RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 LCE3BQ5TA77 95 aa5□□□□□ -1.61
NUDCD3-208ENST00000480209 HMCN2Q8NDA2 5059 aa5□□□□□ -1.61
NUDCD3-208ENST00000480209 IGKV4-1P06312 121 aa4.98□□□□□ -1.61
NUDCD3-208ENST00000480209 NREPQ16612 68 aa4.98□□□□□ -1.61
NUDCD3-208ENST00000480209 SIGMAR1Q99720 223 aa4.98□□□□□ -1.61
NUDCD3-208ENST00000480209 ACYP1P07311 99 aa4.97□□□□□ -1.61
NUDCD3-208ENST00000480209 DSCR10P59022 87 aa4.97□□□□□ -1.61
NUDCD3-208ENST00000480209 PRR4Q16378 134 aa4.97□□□□□ -1.61
NUDCD3-208ENST00000480209 FP248Q71RG6 208 aaPredicted RBP4.97□□□□□ -1.61
NUDCD3-208ENST00000480209 IGLV7-46A0A075B6I9 117 aa4.96□□□□□ -1.62
NUDCD3-208ENST00000480209 KRTAP4-12Q9BQ66 201 aa4.96□□□□□ -1.62
NUDCD3-208ENST00000480209 UBL5Q9BZL1 73 aa4.96□□□□□ -1.62
NUDCD3-208ENST00000480209 Q8N9L7 120 aa4.95□□□□□ -1.62
NUDCD3-208ENST00000480209 IGKV3D-7A0A0C4DH55 119 aa4.94□□□□□ -1.62
NUDCD3-208ENST00000480209 J3QR89 54 aa4.94□□□□□ -1.62
NUDCD3-208ENST00000480209 K7EQZ3 153 aa4.94□□□□□ -1.62
NUDCD3-208ENST00000480209 K7ERU9 68 aa4.94□□□□□ -1.62
NUDCD3-208ENST00000480209 KRTAP13-3Q3SY46 172 aa4.94□□□□□ -1.62
NUDCD3-208ENST00000480209 NOTCH2NLQ7Z3S9 236 aa4.94□□□□□ -1.62
NUDCD3-208ENST00000480209 C9orf92A6NGG3 77 aa4.93□□□□□ -1.62
NUDCD3-208ENST00000480209 J3KT08 172 aa4.93□□□□□ -1.62
NUDCD3-208ENST00000480209 BPY2O14599 106 aa4.93□□□□□ -1.62
NUDCD3-208ENST00000480209 A0A1B0GVX0 72 aa4.92□□□□□ -1.62
NUDCD3-208ENST00000480209 A8MWP4 228 aa4.92□□□□□ -1.62
NUDCD3-208ENST00000480209 IGHV6-1A0A0B4J1U7 121 aa4.91□□□□□ -1.62
NUDCD3-208ENST00000480209 TPRXLQ17RH7 258 aa4.91□□□□□ -1.62
NUDCD3-208ENST00000480209 CXCL6P80162 114 aa4.9□□□□□ -1.63
NUDCD3-208ENST00000480209 PRR15Q8IV56 129 aa4.9□□□□□ -1.63
NUDCD3-208ENST00000480209 MUC17Q685J3 4493 aa4.89□□□□□ -1.63
NUDCD3-208ENST00000480209 MMP24-AS1A0A0U1RRL7 71 aa4.89□□□□□ -1.63
NUDCD3-208ENST00000480209 KRTAP16-1A8MUX0 517 aa4.89□□□□□ -1.63
NUDCD3-208ENST00000480209 LRP2P98164 4655 aa4.89□□□□□ -1.63
NUDCD3-208ENST00000480209 ATP5EP2Q5VTU8 51 aa4.89□□□□□ -1.63
NUDCD3-208ENST00000480209 LINC00643Q86TS7 51 aa4.89□□□□□ -1.63
NUDCD3-208ENST00000480209 C8orf17Q9NRJ1 99 aa4.88□□□□□ -1.63
NUDCD3-208ENST00000480209 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
NUDCD3-208ENST00000480209 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
NUDCD3-208ENST00000480209 UBR4Q5T4S7 5183 aa4.87□□□□□ -1.63
NUDCD3-208ENST00000480209 C8orf87E5RJ46 101 aa4.86□□□□□ -1.63
NUDCD3-208ENST00000480209 NDUFB1O75438 58 aa4.86□□□□□ -1.63
NUDCD3-208ENST00000480209 MT-ATP8P03928 68 aa4.86□□□□□ -1.63
NUDCD3-208ENST00000480209 LINC00313P59037 77 aa4.86□□□□□ -1.63
NUDCD3-208ENST00000480209 KRTAP19-1Q8IUB9 90 aa4.86□□□□□ -1.63
NUDCD3-208ENST00000480209 A0A087WVE0 104 aa4.85□□□□□ -1.63
NUDCD3-208ENST00000480209 WFDC13Q8IUB5 93 aa4.83□□□□□ -1.64
NUDCD3-208ENST00000480209 HCG22E2RYF7 251 aa4.82□□□□□ -1.64
NUDCD3-208ENST00000480209 HIST1H4AP62805 103 aaKnown RBP4.82□□□□□ -1.64
NUDCD3-208ENST00000480209 C20orf166-AS1Q96NR2 134 aa4.82□□□□□ -1.64
NUDCD3-208ENST00000480209 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
NUDCD3-208ENST00000480209 hDV103S1A0JD37 113 aa4.81□□□□□ -1.64
NUDCD3-208ENST00000480209 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
NUDCD3-208ENST00000480209 A8MUU9 505 aa4.81□□□□□ -1.64
NUDCD3-208ENST00000480209 PCP4P48539 62 aa4.81□□□□□ -1.64
NUDCD3-208ENST00000480209 RPL37P61927 97 aaKnown RBP4.81□□□□□ -1.64
NUDCD3-208ENST00000480209 CASC2Q6XLA1 102 aa4.81□□□□□ -1.64
NUDCD3-208ENST00000480209 TMEM254Q8TBM7 123 aa4.81□□□□□ -1.64
NUDCD3-208ENST00000480209 Q75L30 129 aa4.8□□□□□ -1.64
NUDCD3-208ENST00000480209 MRPL34Q9BQ48 92 aaKnown RBP4.8□□□□□ -1.64
NUDCD3-208ENST00000480209 Q8N9P0 234 aaPredicted RBP4.79□□□□□ -1.64
NUDCD3-208ENST00000480209 RNF213Q63HN8 5207 aa4.78□□□□□ -1.64
NUDCD3-208ENST00000480209 PCOTHQ58A44 107 aa4.75□□□□□ -1.65
NUDCD3-208ENST00000480209 IMUPQ9GZP8 106 aa4.75□□□□□ -1.65
NUDCD3-208ENST00000480209 NDUFS5O43920 106 aa4.74□□□□□ -1.65
NUDCD3-208ENST00000480209 KRTAP4-1Q9BYQ7 146 aa4.74□□□□□ -1.65
NUDCD3-208ENST00000480209 FAM236AA0A1B0GUQ0 79 aa4.72□□□□□ -1.65
NUDCD3-208ENST00000480209 FAM236BA0A1B0GV22 79 aa4.72□□□□□ -1.65
NUDCD3-208ENST00000480209 Q5W150 140 aa4.72□□□□□ -1.65
NUDCD3-208ENST00000480209 ZCCHC13Q8WW36 166 aaKnown RBP4.72□□□□□ -1.65
NUDCD3-208ENST00000480209 MUC2Q02817 5179 aa4.72□□□□□ -1.65
NUDCD3-208ENST00000480209 SEC61BP60468 96 aaKnown RBP4.71□□□□□ -1.66
NUDCD3-208ENST00000480209 OCR1Q9BZK8 76 aa4.7□□□□□ -1.66
NUDCD3-208ENST00000480209 ATP11AUNQ6ZP68 121 aa4.69□□□□□ -1.66
NUDCD3-208ENST00000480209 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
NUDCD3-208ENST00000480209 TP53AIP1Q9HCN2 124 aa4.66□□□□□ -1.66
NUDCD3-208ENST00000480209 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
NUDCD3-208ENST00000480209 TRAV22A0A0B4J277 110 aa4.64□□□□□ -1.67
NUDCD3-208ENST00000480209 ATOX1O00244 68 aa4.63□□□□□ -1.67
NUDCD3-208ENST00000480209 UQCRQO14949 82 aa4.63□□□□□ -1.67
NUDCD3-208ENST00000480209 SCGB1A1P11684 91 aa4.63□□□□□ -1.67
NUDCD3-208ENST00000480209 H0Y9P7 68 aa4.62□□□□□ -1.67
NUDCD3-208ENST00000480209 IGKV2D-30A0A075B6S6 120 aa4.61□□□□□ -1.67
NUDCD3-208ENST00000480209 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
NUDCD3-208ENST00000480209 IGKV2-30P06310 120 aa4.61□□□□□ -1.67
NUDCD3-208ENST00000480209 SPINK7P58062 85 aa4.61□□□□□ -1.67
NUDCD3-208ENST00000480209 TRAV7A0A075B6U4 112 aa4.6□□□□□ -1.67
NUDCD3-208ENST00000480209 HRES1P13985 223 aa4.6□□□□□ -1.67
NUDCD3-208ENST00000480209 KRTAP19-2Q3LHN2 52 aa4.6□□□□□ -1.67
NUDCD3-208ENST00000480209 C7orf65Q6ZTY9 151 aa4.58□□□□□ -1.68
NUDCD3-208ENST00000480209 KRTAP3-1Q9BYR8 98 aa4.58□□□□□ -1.68
NUDCD3-208ENST00000480209 SMIM20Q8N5G0 67 aa4.57□□□□□ -1.68
NUDCD3-208ENST00000480209 MPLKIPQ8TAP9 179 aa4.57□□□□□ -1.68
NUDCD3-208ENST00000480209 LINC00208Q96KT6 92 aa4.57□□□□□ -1.68
NUDCD3-208ENST00000480209 C5orf47Q569G3 176 aa4.56□□□□□ -1.68
NUDCD3-208ENST00000480209 SERP2Q8N6R1 65 aa4.56□□□□□ -1.68
NUDCD3-208ENST00000480209 C1orf64Q8NEQ6 169 aa4.56□□□□□ -1.68
NUDCD3-208ENST00000480209 CYP4F30PQ9H0H9 118 aa4.56□□□□□ -1.68
NUDCD3-208ENST00000480209 LOC101927531A0A1B0GV80 90 aa4.55□□□□□ -1.68
NUDCD3-208ENST00000480209 MP68P56378 58 aa4.55□□□□□ -1.68
NUDCD3-208ENST00000480209 KLKP1Q107X0 134 aa4.55□□□□□ -1.68
NUDCD3-208ENST00000480209 A0A0U1RQV1 116 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 205.1 ms