RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 TRAV21A0A0B4J279 112 aa3.67□□□□□ -1.82
CBX3-206ENST00000481057 IGKV1-16P04430 117 aa3.67□□□□□ -1.82
CBX3-206ENST00000481057 SAA2P0DJI9 122 aaPredicted RBP3.67□□□□□ -1.82
CBX3-206ENST00000481057 CRIP1P50238 77 aa3.67□□□□□ -1.82
CBX3-206ENST00000481057 DEFB130BP0DP73 79 aa3.66□□□□□ -1.82
CBX3-206ENST00000481057 DEFB130AP0DP74 79 aa3.66□□□□□ -1.82
CBX3-206ENST00000481057 RPL27AP46776 148 aaKnown RBP3.66□□□□□ -1.82
CBX3-206ENST00000481057 FAM74A4Q5TZK3 123 aa3.66□□□□□ -1.82
CBX3-206ENST00000481057 ZNF706Q9Y5V0 76 aaPredicted RBP3.66□□□□□ -1.82
CBX3-206ENST00000481057 IGHV3-43A0A0B4J1X8 118 aa3.65□□□□□ -1.83
CBX3-206ENST00000481057 LOC101927531A0A1B0GV80 90 aa3.65□□□□□ -1.83
CBX3-206ENST00000481057 A6NED7 52 aa3.65□□□□□ -1.83
CBX3-206ENST00000481057 CRPP02741 224 aa3.65□□□□□ -1.83
CBX3-206ENST00000481057 IGHV3-30-3P0DP02 117 aa3.65□□□□□ -1.83
CBX3-206ENST00000481057 IGHV3-43DP0DP04 118 aa3.65□□□□□ -1.83
CBX3-206ENST00000481057 C1orf64Q8NEQ6 169 aa3.65□□□□□ -1.83
CBX3-206ENST00000481057 IGKV1D-37A0A075B6S9 117 aa3.64□□□□□ -1.83
CBX3-206ENST00000481057 LOC110117498A0A087WWA1 95 aa3.64□□□□□ -1.83
CBX3-206ENST00000481057 BPY2O14599 106 aa3.64□□□□□ -1.83
CBX3-206ENST00000481057 NDUFA1O15239 70 aa3.64□□□□□ -1.83
CBX3-206ENST00000481057 CTSGP08311 255 aa3.64□□□□□ -1.83
CBX3-206ENST00000481057 Q9BRP9 147 aa3.64□□□□□ -1.83
CBX3-206ENST00000481057 CDC42SE2Q9NRR3 84 aa3.64□□□□□ -1.83
CBX3-206ENST00000481057 H3BRN7 92 aa3.63□□□□□ -1.83
CBX3-206ENST00000481057 LINC00308Q8TCZ7 52 aa3.63□□□□□ -1.83
CBX3-206ENST00000481057 XAGE1AQ9HD64 81 aa3.63□□□□□ -1.83
CBX3-206ENST00000481057 NDUFA4L2Q9NRX3 87 aa3.63□□□□□ -1.83
CBX3-206ENST00000481057 MIR7-3HGQ8N6C7 128 aa3.62□□□□□ -1.83
CBX3-206ENST00000481057 ZNF625Q96I27 306 aaPredicted RBP3.62□□□□□ -1.83
CBX3-206ENST00000481057 RETNLBQ9BQ08 111 aa3.62□□□□□ -1.83
CBX3-206ENST00000481057 LINC00467Q9BRT7 94 aa3.62□□□□□ -1.83
CBX3-206ENST00000481057 KRTAP4-1Q9BYQ7 146 aa3.62□□□□□ -1.83
CBX3-206ENST00000481057 TRBV6-5A0A0K0K1A5 114 aa3.61□□□□□ -1.83
CBX3-206ENST00000481057 PRR15LQ9BU68 103 aa3.61□□□□□ -1.83
CBX3-206ENST00000481057 NCR3O14931 201 aa3.6□□□□□ -1.83
CBX3-206ENST00000481057 LECT2O14960 151 aa3.6□□□□□ -1.83
CBX3-206ENST00000481057 CNBPP62633 177 aaKnown RBP3.6□□□□□ -1.83
CBX3-206ENST00000481057 MOBPQ13875 183 aa3.6□□□□□ -1.83
CBX3-206ENST00000481057 SPANXA2-OT1Q8N9U9 137 aa3.6□□□□□ -1.83
CBX3-206ENST00000481057 RHPN1-AS1Q9BWJ2 59 aa3.6□□□□□ -1.83
CBX3-206ENST00000481057 LENEPQ9Y5L5 61 aa3.6□□□□□ -1.83
CBX3-206ENST00000481057 IGHV7-4-1A0A0J9YVY3 117 aa3.59□□□□□ -1.83
CBX3-206ENST00000481057 M0R2T5 61 aa3.59□□□□□ -1.83
CBX3-206ENST00000481057 POLR2KP53803 58 aaKnown RBP3.59□□□□□ -1.83
CBX3-206ENST00000481057 SPINK6Q6UWN8 80 aa3.59□□□□□ -1.83
CBX3-206ENST00000481057 TMEM167AQ8TBQ9 72 aa3.59□□□□□ -1.83
CBX3-206ENST00000481057 RNF5Q99942 180 aa3.59□□□□□ -1.83
CBX3-206ENST00000481057 A0A096LPF7 62 aa3.58□□□□□ -1.84
CBX3-206ENST00000481057 IGHV3-49A0A0A0MS15 119 aa3.58□□□□□ -1.84
CBX3-206ENST00000481057 TRBV10-1A0A0K0K1A3 114 aa3.58□□□□□ -1.84
CBX3-206ENST00000481057 H3BNG1 76 aa3.58□□□□□ -1.84
CBX3-206ENST00000481057 CAMK2N1Q7Z7J9 78 aa3.58□□□□□ -1.84
CBX3-206ENST00000481057 PSORS1C2Q9UIG4 136 aa3.58□□□□□ -1.84
CBX3-206ENST00000481057 Q6ZQT0 140 aa3.57□□□□□ -1.84
CBX3-206ENST00000481057 ZCCHC13Q8WW36 166 aaKnown RBP3.57□□□□□ -1.84
CBX3-206ENST00000481057 LINC00208Q96KT6 92 aa3.57□□□□□ -1.84
CBX3-206ENST00000481057 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
CBX3-206ENST00000481057 KLK9Q9UKQ9 250 aa3.57□□□□□ -1.84
CBX3-206ENST00000481057 IGHV3-74A0A0B4J1X5 117 aa3.56□□□□□ -1.84
CBX3-206ENST00000481057 IGKV2-29A2NJV5 120 aaPredicted RBP3.56□□□□□ -1.84
CBX3-206ENST00000481057 MGPP08493 103 aa3.56□□□□□ -1.84
CBX3-206ENST00000481057 KRTAP19-2Q3LHN2 52 aa3.56□□□□□ -1.84
CBX3-206ENST00000481057 RPL39P5Q59GN2 51 aa3.56□□□□□ -1.84
CBX3-206ENST00000481057 IGHV3-64A0A075B6Q5 118 aa3.55□□□□□ -1.84
CBX3-206ENST00000481057 IGKV2D-24A0A075B6R9 120 aa3.55□□□□□ -1.84
CBX3-206ENST00000481057 IGKV2-40A0A087WW87 121 aaPredicted RBP3.55□□□□□ -1.84
CBX3-206ENST00000481057 H3BPC8 53 aa3.55□□□□□ -1.84
CBX3-206ENST00000481057 IGKV2D-40P01614 121 aaPredicted RBP3.55□□□□□ -1.84
CBX3-206ENST00000481057 WT1-ASQ06250 92 aa3.55□□□□□ -1.84
CBX3-206ENST00000481057 RPL39LQ96EH5 51 aaKnown RBP3.55□□□□□ -1.84
CBX3-206ENST00000481057 HIGD2AQ9BW72 106 aa3.55□□□□□ -1.84
CBX3-206ENST00000481057 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
CBX3-206ENST00000481057 NDUFA4O00483 81 aa3.54□□□□□ -1.84
CBX3-206ENST00000481057 WFDC10BQ8IUB3 73 aa3.54□□□□□ -1.84
CBX3-206ENST00000481057 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
CBX3-206ENST00000481057 LINC01558Q9Y6Z2 57 aa3.54□□□□□ -1.84
CBX3-206ENST00000481057 IGHV3-73A0A0B4J1V6 119 aa3.53□□□□□ -1.84
CBX3-206ENST00000481057 RPL39P62891 51 aaKnown RBP3.53□□□□□ -1.84
CBX3-206ENST00000481057 REG3AQ06141 175 aa3.53□□□□□ -1.84
CBX3-206ENST00000481057 NTM-AS1Q6ZSK4 140 aa3.53□□□□□ -1.84
CBX3-206ENST00000481057 Q8TAT8 98 aa3.53□□□□□ -1.84
CBX3-206ENST00000481057 SMIM11BQ8TCY0 68 aa3.53□□□□□ -1.84
CBX3-206ENST00000481057 RNASE13Q5GAN3 156 aaKnown RBP3.52□□□□□ -1.85
CBX3-206ENST00000481057 SND1-IT1Q9HBX3 110 aa3.52□□□□□ -1.85
CBX3-206ENST00000481057 ETDCA0A1B0GVM5 59 aa3.51□□□□□ -1.85
CBX3-206ENST00000481057 COX7B2Q8TF08 81 aa3.51□□□□□ -1.85
CBX3-206ENST00000481057 IGKV1-17P01599 117 aa3.5□□□□□ -1.85
CBX3-206ENST00000481057 IGKV4-1P06312 121 aa3.5□□□□□ -1.85
CBX3-206ENST00000481057 KRTAP19-6Q3LI70 58 aa3.5□□□□□ -1.85
CBX3-206ENST00000481057 PLAC8Q9NZF1 115 aa3.5□□□□□ -1.85
CBX3-206ENST00000481057 IGKV2-28A0A075B6P5 120 aa3.49□□□□□ -1.85
CBX3-206ENST00000481057 TRGV2A0A075B6R0 118 aa3.49□□□□□ -1.85
CBX3-206ENST00000481057 I3L2K1 104 aa3.49□□□□□ -1.85
CBX3-206ENST00000481057 IGKV2D-28P01615 120 aa3.49□□□□□ -1.85
CBX3-206ENST00000481057 TPRXLQ17RH7 258 aa3.49□□□□□ -1.85
CBX3-206ENST00000481057 KRTAP5-5Q701N2 237 aaPredicted RBP3.49□□□□□ -1.85
CBX3-206ENST00000481057 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.48□□□□□ -1.85
CBX3-206ENST00000481057 IGHV3-66A0A0C4DH42 116 aa3.48□□□□□ -1.85
CBX3-206ENST00000481057 IGHV3-53P01767 116 aa3.48□□□□□ -1.85
CBX3-206ENST00000481057 ROMO1P60602 79 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms