3SY46 172 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 KRTAP4-1Q9BYQ7 146 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 LENEPQ9Y5L5 61 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 APELAP0DMC3 54 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 TRBV7-3A0A075B6L6 115 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 SMIM27A0A1W2PRY6 76 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 KRTAP13-4Q3LI77 160 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 FAM103A1Q9BTL3 118 aaKnown RBP1.51□□□□□ -2.17
SMC6-208ENST00000481708 CDC42SE2Q9NRR3 84 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 RABAC1Q9UI14 185 aa1.51□□□□□ -2.17
SMC6-208ENST00000481708 PRH1P02810 166 aa1.5□□□□□ -2.17
SMC6-208ENST00000481708 SERP2Q8N6R1 65 aa1.5□□□□□ -2.17
SMC6-208ENST00000481708 CNFNQ9BYD5 112 aa1.5□□□□□ -2.17
SMC6-208ENST00000481708 LINC01546A6NGU7 62 aa1.5□□□□□ -2.17
SMC6-208ENST00000481708 CCL18P55774 89 aa1.5□□□□□ -2.17
SMC6-208ENST00000481708 DEFA5Q01523 94 aa1.5□□□□□ -2.17
SMC6-208ENST00000481708 V9GYV3 84 aa1.5□□□□□ -2.17
SMC6-208ENST00000481708 C7orf77A4D0Y5 90 aa1.5□□□□□ -2.17
SMC6-208ENST00000481708 ATP5EP56381 51 aaPredicted RBP1.5□□□□□ -2.17
SMC6-208ENST00000481708 COA5Q86WW8 74 aa1.5□□□□□ -2.17
SMC6-208ENST00000481708 TMEM263Q8WUH6 116 aaKnown RBP1.5□□□□□ -2.17
SMC6-208ENST00000481708 SMCO4Q9NRQ5 59 aa1.5□□□□□ -2.17
SMC6-208ENST00000481708 GNG13Q9P2W3 67 aa1.5□□□□□ -2.17
SMC6-208ENST00000481708 SPINK6Q6UWN8 80 aa1.49□□□□□ -2.17
SMC6-208ENST00000481708 LINC00208Q96KT6 92 aa1.49□□□□□ -2.17
SMC6-208ENST00000481708 IGKV2-29A2NJV5 120 aaPredicted RBP1.49□□□□□ -2.17
SMC6-208ENST00000481708 CRIP1P50238 77 aa1.49□□□□□ -2.17
SMC6-208ENST00000481708 Q86TA4 180 aa1.49□□□□□ -2.17
SMC6-208ENST00000481708 DMAC1Q96GE9 116 aa1.49□□□□□ -2.17
SMC6-208ENST00000481708 TRBV6-5A0A0K0K1A5 114 aa1.49□□□□□ -2.17
SMC6-208ENST00000481708 CYP4F30PQ9H0H9 118 aa1.49□□□□□ -2.17
SMC6-208ENST00000481708 NEBP20929 6669 aa1.49□□□□□ -2.17
SMC6-208ENST00000481708 JMJD7-PLA2G4BH0Y9G9 81 aa1.48□□□□□ -2.17
SMC6-208ENST00000481708 ATOX1O00244 68 aa1.48□□□□□ -2.17
SMC6-208ENST00000481708 DNAL4O96015 105 aa1.48□□□□□ -2.17
SMC6-208ENST00000481708 CHKB-CPT1BH3BT56 60 aa1.48□□□□□ -2.17
SMC6-208ENST00000481708 RHPN1-AS1Q9BWJ2 59 aa1.48□□□□□ -2.17
SMC6-208ENST00000481708 TRAV23DV6A0A075B6W5 121 aa1.47□□□□□ -2.17
SMC6-208ENST00000481708 NXT2Q9NPJ8 142 aaKnown RBP1.47□□□□□ -2.17
SMC6-208ENST00000481708 DEFB130BP0DP73 79 aa1.47□□□□□ -2.17
SMC6-208ENST00000481708 DEFB130AP0DP74 79 aa1.47□□□□□ -2.17
SMC6-208ENST00000481708 HTN1P15515 57 aa1.47□□□□□ -2.17
SMC6-208ENST00000481708 BAGE2Q86Y30 109 aa1.47□□□□□ -2.17
SMC6-208ENST00000481708 OBSCN-AS1Q96MR7 158 aa1.47□□□□□ -2.17
SMC6-208ENST00000481708 Q96NJ1 140 aa1.47□□□□□ -2.17
SMC6-208ENST00000481708 F2Z2F3 143 aa1.47□□□□□ -2.17
SMC6-208ENST00000481708 SPART-AS1P0CW21 52 aa1.47□□□□□ -2.17
SMC6-208ENST00000481708 PP632Q6XCG6 107 aa1.46□□□□□ -2.18
SMC6-208ENST00000481708 IGKV2-24A0A0C4DH68 120 aa1.46□□□□□ -2.18
SMC6-208ENST00000481708 H3BRM9 83 aa1.46□□□□□ -2.18
SMC6-208ENST00000481708 BVES-AS1Q5T3Y7 98 aa1.46□□□□□ -2.18
SMC6-208ENST00000481708 GDF5OSQ5U4N7 250 aa1.46□□□□□ -2.18
SMC6-208ENST00000481708 KRTAP5-2Q701N4 177 aa1.46□□□□□ -2.18
SMC6-208ENST00000481708 A0A1W2PPM0 123 aa1.46□□□□□ -2.18
SMC6-208ENST00000481708 KRTAP12-1P59990 96 aa1.46□□□□□ -2.18
SMC6-208ENST00000481708 ADIRFQ15847 76 aa1.46□□□□□ -2.18
SMC6-208ENST00000481708 PCOTHQ58A44 107 aa1.46□□□□□ -2.18
SMC6-208ENST00000481708 SPCS1Q9Y6A9 102 aa1.46□□□□□ -2.18
SMC6-208ENST00000481708 TRAV21A0A0B4J279 112 aa1.45□□□□□ -2.18
SMC6-208ENST00000481708 K7EMI3 77 aa1.45□□□□□ -2.18
SMC6-208ENST00000481708 M0R3E3 92 aa1.45□□□□□ -2.18
SMC6-208ENST00000481708 IGLC3P0DOY3 106 aa1.45□□□□□ -2.18
SMC6-208ENST00000481708 UQCR10Q9UDW1 63 aa1.45□□□□□ -2.18
SMC6-208ENST00000481708 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
SMC6-208ENST00000481708 IGKV2-40A0A087WW87 121 aaPredicted RBP1.45□□□□□ -2.18
SMC6-208ENST00000481708 IGKV2D-40P01614 121 aaPredicted RBP1.45□□□□□ -2.18
SMC6-208ENST00000481708 LOC110117498A0A087WWA1 95 aa1.45□□□□□ -2.18
SMC6-208ENST00000481708 HIGD1CA8MV81 97 aa1.45□□□□□ -2.18
SMC6-208ENST00000481708 DEFB131AP59861 70 aa1.45□□□□□ -2.18
SMC6-208ENST00000481708 ELOF1P60002 83 aaKnown RBP1.45□□□□□ -2.18
SMC6-208ENST00000481708 KLKP1Q107X0 134 aa1.45□□□□□ -2.18
SMC6-208ENST00000481708 INE1O15225 51 aa1.44□□□□□ -2.18
SMC6-208ENST00000481708 RPL37AP61513 92 aaKnown RBP1.44□□□□□ -2.18
SMC6-208ENST00000481708 ZNF56Q15929 161 aa1.44□□□□□ -2.18
SMC6-208ENST00000481708 CFAP126Q5VTH2 177 aa1.44□□□□□ -2.18
SMC6-208ENST00000481708 COX7B2Q8TF08 81 aa1.44□□□□□ -2.18
SMC6-208ENST00000481708 A0A1B0GUT8 65 aa1.44□□□□□ -2.18
SMC6-208ENST00000481708 GVQW2A0A096LPI5 108 aaPredicted RBP1.44□□□□□ -2.18
SMC6-208ENST00000481708 ARMS2P0C7Q2 107 aa1.43□□□□□ -2.18
SMC6-208ENST00000481708 C18orf32Q8TCD1 76 aa1.43□□□□□ -2.18
SMC6-208ENST00000481708 PRO1854Q9UHT4 67 aa1.43□□□□□ -2.18
SMC6-208ENST00000481708 LINC01549A6NIU2 74 aa1.43□□□□□ -2.18
SMC6-208ENST00000481708 PPP1R17O96001 155 aa1.43□□□□□ -2.18
SMC6-208ENST00000481708 PSMG4Q5JS54 123 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms