RNA–Protein interactions for RNA: ENST00000476408.1

CD53-204, Transcript of CD53 molecule, humanhuman

TSL 5

Gene CD53, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-204ENST00000476408 DNAH3Q8TD57 4116 aa4.22□□□□□ -1.73
CD53-204ENST00000476408 A6NED7 52 aa4.21□□□□□ -1.74
CD53-204ENST00000476408 ZNF706Q9Y5V0 76 aaPredicted RBP4.21□□□□□ -1.74
CD53-204ENST00000476408 A0A096LNI7 61 aa4.2□□□□□ -1.74
CD53-204ENST00000476408 IGKV2-24A0A0C4DH68 120 aa4.2□□□□□ -1.74
CD53-204ENST00000476408 Q96NJ1 140 aa4.2□□□□□ -1.74
CD53-204ENST00000476408 C8orf17Q9NRJ1 99 aa4.2□□□□□ -1.74
CD53-204ENST00000476408 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
CD53-204ENST00000476408 PRR4Q16378 134 aa4.19□□□□□ -1.74
CD53-204ENST00000476408 A0A1B0GVX0 72 aa4.18□□□□□ -1.74
CD53-204ENST00000476408 A0A1W2PNN7 141 aa4.18□□□□□ -1.74
CD53-204ENST00000476408 PLA2G1BP04054 148 aaKnown RBP4.18□□□□□ -1.74
CD53-204ENST00000476408 PRLHP81277 87 aa4.18□□□□□ -1.74
CD53-204ENST00000476408 RBM12B-AS1Q9P1G2 102 aa4.18□□□□□ -1.74
CD53-204ENST00000476408 PRR26Q8N8Z3 221 aa4.17□□□□□ -1.74
CD53-204ENST00000476408 MRPL34Q9BQ48 92 aaKnown RBP4.17□□□□□ -1.74
CD53-204ENST00000476408 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
CD53-204ENST00000476408 RETNQ9HD89 108 aa4.17□□□□□ -1.74
CD53-204ENST00000476408 LYSTQ99698 3801 aa4.17□□□□□ -1.74
CD53-204ENST00000476408 C8orf87E5RJ46 101 aa4.16□□□□□ -1.74
CD53-204ENST00000476408 HRES1P13985 223 aa4.15□□□□□ -1.75
CD53-204ENST00000476408 DEFB116Q30KQ4 102 aa4.15□□□□□ -1.75
CD53-204ENST00000476408 CSMD3Q7Z407 3707 aa4.15□□□□□ -1.75
CD53-204ENST00000476408 ACYP2P14621 99 aa4.14□□□□□ -1.75
CD53-204ENST00000476408 KRTAP13-3Q3SY46 172 aa4.14□□□□□ -1.75
CD53-204ENST00000476408 CDK2AP2O75956 126 aa4.13□□□□□ -1.75
CD53-204ENST00000476408 SPTSSBQ8NFR3 76 aa4.13□□□□□ -1.75
CD53-204ENST00000476408 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
CD53-204ENST00000476408 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
CD53-204ENST00000476408 DMAC1Q96GE9 116 aa4.12□□□□□ -1.75
CD53-204ENST00000476408 KIAA1109Q2LD37 5005 aa4.11□□□□□ -1.75
CD53-204ENST00000476408 A8MU10 97 aa4.11□□□□□ -1.75
CD53-204ENST00000476408 CHTF8P0CG12 524 aa4.11□□□□□ -1.75
CD53-204ENST00000476408 FRAS1Q86XX4 4008 aa4.11□□□□□ -1.75
CD53-204ENST00000476408 DNAH7Q8WXX0 4024 aa4.11□□□□□ -1.75
CD53-204ENST00000476408 IGHV6-1A0A0B4J1U7 121 aa4.1□□□□□ -1.75
CD53-204ENST00000476408 A0A0G2JQZ4 141 aa4.1□□□□□ -1.75
CD53-204ENST00000476408 SPAG11AQ6PDA7 123 aa4.1□□□□□ -1.75
CD53-204ENST00000476408 SPATA8Q6RVD6 105 aa4.1□□□□□ -1.75
CD53-204ENST00000476408 HUWE1Q7Z6Z7 4374 aaKnown RBP4.09□□□□□ -1.75
CD53-204ENST00000476408 PCOTHQ58A44 107 aa4.09□□□□□ -1.75
CD53-204ENST00000476408 SPACA4Q8TDM5 124 aa4.09□□□□□ -1.75
CD53-204ENST00000476408 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
CD53-204ENST00000476408 SPINK7P58062 85 aa4.08□□□□□ -1.76
CD53-204ENST00000476408 ABCA13Q86UQ4 5058 aa4.08□□□□□ -1.76
CD53-204ENST00000476408 KRTAP11-1Q8IUC1 163 aa4.08□□□□□ -1.76
CD53-204ENST00000476408 LY6G6CO95867 125 aa4.07□□□□□ -1.76
CD53-204ENST00000476408 SSBP3-AS1Q7Z2R9 100 aa4.07□□□□□ -1.76
CD53-204ENST00000476408 KRTAP19-1Q8IUB9 90 aa4.07□□□□□ -1.76
CD53-204ENST00000476408 KRTAP1-5Q9BYS1 174 aa4.07□□□□□ -1.76
CD53-204ENST00000476408 APLNQ9ULZ1 77 aa4.07□□□□□ -1.76
CD53-204ENST00000476408 UBR4Q5T4S7 5183 aa4.07□□□□□ -1.76
CD53-204ENST00000476408 IGLV5-52A0A0A0MRZ9 124 aa4.06□□□□□ -1.76
CD53-204ENST00000476408 ZNF861PO60384 105 aa4.06□□□□□ -1.76
CD53-204ENST00000476408 Q6ZRN7 208 aaPredicted RBP4.06□□□□□ -1.76
CD53-204ENST00000476408 HERC1Q15751 4861 aa4.05□□□□□ -1.76
CD53-204ENST00000476408 STARD9Q9P2P6 4700 aa4.04□□□□□ -1.76
CD53-204ENST00000476408 NBDYA0A0U1RRE5 68 aa4.04□□□□□ -1.76
CD53-204ENST00000476408 UQCR11O14957 56 aa4.04□□□□□ -1.76
CD53-204ENST00000476408 RTL8CO15255 209 aa4.04□□□□□ -1.76
CD53-204ENST00000476408 HECTD4Q9Y4D8 3996 aa4.03□□□□□ -1.76
CD53-204ENST00000476408 UBE2DNLQ8IWF7 75 aa4.03□□□□□ -1.76
CD53-204ENST00000476408 IGLV9-49A0A0B4J1Y8 123 aa4.02□□□□□ -1.77
CD53-204ENST00000476408 A0A1B0GU69 56 aa4.02□□□□□ -1.77
CD53-204ENST00000476408 NUPR2A6NF83 97 aa4.02□□□□□ -1.77
CD53-204ENST00000476408 IGKV2-30P06310 120 aa4.02□□□□□ -1.77
CD53-204ENST00000476408 LINC00313P59037 77 aa4.02□□□□□ -1.77
CD53-204ENST00000476408 LINC01554Q52M75 96 aa4□□□□□ -1.77
CD53-204ENST00000476408 Q5W150 140 aa4□□□□□ -1.77
CD53-204ENST00000476408 RETNLBQ9BQ08 111 aa4□□□□□ -1.77
CD53-204ENST00000476408 PLECQ15149 4684 aaKnown RBP3.99□□□□□ -1.77
CD53-204ENST00000476408 MIR22HGQ0VDD5 57 aa3.99□□□□□ -1.77
CD53-204ENST00000476408 ALMS1Q8TCU4 4167 aa3.98□□□□□ -1.77
CD53-204ENST00000476408 SEC61BP60468 96 aaKnown RBP3.98□□□□□ -1.77
CD53-204ENST00000476408 PSORS1C2Q9UIG4 136 aa3.98□□□□□ -1.77
CD53-204ENST00000476408 A0A087WTM6 91 aa3.97□□□□□ -1.77
CD53-204ENST00000476408 NOTCH2NLQ7Z3S9 236 aa3.97□□□□□ -1.77
CD53-204ENST00000476408 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.97□□□□□ -1.77
CD53-204ENST00000476408 IGKV2D-30A0A075B6S6 120 aa3.96□□□□□ -1.78
CD53-204ENST00000476408 PANO1I0J062 215 aa3.96□□□□□ -1.78
CD53-204ENST00000476408 IGLV7-43P04211 117 aa3.96□□□□□ -1.78
CD53-204ENST00000476408 KRTAP4-7Q9BYR0 210 aa3.95□□□□□ -1.78
CD53-204ENST00000476408 KRTAP16-1A8MUX0 517 aa3.94□□□□□ -1.78
CD53-204ENST00000476408 DNAH10Q8IVF4 4471 aa3.93□□□□□ -1.78
CD53-204ENST00000476408 PKHD1P08F94 4074 aa3.93□□□□□ -1.78
CD53-204ENST00000476408 A0A1B0GVY2 172 aa3.93□□□□□ -1.78
CD53-204ENST00000476408 RPS29P62273 56 aaKnown RBP3.93□□□□□ -1.78
CD53-204ENST00000476408 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
CD53-204ENST00000476408 DMBT1Q9UGM3 2413 aaPredicted RBP3.93□□□□□ -1.78
CD53-204ENST00000476408 KMT2AQ03164 3969 aa3.93□□□□□ -1.78
CD53-204ENST00000476408 KRTAP4-5Q9BYR2 181 aa3.92□□□□□ -1.78
CD53-204ENST00000476408 SPINK6Q6UWN8 80 aa3.88□□□□□ -1.79
CD53-204ENST00000476408 CIRBP-AS1Q8TBR5 109 aa3.88□□□□□ -1.79
CD53-204ENST00000476408 SRRM2Q9UQ35 2752 aaKnown RBP3.87□□□□□ -1.79
CD53-204ENST00000476408 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
CD53-204ENST00000476408 ANAPC11Q9NYG5 84 aa3.87□□□□□ -1.79
CD53-204ENST00000476408 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
CD53-204ENST00000476408 SPINK1P00995 79 aa3.85□□□□□ -1.79
CD53-204ENST00000476408 HSPG2P98160 4391 aa3.85□□□□□ -1.79
CD53-204ENST00000476408 A8MUU9 505 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms