RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 SS18L2Q9UHA2 77 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 AHNAK2Q8IVF2 5795 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 A0A087WSZ3 146 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 A0A087WVE0 104 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 LOC110117498A0A087WWA1 95 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 A8MWP4 228 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 CHKB-CPT1BH3BT56 60 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 ERC2-IT1O76042 136 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 CRYGAP11844 174 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 CNBPP62633 177 aaKnown RBP0.69□□□□□ -2.3
SRRM1-211ENST00000478890 CASC2Q6XLA1 102 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 Q6ZQT0 140 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 ADM2Q7Z4H4 148 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 C20orf197Q8N268 126 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 SERP2Q8N6R1 65 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 C9orf163Q8N9P6 203 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 C1orf64Q8NEQ6 169 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 KCNQ1DNQ9H478 68 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 LINC00846Q9NV44 126 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 PSORS1C2Q9UIG4 136 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 SNURFQ9Y675 71 aa0.69□□□□□ -2.3
SRRM1-211ENST00000478890 SPTBN5Q9NRC6 3674 aaKnown RBP0.69□□□□□ -2.3
SRRM1-211ENST00000478890 TRAV7A0A075B6U4 112 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 H0Y9P7 68 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 CCDC179H3BU77 68 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 J3KT08 172 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 KRTAP12-4P60329 112 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 TMEM258P61165 79 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 KRTAP25-1Q3LHN0 102 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 PCOTHQ58A44 107 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 C1orf195Q5TG92 126 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 KRTAP26-1Q6PEX3 210 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 Q8NDZ9 215 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 LINC00208Q96KT6 92 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 Q96NJ1 140 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 LIMD2Q9BT23 127 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 IMUPQ9GZP8 106 aa0.68□□□□□ -2.3
SRRM1-211ENST00000478890 DMBT1Q9UGM3 2413 aaPredicted RBP0.67□□□□□ -2.3
SRRM1-211ENST00000478890 TRBV7-4A0A0J9YYF1 115 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 TRBV7-7A0A0K0K1E9 115 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 LCE6AA0A183 80 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 hDV103S1A0JD37 113 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 C9orf92A6NGG3 77 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 HCG22E2RYF7 251 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 UQCRQO14949 82 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 NDUFC1O43677 76 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 SPINK1P00995 79 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 HRES1P13985 223 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 COX7CP15954 63 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 LINC00313P59037 77 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 Q6Q795 121 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 SSBP3-AS1Q7Z2R9 100 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 LINC00304Q8N9R0 145 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 OBSCN-AS1Q96MR7 158 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 SPRR4Q96PI1 79 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 PLAC8Q9NZF1 115 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 R4GN34 69 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 MYO15AQ9UKN7 3530 aa0.67□□□□□ -2.3
SRRM1-211ENST00000478890 FAM236DA0A1B0GTK5 79 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 A0A1B0GW54 56 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 A0A1W2PNM2 257 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 K7EQZ3 153 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 FAM236CP0DP71 79 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 KRTAP13-2Q52LG2 175 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 SPAG11AQ6PDA7 123 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 ATP11AUNQ6ZP68 121 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 C7orf65Q6ZTY9 151 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 PRR15Q8IV56 129 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 SPTSSBQ8NFR3 76 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 TMEM254Q8TBM7 123 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 TP53AIP1Q9HCN2 124 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 SERP1Q9Y6X1 66 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 MUC3AQ02505 3323 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 ASPMQ8IZT6 3477 aa0.66□□□□□ -2.3
SRRM1-211ENST00000478890 WDFY3Q8IZQ1 3526 aa0.65□□□□□ -2.3
SRRM1-211ENST00000478890 IGLV5-48A0A075B6I7 105 aa0.65□□□□□ -2.31
SRRM1-211ENST00000478890 TRAV22A0A0B4J277 110 aa0.65□□□□□ -2.31
SRRM1-211ENST00000478890 ACYP2P14621 99 aa0.65□□□□□ -2.31
SRRM1-211ENST00000478890 ATP5EP56381 51 aaPredicted RBP0.65□□□□□ -2.31
SRRM1-211ENST00000478890 KRTAP21-3Q3LHN1 58 aa0.65□□□□□ -2.31
SRRM1-211ENST00000478890 FAM229BQ4G0N7 80 aa0.65□□□□□ -2.31
SRRM1-211ENST00000478890 Q5VSD8 79 aa0.65□□□□□ -2.31
SRRM1-211ENST00000478890 COX6B2Q6YFQ2 88 aa0.65□□□□□ -2.31
SRRM1-211ENST00000478890 Q6ZRN7 208 aaPredicted RBP0.65□□□□□ -2.31
SRRM1-211ENST00000478890 BRK1Q8WUW1 75 aa0.65□□□□□ -2.31
SRRM1-211ENST00000478890 PRR15LQ9BU68 103 aa0.65□□□□□ -2.31
SRRM1-211ENST00000478890 FLG2Q5D862 2391 aaPredicted RBP0.65□□□□□ -2.31
SRRM1-211ENST00000478890 RELNP78509 3460 aa0.64□□□□□ -2.31
SRRM1-211ENST00000478890 LAMA5O15230 3695 aa0.64□□□□□ -2.31
SRRM1-211ENST00000478890 A0A1B0GU33 70 aa0.64□□□□□ -2.31
SRRM1-211ENST00000478890 LOC101927531A0A1B0GV80 90 aa0.64□□□□□ -2.31
SRRM1-211ENST00000478890 H3BPC8 53 aa0.64□□□□□ -2.31
SRRM1-211ENST00000478890 SPRR1AP35321 89 aa0.64□□□□□ -2.31
SRRM1-211ENST00000478890 LINC01600Q96MT4 127 aa0.64□□□□□ -2.31
SRRM1-211ENST00000478890 MRPL34Q9BQ48 92 aaKnown RBP0.64□□□□□ -2.31
SRRM1-211ENST00000478890 CSMD2Q7Z408 3487 aa0.64□□□□□ -2.31
SRRM1-211ENST00000478890 ZFHX4Q86UP3 3567 aa0.63□□□□□ -2.31
SRRM1-211ENST00000478890 MMP24-AS1A0A0U1RRL7 71 aa0.63□□□□□ -2.31
SRRM1-211ENST00000478890 A0A1B0GU69 56 aa0.63□□□□□ -2.31
SRRM1-211ENST00000478890 P0C880 135 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms