RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 H3BPC8 53 aa3.59□□□□□ -1.83
ATPAF1-204ENST00000474020 LINC00483Q53H64 154 aa3.59□□□□□ -1.83
ATPAF1-204ENST00000474020 WFDC13Q8IUB5 93 aa3.59□□□□□ -1.83
ATPAF1-204ENST00000474020 KRTAP13-1Q8IUC0 172 aa3.59□□□□□ -1.83
ATPAF1-204ENST00000474020 PRR15Q8IV56 129 aa3.59□□□□□ -1.83
ATPAF1-204ENST00000474020 ZNF861PO60384 105 aa3.58□□□□□ -1.84
ATPAF1-204ENST00000474020 KRTAP11-1Q8IUC1 163 aa3.58□□□□□ -1.84
ATPAF1-204ENST00000474020 SMIM26A0A096LP01 95 aa3.57□□□□□ -1.84
ATPAF1-204ENST00000474020 MOBPQ13875 183 aa3.57□□□□□ -1.84
ATPAF1-204ENST00000474020 DEFB116Q30KQ4 102 aa3.57□□□□□ -1.84
ATPAF1-204ENST00000474020 STAB2Q8WWQ8 2551 aa3.57□□□□□ -1.84
ATPAF1-204ENST00000474020 PSORS1C2Q9UIG4 136 aa3.57□□□□□ -1.84
ATPAF1-204ENST00000474020 A0A0G2JQZ4 141 aa3.56□□□□□ -1.84
ATPAF1-204ENST00000474020 LCE6AA0A183 80 aa3.56□□□□□ -1.84
ATPAF1-204ENST00000474020 PANO1I0J062 215 aa3.56□□□□□ -1.84
ATPAF1-204ENST00000474020 LINC00472Q9H8W2 130 aa3.56□□□□□ -1.84
ATPAF1-204ENST00000474020 TP53AIP1Q9HCN2 124 aa3.56□□□□□ -1.84
ATPAF1-204ENST00000474020 hDV103S1A0JD37 113 aa3.55□□□□□ -1.84
ATPAF1-204ENST00000474020 IGLV7-43P04211 117 aa3.55□□□□□ -1.84
ATPAF1-204ENST00000474020 H0Y9P7 68 aa3.54□□□□□ -1.84
ATPAF1-204ENST00000474020 CD164Q04900 197 aa3.54□□□□□ -1.84
ATPAF1-204ENST00000474020 HRCT1Q6UXD1 115 aa3.53□□□□□ -1.84
ATPAF1-204ENST00000474020 SSBP3-AS1Q7Z2R9 100 aa3.53□□□□□ -1.84
ATPAF1-204ENST00000474020 COL7A1Q02388 2944 aa3.53□□□□□ -1.84
ATPAF1-204ENST00000474020 TRAV22A0A0B4J277 110 aa3.52□□□□□ -1.85
ATPAF1-204ENST00000474020 A0A1B0GVX0 72 aa3.52□□□□□ -1.85
ATPAF1-204ENST00000474020 LINC00208Q96KT6 92 aa3.52□□□□□ -1.85
ATPAF1-204ENST00000474020 HUWE1Q7Z6Z7 4374 aaKnown RBP3.51□□□□□ -1.85
ATPAF1-204ENST00000474020 IGHV6-1A0A0B4J1U7 121 aa3.51□□□□□ -1.85
ATPAF1-204ENST00000474020 MMP24-AS1A0A0U1RRL7 71 aa3.51□□□□□ -1.85
ATPAF1-204ENST00000474020 NDUFS5O43920 106 aa3.51□□□□□ -1.85
ATPAF1-204ENST00000474020 CIRBP-AS1Q8TBR5 109 aa3.51□□□□□ -1.85
ATPAF1-204ENST00000474020 ZCCHC13Q8WW36 166 aaKnown RBP3.51□□□□□ -1.85
ATPAF1-204ENST00000474020 C8orf17Q9NRJ1 99 aa3.51□□□□□ -1.85
ATPAF1-204ENST00000474020 RYR2Q92736 4967 aa3.51□□□□□ -1.85
ATPAF1-204ENST00000474020 C8orf87E5RJ46 101 aa3.5□□□□□ -1.85
ATPAF1-204ENST00000474020 FAM229BQ4G0N7 80 aa3.5□□□□□ -1.85
ATPAF1-204ENST00000474020 SPANXA2-OT1Q8N9U9 137 aa3.5□□□□□ -1.85
ATPAF1-204ENST00000474020 C1orf64Q8NEQ6 169 aa3.5□□□□□ -1.85
ATPAF1-204ENST00000474020 CYP4F30PQ9H0H9 118 aa3.5□□□□□ -1.85
ATPAF1-204ENST00000474020 TENM2Q9NT68 2774 aa3.49□□□□□ -1.85
ATPAF1-204ENST00000474020 OXTP01178 125 aa3.49□□□□□ -1.85
ATPAF1-204ENST00000474020 LIMD2Q9BT23 127 aa3.49□□□□□ -1.85
ATPAF1-204ENST00000474020 V9GYY9 64 aa3.49□□□□□ -1.85
ATPAF1-204ENST00000474020 DNAH9Q9NYC9 4486 aa3.48□□□□□ -1.85
ATPAF1-204ENST00000474020 Q96NJ1 140 aa3.48□□□□□ -1.85
ATPAF1-204ENST00000474020 MRPL34Q9BQ48 92 aaKnown RBP3.48□□□□□ -1.85
ATPAF1-204ENST00000474020 HERC2O95714 4834 aa3.48□□□□□ -1.85
ATPAF1-204ENST00000474020 ASB16-AS1Q495Z4 193 aa3.47□□□□□ -1.85
ATPAF1-204ENST00000474020 Q5XG85 94 aa3.47□□□□□ -1.85
ATPAF1-204ENST00000474020 SPINK6Q6UWN8 80 aa3.47□□□□□ -1.85
ATPAF1-204ENST00000474020 LINC00336Q6ZUF6 198 aa3.47□□□□□ -1.85
ATPAF1-204ENST00000474020 ANAPC11Q9NYG5 84 aa3.47□□□□□ -1.85
ATPAF1-204ENST00000474020 UBR4Q5T4S7 5183 aa3.47□□□□□ -1.85
ATPAF1-204ENST00000474020 LOC101927531A0A1B0GV80 90 aa3.46□□□□□ -1.86
ATPAF1-204ENST00000474020 C4orf26Q17RF5 130 aa3.46□□□□□ -1.86
ATPAF1-204ENST00000474020 Q6ZSA8 131 aa3.46□□□□□ -1.86
ATPAF1-204ENST00000474020 KRTAP10-5P60370 271 aa3.45□□□□□ -1.86
ATPAF1-204ENST00000474020 KRTAP10-1P60331 282 aa3.44□□□□□ -1.86
ATPAF1-204ENST00000474020 PRR4Q16378 134 aa3.44□□□□□ -1.86
ATPAF1-204ENST00000474020 C1orf195Q5TG92 126 aa3.44□□□□□ -1.86
ATPAF1-204ENST00000474020 LINC00313P59037 77 aa3.43□□□□□ -1.86
ATPAF1-204ENST00000474020 FP248Q71RG6 208 aaPredicted RBP3.43□□□□□ -1.86
ATPAF1-204ENST00000474020 DNAH1Q9P2D7 4330 aa3.43□□□□□ -1.86
ATPAF1-204ENST00000474020 DNAH7Q8WXX0 4024 aa3.42□□□□□ -1.86
ATPAF1-204ENST00000474020 IGLV7-46A0A075B6I9 117 aa3.42□□□□□ -1.86
ATPAF1-204ENST00000474020 Q1T7F1 81 aa3.42□□□□□ -1.86
ATPAF1-204ENST00000474020 PCOTHQ58A44 107 aa3.42□□□□□ -1.86
ATPAF1-204ENST00000474020 SPINK1P00995 79 aa3.41□□□□□ -1.86
ATPAF1-204ENST00000474020 SPAG11AQ6PDA7 123 aa3.41□□□□□ -1.86
ATPAF1-204ENST00000474020 TYMSOSQ8TAI1 123 aa3.41□□□□□ -1.86
ATPAF1-204ENST00000474020 PRO0628Q9UI54 55 aa3.41□□□□□ -1.86
ATPAF1-204ENST00000474020 DYNC2H1Q8NCM8 4307 aaKnown RBP3.4□□□□□ -1.86
ATPAF1-204ENST00000474020 CSMD3Q7Z407 3707 aa3.4□□□□□ -1.87
ATPAF1-204ENST00000474020 SEC61BP60468 96 aaKnown RBP3.39□□□□□ -1.87
ATPAF1-204ENST00000474020 RPS29P62273 56 aaKnown RBP3.39□□□□□ -1.87
ATPAF1-204ENST00000474020 COA5Q86WW8 74 aa3.39□□□□□ -1.87
ATPAF1-204ENST00000474020 BRK1Q8WUW1 75 aa3.39□□□□□ -1.87
ATPAF1-204ENST00000474020 LYSTQ99698 3801 aa3.39□□□□□ -1.87
ATPAF1-204ENST00000474020 A0A087X002 238 aa3.38□□□□□ -1.87
ATPAF1-204ENST00000474020 KRTAP13-2Q52LG2 175 aa3.38□□□□□ -1.87
ATPAF1-204ENST00000474020 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
ATPAF1-204ENST00000474020 CHKB-CPT1BH3BT56 60 aa3.37□□□□□ -1.87
ATPAF1-204ENST00000474020 ACYP2P14621 99 aa3.37□□□□□ -1.87
ATPAF1-204ENST00000474020 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
ATPAF1-204ENST00000474020 LINC00304Q8N9R0 145 aa3.37□□□□□ -1.87
ATPAF1-204ENST00000474020 KRTAP1-4P0C5Y4 121 aa3.36□□□□□ -1.87
ATPAF1-204ENST00000474020 NOTCH2NLQ7Z3S9 236 aa3.36□□□□□ -1.87
ATPAF1-204ENST00000474020 PSPHP1O15172 72 aa3.35□□□□□ -1.87
ATPAF1-204ENST00000474020 SACSQ9NZJ4 4579 aa3.35□□□□□ -1.87
ATPAF1-204ENST00000474020 ABCA13Q86UQ4 5058 aa3.34□□□□□ -1.87
ATPAF1-204ENST00000474020 PRR15LQ9BU68 103 aa3.34□□□□□ -1.87
ATPAF1-204ENST00000474020 FRAS1Q86XX4 4008 aa3.33□□□□□ -1.88
ATPAF1-204ENST00000474020 VPS13DQ5THJ4 4388 aa3.33□□□□□ -1.88
ATPAF1-204ENST00000474020 Q5W150 140 aa3.33□□□□□ -1.88
ATPAF1-204ENST00000474020 A8MUN3 132 aa3.32□□□□□ -1.88
ATPAF1-204ENST00000474020 HRES1P13985 223 aa3.32□□□□□ -1.88
ATPAF1-204ENST00000474020 ALMS1Q8TCU4 4167 aa3.32□□□□□ -1.88
ATPAF1-204ENST00000474020 PLECQ15149 4684 aaKnown RBP3.32□□□□□ -1.88
ATPAF1-204ENST00000474020 KIAA1109Q2LD37 5005 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms