RNA–Protein interactions for RNA: ENST00000481238.1

TMED4-205, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 1 (best) BASIC

Gene TMED4, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-205ENST00000481238 hDV103S1A0JD37 113 aa13□□□□□ -0.33
TMED4-205ENST00000481238 HSPG2P98160 4391 aa13□□□□□ -0.33
TMED4-205ENST00000481238 C20orf197Q8N268 126 aa12.99□□□□□ -0.33
TMED4-205ENST00000481238 RPS29P62273 56 aaKnown RBP12.99□□□□□ -0.33
TMED4-205ENST00000481238 PKHD1L1Q86WI1 4243 aa12.98□□□□□ -0.33
TMED4-205ENST00000481238 RYR1P21817 5038 aa12.96□□□□□ -0.33
TMED4-205ENST00000481238 NOTCH2NLQ7Z3S9 236 aa12.93□□□□□ -0.34
TMED4-205ENST00000481238 CYSTM1Q9H1C7 97 aa12.93□□□□□ -0.34
TMED4-205ENST00000481238 KLKP1Q107X0 134 aa12.92□□□□□ -0.34
TMED4-205ENST00000481238 TMEM254Q8TBM7 123 aa12.92□□□□□ -0.34
TMED4-205ENST00000481238 C8orf87E5RJ46 101 aa12.9□□□□□ -0.34
TMED4-205ENST00000481238 C5orf47Q569G3 176 aa12.89□□□□□ -0.35
TMED4-205ENST00000481238 SNURFQ9Y675 71 aa12.88□□□□□ -0.35
TMED4-205ENST00000481238 MRPL34Q9BQ48 92 aaKnown RBP12.87□□□□□ -0.35
TMED4-205ENST00000481238 KRTAP17-1Q9BYP8 105 aa12.87□□□□□ -0.35
TMED4-205ENST00000481238 A0A0U1RQV1 116 aa12.86□□□□□ -0.35
TMED4-205ENST00000481238 LINC00313P59037 77 aa12.84□□□□□ -0.35
TMED4-205ENST00000481238 Q8N1X5 172 aa12.83□□□□□ -0.36
TMED4-205ENST00000481238 TP53AIP1Q9HCN2 124 aa12.82□□□□□ -0.36
TMED4-205ENST00000481238 EPPK1P58107 5090 aaKnown RBP12.79□□□□□ -0.36
TMED4-205ENST00000481238 KRTAP10-8P60410 259 aa12.79□□□□□ -0.36
TMED4-205ENST00000481238 NDUFC1O43677 76 aa12.78□□□□□ -0.36
TMED4-205ENST00000481238 H7BZZ5 65 aa12.77□□□□□ -0.36
TMED4-205ENST00000481238 MP68P56378 58 aa12.77□□□□□ -0.36
TMED4-205ENST00000481238 KIAA1109Q2LD37 5005 aa12.77□□□□□ -0.37
TMED4-205ENST00000481238 NDUFS5O43920 106 aa12.76□□□□□ -0.37
TMED4-205ENST00000481238 TMEM258P61165 79 aa12.76□□□□□ -0.37
TMED4-205ENST00000481238 ZCCHC13Q8WW36 166 aaKnown RBP12.75□□□□□ -0.37
TMED4-205ENST00000481238 H0Y9P7 68 aa12.74□□□□□ -0.37
TMED4-205ENST00000481238 H3BPC8 53 aa12.72□□□□□ -0.37
TMED4-205ENST00000481238 TRAV22A0A0B4J277 110 aa12.71□□□□□ -0.37
TMED4-205ENST00000481238 KRTAP16-1A8MUX0 517 aa12.69□□□□□ -0.38
TMED4-205ENST00000481238 Q8N9P0 234 aaPredicted RBP12.69□□□□□ -0.38
TMED4-205ENST00000481238 LINC00208Q96KT6 92 aa12.69□□□□□ -0.38
TMED4-205ENST00000481238 TNXBP22105 4242 aa12.67□□□□□ -0.38
TMED4-205ENST00000481238 LRP1Q07954 4544 aaKnown RBP12.65□□□□□ -0.38
TMED4-205ENST00000481238 C1orf64Q8NEQ6 169 aa12.63□□□□□ -0.39
TMED4-205ENST00000481238 FAT3Q8TDW7 4589 aa12.61□□□□□ -0.39
TMED4-205ENST00000481238 FAM236DA0A1B0GTK5 79 aa12.58□□□□□ -0.39
TMED4-205ENST00000481238 FAM236CP0DP71 79 aa12.58□□□□□ -0.39
TMED4-205ENST00000481238 FLG2Q5D862 2391 aaPredicted RBP12.58□□□□□ -0.4
TMED4-205ENST00000481238 Q5W150 140 aa12.58□□□□□ -0.4
TMED4-205ENST00000481238 RETNLBQ9BQ08 111 aa12.58□□□□□ -0.4
TMED4-205ENST00000481238 KRTAP13-3Q3SY46 172 aa12.56□□□□□ -0.4
TMED4-205ENST00000481238 MT1HL1P0DM35 61 aa12.56□□□□□ -0.4
TMED4-205ENST00000481238 ATP5EP56381 51 aaPredicted RBP12.52□□□□□ -0.41
TMED4-205ENST00000481238 OXTP01178 125 aa12.49□□□□□ -0.41
TMED4-205ENST00000481238 KRTAP4-5Q9BYR2 181 aa12.47□□□□□ -0.41
TMED4-205ENST00000481238 LOC101927531A0A1B0GV80 90 aa12.46□□□□□ -0.41
TMED4-205ENST00000481238 C9orf92A6NGG3 77 aa12.46□□□□□ -0.41
TMED4-205ENST00000481238 RPS28P62857 69 aaKnown RBP12.45□□□□□ -0.42
TMED4-205ENST00000481238 FP248Q71RG6 208 aaPredicted RBP12.45□□□□□ -0.42
TMED4-205ENST00000481238 C20orf166-AS1Q96NR2 134 aa12.41□□□□□ -0.42
TMED4-205ENST00000481238 SPANXA2-OT1Q8N9U9 137 aa12.41□□□□□ -0.42
TMED4-205ENST00000481238 A8MUU9 505 aa12.4□□□□□ -0.42
TMED4-205ENST00000481238 MYCBP2O75592 4640 aa12.4□□□□□ -0.43
TMED4-205ENST00000481238 PCOTHQ58A44 107 aa12.38□□□□□ -0.43
TMED4-205ENST00000481238 CYP4F30PQ9H0H9 118 aa12.38□□□□□ -0.43
TMED4-205ENST00000481238 DMBT1Q9UGM3 2413 aaPredicted RBP12.38□□□□□ -0.43
TMED4-205ENST00000481238 SERP1Q9Y6X1 66 aa12.37□□□□□ -0.43
TMED4-205ENST00000481238 IGKV2-30P06310 120 aa12.34□□□□□ -0.43
TMED4-205ENST00000481238 IGLV7-46A0A075B6I9 117 aa12.33□□□□□ -0.44
TMED4-205ENST00000481238 BIRC6Q9NR09 4857 aa12.31□□□□□ -0.44
TMED4-205ENST00000481238 PRR4Q16378 134 aa12.3□□□□□ -0.44
TMED4-205ENST00000481238 Q75L30 129 aa12.28□□□□□ -0.44
TMED4-205ENST00000481238 IGKV2D-30A0A075B6S6 120 aa12.23□□□□□ -0.45
TMED4-205ENST00000481238 HERC2O95714 4834 aa12.19□□□□□ -0.46
TMED4-205ENST00000481238 HRES1P13985 223 aa12.18□□□□□ -0.46
TMED4-205ENST00000481238 C7orf65Q6ZTY9 151 aa12.16□□□□□ -0.46
TMED4-205ENST00000481238 XP32Q5T750 250 aa12.14□□□□□ -0.47
TMED4-205ENST00000481238 ABCA13Q86UQ4 5058 aa12.13□□□□□ -0.47
TMED4-205ENST00000481238 RPL37P61927 97 aaKnown RBP12.11□□□□□ -0.47
TMED4-205ENST00000481238 J3QL48 77 aa12.09□□□□□ -0.47
TMED4-205ENST00000481238 ATP11AUNQ6ZP68 121 aa12.08□□□□□ -0.48
TMED4-205ENST00000481238 SMIM26A0A096LP01 95 aa12.07□□□□□ -0.48
TMED4-205ENST00000481238 TPRXLQ17RH7 258 aa12.06□□□□□ -0.48
TMED4-205ENST00000481238 SPINK7P58062 85 aa12.02□□□□□ -0.48
TMED4-205ENST00000481238 COA5Q86WW8 74 aa12.02□□□□□ -0.48
TMED4-205ENST00000481238 DMAC1Q96GE9 116 aa12.02□□□□□ -0.48
TMED4-205ENST00000481238 ACYP2P14621 99 aa12□□□□□ -0.49
TMED4-205ENST00000481238 C4orf26Q17RF5 130 aa11.9□□□□□ -0.5
TMED4-205ENST00000481238 A8MUN3 132 aa11.86□□□□□ -0.51
TMED4-205ENST00000481238 MPLKIPQ8TAP9 179 aa11.83□□□□□ -0.52
TMED4-205ENST00000481238 Q1T7F1 81 aa11.81□□□□□ -0.52
TMED4-205ENST00000481238 CHKB-CPT1BH3BT56 60 aa11.79□□□□□ -0.52
TMED4-205ENST00000481238 KRTAP3-1Q9BYR8 98 aa11.77□□□□□ -0.53
TMED4-205ENST00000481238 LPAP08519 4548 aa11.76□□□□□ -0.53
TMED4-205ENST00000481238 COX6B2Q6YFQ2 88 aa11.74□□□□□ -0.53
TMED4-205ENST00000481238 V9GYY9 64 aa11.74□□□□□ -0.53
TMED4-205ENST00000481238 LRP2P98164 4655 aa11.73□□□□□ -0.53
TMED4-205ENST00000481238 PCLOQ9Y6V0 5065 aa11.69□□□□□ -0.54
TMED4-205ENST00000481238 SEC61BP60468 96 aaKnown RBP11.64□□□□□ -0.55
TMED4-205ENST00000481238 LINC01558Q9Y6Z2 57 aa11.62□□□□□ -0.55
TMED4-205ENST00000481238 PSPHP1O15172 72 aa11.56□□□□□ -0.56
TMED4-205ENST00000481238 PRR15LQ9BU68 103 aa11.52□□□□□ -0.57
TMED4-205ENST00000481238 SPTSSBQ8NFR3 76 aa11.51□□□□□ -0.57
TMED4-205ENST00000481238 Q5VV11 94 aa11.47□□□□□ -0.57
TMED4-205ENST00000481238 RBM12B-AS1Q9P1G2 102 aa11.46□□□□□ -0.58
TMED4-205ENST00000481238 MUC17Q685J3 4493 aa11.42□□□□□ -0.58
TMED4-205ENST00000481238 H1FX-AS1Q4G0G2 97 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms