RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 IFI27P40305 119 aaPredicted RBP1.44□□□□□ -2.18
HMGN4-202ENST00000477243 GNGT1P63211 74 aa1.44□□□□□ -2.18
HMGN4-202ENST00000477243 DEFB112Q30KQ8 113 aa1.44□□□□□ -2.18
HMGN4-202ENST00000477243 KRTAP4-9Q9BYQ8 210 aa1.44□□□□□ -2.18
HMGN4-202ENST00000477243 PROK2Q9HC23 129 aa1.44□□□□□ -2.18
HMGN4-202ENST00000477243 A0A087WVE0 104 aa1.43□□□□□ -2.18
HMGN4-202ENST00000477243 H0YGG7 62 aa1.43□□□□□ -2.18
HMGN4-202ENST00000477243 J3QRE1 110 aa1.43□□□□□ -2.18
HMGN4-202ENST00000477243 ZNF137PP52743 207 aa1.43□□□□□ -2.18
HMGN4-202ENST00000477243 C10orf99Q6UWK7 81 aa1.43□□□□□ -2.18
HMGN4-202ENST00000477243 LINC00208Q96KT6 92 aa1.43□□□□□ -2.18
HMGN4-202ENST00000477243 KRTAP4-8Q9BYQ9 185 aa1.43□□□□□ -2.18
HMGN4-202ENST00000477243 VPS13BQ7Z7G8 4022 aa1.43□□□□□ -2.18
HMGN4-202ENST00000477243 DNAH3Q8TD57 4116 aa1.42□□□□□ -2.18
HMGN4-202ENST00000477243 VPS13DQ5THJ4 4388 aa1.42□□□□□ -2.18
HMGN4-202ENST00000477243 SORL1Q92673 2214 aa1.42□□□□□ -2.18
HMGN4-202ENST00000477243 H0Y9P7 68 aa1.42□□□□□ -2.18
HMGN4-202ENST00000477243 M0R3E3 92 aa1.42□□□□□ -2.18
HMGN4-202ENST00000477243 NDUFB1O75438 58 aa1.42□□□□□ -2.18
HMGN4-202ENST00000477243 IGKV4-1P06312 121 aa1.42□□□□□ -2.18
HMGN4-202ENST00000477243 ACYP2P14621 99 aa1.42□□□□□ -2.18
HMGN4-202ENST00000477243 UNQ6190/PRO20217Q6UXQ8 127 aa1.42□□□□□ -2.18
HMGN4-202ENST00000477243 BRD3OSQ6XYD6 125 aa1.42□□□□□ -2.18
HMGN4-202ENST00000477243 DEFB108BQ8NET1 73 aa1.42□□□□□ -2.18
HMGN4-202ENST00000477243 TRGV1A0A0A0MS02 117 aa1.41□□□□□ -2.18
HMGN4-202ENST00000477243 TRBV7-4A0A0J9YYF1 115 aa1.41□□□□□ -2.18
HMGN4-202ENST00000477243 LOC100996750A0A140TA64 210 aa1.41□□□□□ -2.18
HMGN4-202ENST00000477243 A0A1B0GUT8 65 aa1.41□□□□□ -2.18
HMGN4-202ENST00000477243 LCE3BQ5TA77 95 aa1.41□□□□□ -2.18
HMGN4-202ENST00000477243 LINC00575Q6W349 94 aa1.41□□□□□ -2.18
HMGN4-202ENST00000477243 Q96NJ1 140 aa1.41□□□□□ -2.18
HMGN4-202ENST00000477243 SPRR4Q96PI1 79 aa1.41□□□□□ -2.18
HMGN4-202ENST00000477243 KRTAP4-6Q9BYQ5 205 aa1.41□□□□□ -2.18
HMGN4-202ENST00000477243 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.4□□□□□ -2.19
HMGN4-202ENST00000477243 TMEM263Q8WUH6 116 aaKnown RBP1.4□□□□□ -2.19
HMGN4-202ENST00000477243 OBSCN-AS1Q96MR7 158 aa1.4□□□□□ -2.19
HMGN4-202ENST00000477243 GNG13Q9P2W3 67 aa1.4□□□□□ -2.19
HMGN4-202ENST00000477243 TRBV30A0A0K0K1B3 111 aa1.39□□□□□ -2.19
HMGN4-202ENST00000477243 H3BVH4 76 aa1.39□□□□□ -2.19
HMGN4-202ENST00000477243 ATXN8Q156A1 80 aa1.39□□□□□ -2.19
HMGN4-202ENST00000477243 Q5VSD8 79 aa1.39□□□□□ -2.19
HMGN4-202ENST00000477243 SMIM11BQ8TCY0 68 aa1.39□□□□□ -2.19
HMGN4-202ENST00000477243 PLAC8Q9NZF1 115 aa1.39□□□□□ -2.19
HMGN4-202ENST00000477243 C3orf79P0CE67 100 aa1.38□□□□□ -2.19
HMGN4-202ENST00000477243 SPINK13Q1W4C9 94 aa1.38□□□□□ -2.19
HMGN4-202ENST00000477243 DEFB107AQ8IZN7 70 aa1.38□□□□□ -2.19
HMGN4-202ENST00000477243 HILPDAQ9Y5L2 63 aa1.38□□□□□ -2.19
HMGN4-202ENST00000477243 TRBV6-1A0A0K0K1D8 114 aa1.37□□□□□ -2.19
HMGN4-202ENST00000477243 SMR3BP02814 79 aaPredicted RBP1.37□□□□□ -2.19
HMGN4-202ENST00000477243 KRTAP10-12P60413 245 aa1.37□□□□□ -2.19
HMGN4-202ENST00000477243 SPATA8Q6RVD6 105 aa1.37□□□□□ -2.19
HMGN4-202ENST00000477243 NCR3O14931 201 aa1.36□□□□□ -2.19
HMGN4-202ENST00000477243 KRTAP5-9P26371 169 aa1.36□□□□□ -2.19
HMGN4-202ENST00000477243 KRTAP19-6Q3LI70 58 aa1.36□□□□□ -2.19
HMGN4-202ENST00000477243 C10orf113Q5VZT2 155 aa1.36□□□□□ -2.19
HMGN4-202ENST00000477243 LINC00472Q9H8W2 130 aa1.36□□□□□ -2.19
HMGN4-202ENST00000477243 KRTAP12-2P59991 146 aa1.35□□□□□ -2.19
HMGN4-202ENST00000477243 KRTAP10-8P60410 259 aa1.35□□□□□ -2.19
HMGN4-202ENST00000477243 PLAC4Q8WY50 150 aa1.35□□□□□ -2.19
HMGN4-202ENST00000477243 DNAH2Q9P225 4427 aa1.34□□□□□ -2.19
HMGN4-202ENST00000477243 FXYD6-FXYD2A0A087WZ82 144 aa1.34□□□□□ -2.19
HMGN4-202ENST00000477243 KRTAP13-4Q3LI77 160 aa1.34□□□□□ -2.19
HMGN4-202ENST00000477243 Q6ZRX8 168 aa1.34□□□□□ -2.19
HMGN4-202ENST00000477243 KRTAP9-8Q9BYQ0 159 aa1.34□□□□□ -2.19
HMGN4-202ENST00000477243 TNCP24821 2201 aa1.34□□□□□ -2.2
HMGN4-202ENST00000477243 CCL22O00626 93 aa1.33□□□□□ -2.2
HMGN4-202ENST00000477243 S100A3P33764 101 aa1.33□□□□□ -2.2
HMGN4-202ENST00000477243 SPINK7P58062 85 aa1.33□□□□□ -2.2
HMGN4-202ENST00000477243 NREPQ16612 68 aa1.33□□□□□ -2.2
HMGN4-202ENST00000477243 LCE3CQ5T5A8 94 aa1.33□□□□□ -2.2
HMGN4-202ENST00000477243 LCE1DQ5T752 114 aa1.33□□□□□ -2.2
HMGN4-202ENST00000477243 TNXBP22105 4242 aa1.33□□□□□ -2.2
HMGN4-202ENST00000477243 GVQW2A0A096LPI5 108 aaPredicted RBP1.32□□□□□ -2.2
HMGN4-202ENST00000477243 TRAV21A0A0B4J279 112 aa1.32□□□□□ -2.2
HMGN4-202ENST00000477243 A0A1B0GU69 56 aa1.32□□□□□ -2.2
HMGN4-202ENST00000477243 H3BUX3 64 aa1.32□□□□□ -2.2
HMGN4-202ENST00000477243 IFI6P09912 130 aa1.32□□□□□ -2.2
HMGN4-202ENST00000477243 FXYD6P3P58550 94 aa1.32□□□□□ -2.2
HMGN4-202ENST00000477243 RPL37P61927 97 aaKnown RBP1.32□□□□□ -2.2
HMGN4-202ENST00000477243 DEFB104AQ8WTQ1 72 aa1.32□□□□□ -2.2
HMGN4-202ENST00000477243 DNAH17Q9UFH2 4485 aa1.32□□□□□ -2.2
HMGN4-202ENST00000477243 G3V318 75 aa1.31□□□□□ -2.2
HMGN4-202ENST00000477243 H3BSH0 61 aa1.31□□□□□ -2.2
HMGN4-202ENST00000477243 KRTAP10-1P60331 282 aa1.31□□□□□ -2.2
HMGN4-202ENST00000477243 RPL38P63173 70 aaKnown RBP1.31□□□□□ -2.2
HMGN4-202ENST00000477243 HAMPP81172 84 aa1.31□□□□□ -2.2
HMGN4-202ENST00000477243 PRB3Q04118 309 aaPredicted RBP1.31□□□□□ -2.2
HMGN4-202ENST00000477243 KRTAP13-3Q3SY46 172 aa1.31□□□□□ -2.2
HMGN4-202ENST00000477243 GAFA1Q96PS6 74 aa1.31□□□□□ -2.2
HMGN4-202ENST00000477243 KRTAP4-4Q9BYR3 166 aa1.31□□□□□ -2.2
HMGN4-202ENST00000477243 SNRPGP15A8MWD9 76 aa1.3□□□□□ -2.2
HMGN4-202ENST00000477243 PCOTHQ58A44 107 aa1.3□□□□□ -2.2
HMGN4-202ENST00000477243 FAM103A1Q9BTL3 118 aaKnown RBP1.3□□□□□ -2.2
HMGN4-202ENST00000477243 APLNQ9ULZ1 77 aa1.3□□□□□ -2.2
HMGN4-202ENST00000477243 LPAP08519 4548 aa1.3□□□□□ -2.2
HMGN4-202ENST00000477243 MRPL33O75394 65 aaKnown RBP1.29□□□□□ -2.2
HMGN4-202ENST00000477243 SPRR2EP22531 72 aa1.29□□□□□ -2.2
HMGN4-202ENST00000477243 SPRR2BP35325 72 aa1.29□□□□□ -2.2
HMGN4-202ENST00000477243 SPRR2AP35326 72 aa1.29□□□□□ -2.2
HMGN4-202ENST00000477243 KRTAP10-6P60371 365 aaPredicted RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms