RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 SPINK6Q6UWN8 80 aa0.3□□□□□ -2.36
TARDBP-208ENST00000477447 SACSQ9NZJ4 4579 aa0.3□□□□□ -2.36
TARDBP-208ENST00000477447 DOPEY2Q9Y3R5 2298 aa0.3□□□□□ -2.36
TARDBP-208ENST00000477447 LYSTQ99698 3801 aa0.3□□□□□ -2.36
TARDBP-208ENST00000477447 FRAS1Q86XX4 4008 aa0.29□□□□□ -2.36
TARDBP-208ENST00000477447 NF1P21359 2839 aa0.29□□□□□ -2.36
TARDBP-208ENST00000477447 CACNA1AO00555 2505 aa0.29□□□□□ -2.36
TARDBP-208ENST00000477447 TACC2O95359 2948 aa0.29□□□□□ -2.36
TARDBP-208ENST00000477447 HIVEP1P15822 2718 aa0.29□□□□□ -2.36
TARDBP-208ENST00000477447 M0QZ58 72 aa0.29□□□□□ -2.36
TARDBP-208ENST00000477447 SRRM2Q9UQ35 2752 aaKnown RBP0.29□□□□□ -2.36
TARDBP-208ENST00000477447 EP300Q09472 2414 aaPredicted RBP0.29□□□□□ -2.36
TARDBP-208ENST00000477447 BSNQ9UPA5 3926 aa0.29□□□□□ -2.36
TARDBP-208ENST00000477447 RANBP2P49792 3224 aaKnown RBP0.29□□□□□ -2.36
TARDBP-208ENST00000477447 PKD1L2Q7Z442 2459 aa0.29□□□□□ -2.36
TARDBP-208ENST00000477447 DNAH8Q96JB1 4490 aa0.29□□□□□ -2.36
TARDBP-208ENST00000477447 APOBP04114 4563 aaKnown RBP0.29□□□□□ -2.36
TARDBP-208ENST00000477447 UNC79Q9P2D8 2635 aa0.29□□□□□ -2.36
TARDBP-208ENST00000477447 KNL1Q8NG31 2342 aa0.29□□□□□ -2.36
TARDBP-208ENST00000477447 CUBNO60494 3623 aa0.28□□□□□ -2.36
TARDBP-208ENST00000477447 CEP290O15078 2479 aa0.28□□□□□ -2.36
TARDBP-208ENST00000477447 ZFYVE26Q68DK2 2539 aa0.28□□□□□ -2.36
TARDBP-208ENST00000477447 HUWE1Q7Z6Z7 4374 aaKnown RBP0.28□□□□□ -2.36
TARDBP-208ENST00000477447 SPENQ96T58 3664 aaKnown RBP0.28□□□□□ -2.36
TARDBP-208ENST00000477447 UTP20O75691 2785 aaKnown RBP0.28□□□□□ -2.36
TARDBP-208ENST00000477447 H3BSH0 61 aa0.28□□□□□ -2.36
TARDBP-208ENST00000477447 TOMM7Q9P0U1 55 aa0.28□□□□□ -2.36
TARDBP-208ENST00000477447 AKAP6Q13023 2319 aa0.28□□□□□ -2.36
TARDBP-208ENST00000477447 WDR87Q6ZQQ6 2873 aa0.28□□□□□ -2.36
TARDBP-208ENST00000477447 DNAH3Q8TD57 4116 aa0.28□□□□□ -2.36
TARDBP-208ENST00000477447 PKD1P98161 4303 aa0.28□□□□□ -2.37
TARDBP-208ENST00000477447 USP24Q9UPU5 2620 aa0.28□□□□□ -2.37
TARDBP-208ENST00000477447 GCN1Q92616 2671 aaKnown RBP0.28□□□□□ -2.37
TARDBP-208ENST00000477447 HSPG2P98160 4391 aa0.27□□□□□ -2.37
TARDBP-208ENST00000477447 DNAH9Q9NYC9 4486 aa0.27□□□□□ -2.37
TARDBP-208ENST00000477447 NBPF19A0A087WUL8 3843 aa0.27□□□□□ -2.37
TARDBP-208ENST00000477447 USP9YO00507 2555 aaPredicted RBP0.27□□□□□ -2.37
TARDBP-208ENST00000477447 EPG5Q9HCE0 2579 aa0.27□□□□□ -2.37
TARDBP-208ENST00000477447 CHD8Q9HCK8 2581 aa0.27□□□□□ -2.37
TARDBP-208ENST00000477447 STAB1Q9NY15 2570 aa0.27□□□□□ -2.37
TARDBP-208ENST00000477447 TENM2Q9NT68 2774 aa0.27□□□□□ -2.37
TARDBP-208ENST00000477447 H0YGG7 62 aa0.27□□□□□ -2.37
TARDBP-208ENST00000477447 HECTD4Q9Y4D8 3996 aa0.27□□□□□ -2.37
TARDBP-208ENST00000477447 LPAP08519 4548 aa0.27□□□□□ -2.37
TARDBP-208ENST00000477447 FLNBO75369 2602 aaKnown RBP0.27□□□□□ -2.37
TARDBP-208ENST00000477447 ANKRD11Q6UB99 2663 aaPredicted RBP0.27□□□□□ -2.37
TARDBP-208ENST00000477447 CELSR1Q9NYQ6 3014 aa0.27□□□□□ -2.37
TARDBP-208ENST00000477447 PKDREJQ9NTG1 2253 aa0.26□□□□□ -2.37
TARDBP-208ENST00000477447 PDE4DIPQ5VU43 2346 aa0.26□□□□□ -2.37
TARDBP-208ENST00000477447 KMT2DO14686 5537 aa0.26□□□□□ -2.37
TARDBP-208ENST00000477447 NCOR1O75376 2440 aa0.26□□□□□ -2.37
TARDBP-208ENST00000477447 HIVEP3Q5T1R4 2406 aa0.26□□□□□ -2.37
TARDBP-208ENST00000477447 ANK3Q12955 4377 aaKnown RBP0.26□□□□□ -2.37
TARDBP-208ENST00000477447 VPS13DQ5THJ4 4388 aa0.26□□□□□ -2.37
TARDBP-208ENST00000477447 CHD7Q9P2D1 2997 aa0.26□□□□□ -2.37
TARDBP-208ENST00000477447 K7EIM0 57 aa0.26□□□□□ -2.37
TARDBP-208ENST00000477447 DEFB104AQ8WTQ1 72 aa0.26□□□□□ -2.37
TARDBP-208ENST00000477447 U3KQA8 63 aa0.26□□□□□ -2.37
TARDBP-208ENST00000477447 SPTA1P02549 2419 aa0.26□□□□□ -2.37
TARDBP-208ENST00000477447 PTPN13Q12923 2485 aa0.26□□□□□ -2.37
TARDBP-208ENST00000477447 PKD1L1Q8TDX9 2849 aa0.26□□□□□ -2.37
TARDBP-208ENST00000477447 DMXL1Q9Y485 3027 aa0.25□□□□□ -2.37
TARDBP-208ENST00000477447 TEP1Q99973 2627 aaKnown RBP0.25□□□□□ -2.37
TARDBP-208ENST00000477447 NBASA2RRP1 2371 aa0.25□□□□□ -2.37
TARDBP-208ENST00000477447 DNAH2Q9P225 4427 aa0.25□□□□□ -2.37
TARDBP-208ENST00000477447 C9orf92A6NGG3 77 aa0.25□□□□□ -2.37
TARDBP-208ENST00000477447 TNP1P09430 55 aa0.25□□□□□ -2.37
TARDBP-208ENST00000477447 ZANQ9Y493 2812 aa0.25□□□□□ -2.37
TARDBP-208ENST00000477447 FAT3Q8TDW7 4589 aa0.25□□□□□ -2.37
TARDBP-208ENST00000477447 ITPR3Q14573 2671 aa0.25□□□□□ -2.37
TARDBP-208ENST00000477447 RELNP78509 3460 aa0.25□□□□□ -2.37
TARDBP-208ENST00000477447 PKHD1P08F94 4074 aa0.24□□□□□ -2.37
TARDBP-208ENST00000477447 ZFHX4Q86UP3 3567 aa0.24□□□□□ -2.37
TARDBP-208ENST00000477447 NCOR2Q9Y618 2525 aa0.24□□□□□ -2.37
TARDBP-208ENST00000477447 WNK1Q9H4A3 2382 aa0.24□□□□□ -2.37
TARDBP-208ENST00000477447 COL12A1Q99715 3063 aa0.24□□□□□ -2.37
TARDBP-208ENST00000477447 KALRNO60229 2985 aa0.24□□□□□ -2.37
TARDBP-208ENST00000477447 SPRR2DP22532 72 aa0.24□□□□□ -2.37
TARDBP-208ENST00000477447 KRTAP8-1Q8IUC2 63 aa0.24□□□□□ -2.37
TARDBP-208ENST00000477447 TMEM167AQ8TBQ9 72 aa0.24□□□□□ -2.37
TARDBP-208ENST00000477447 LRP1Q07954 4544 aaKnown RBP0.24□□□□□ -2.37
TARDBP-208ENST00000477447 DYNC2H1Q8NCM8 4307 aaKnown RBP0.24□□□□□ -2.37
TARDBP-208ENST00000477447 CCDC168Q8NDH2 2452 aa0.24□□□□□ -2.37
TARDBP-208ENST00000477447 CSPG4Q6UVK1 2322 aa0.24□□□□□ -2.37
TARDBP-208ENST00000477447 SVEP1Q4LDE5 3571 aa0.24□□□□□ -2.37
TARDBP-208ENST00000477447 CSMD1Q96PZ7 3565 aa0.24□□□□□ -2.37
TARDBP-208ENST00000477447 SPTBN5Q9NRC6 3674 aaKnown RBP0.23□□□□□ -2.37
TARDBP-208ENST00000477447 ZZEF1O43149 2961 aa0.23□□□□□ -2.37
TARDBP-208ENST00000477447 DMBT1Q9UGM3 2413 aaPredicted RBP0.23□□□□□ -2.37
TARDBP-208ENST00000477447 H3BNG1 76 aa0.23□□□□□ -2.37
TARDBP-208ENST00000477447 NBEAL2Q6ZNJ1 2754 aa0.23□□□□□ -2.37
TARDBP-208ENST00000477447 ANKHD1Q8IWZ3 2542 aaKnown RBP0.23□□□□□ -2.37
TARDBP-208ENST00000477447 HRNRQ86YZ3 2850 aaPredicted RBP0.23□□□□□ -2.37
TARDBP-208ENST00000477447 DNAH6Q9C0G6 4158 aa0.23□□□□□ -2.37
TARDBP-208ENST00000477447 NIPBLQ6KC79 2804 aaeCLIP0.23□□□□□ -2.37
TARDBP-208ENST00000477447 SMG1Q96Q15 3661 aaKnown RBP0.23□□□□□ -2.37
TARDBP-208ENST00000477447 APC2O95996 2303 aa0.22□□□□□ -2.37
TARDBP-208ENST00000477447 ITPR1Q14643 2758 aa0.22□□□□□ -2.37
TARDBP-208ENST00000477447 SPRR2BP35325 72 aa0.22□□□□□ -2.37
TARDBP-208ENST00000477447 TRIOO75962 3097 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms