RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 TXNDC17Q9BRA2 123 aa3.16□□□□□ -1.9
RTF1-203ENST00000473214 KMT2AQ03164 3969 aa3.16□□□□□ -1.9
RTF1-203ENST00000473214 IGKV4-1P06312 121 aa3.15□□□□□ -1.91
RTF1-203ENST00000473214 SPINK7P58062 85 aa3.15□□□□□ -1.91
RTF1-203ENST00000473214 NREPQ16612 68 aa3.15□□□□□ -1.91
RTF1-203ENST00000473214 C10orf113Q5VZT2 155 aa3.15□□□□□ -1.91
RTF1-203ENST00000473214 TOMM5Q8N4H5 51 aa3.15□□□□□ -1.91
RTF1-203ENST00000473214 ZNF625Q96I27 306 aaPredicted RBP3.15□□□□□ -1.91
RTF1-203ENST00000473214 DYNC1H1Q14204 4646 aaKnown RBP3.15□□□□□ -1.91
RTF1-203ENST00000473214 TRAV21A0A0B4J279 112 aa3.14□□□□□ -1.91
RTF1-203ENST00000473214 M0R2N4 97 aa3.14□□□□□ -1.91
RTF1-203ENST00000473214 TMEM263Q8WUH6 116 aaKnown RBP3.14□□□□□ -1.91
RTF1-203ENST00000473214 PKHD1P08F94 4074 aa3.13□□□□□ -1.91
RTF1-203ENST00000473214 H3BUX3 64 aa3.13□□□□□ -1.91
RTF1-203ENST00000473214 PRH1P02810 166 aa3.13□□□□□ -1.91
RTF1-203ENST00000473214 KRTAP1-4P0C5Y4 121 aa3.13□□□□□ -1.91
RTF1-203ENST00000473214 ACYP2P14621 99 aa3.13□□□□□ -1.91
RTF1-203ENST00000473214 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
RTF1-203ENST00000473214 SPATA8Q6RVD6 105 aa3.13□□□□□ -1.91
RTF1-203ENST00000473214 HSPG2P98160 4391 aa3.13□□□□□ -1.91
RTF1-203ENST00000473214 FCER1GP30273 86 aa3.12□□□□□ -1.91
RTF1-203ENST00000473214 TRBV30A0A0K0K1B3 111 aa3.11□□□□□ -1.91
RTF1-203ENST00000473214 J3QRE1 110 aa3.11□□□□□ -1.91
RTF1-203ENST00000473214 FAT2Q9NYQ8 4349 aa3.11□□□□□ -1.91
RTF1-203ENST00000473214 VPS13DQ5THJ4 4388 aa3.11□□□□□ -1.91
RTF1-203ENST00000473214 LY6G6CO95867 125 aa3.1□□□□□ -1.91
RTF1-203ENST00000473214 CAV3P56539 151 aa3.1□□□□□ -1.91
RTF1-203ENST00000473214 DNAH11Q96DT5 4516 aa3.1□□□□□ -1.91
RTF1-203ENST00000473214 DNAH2Q9P225 4427 aa3.09□□□□□ -1.91
RTF1-203ENST00000473214 LINC00472Q9H8W2 130 aa3.09□□□□□ -1.91
RTF1-203ENST00000473214 Q6ZQY7 126 aa3.08□□□□□ -1.92
RTF1-203ENST00000473214 Q6ZRN7 208 aaPredicted RBP3.08□□□□□ -1.92
RTF1-203ENST00000473214 GAFA1Q96PS6 74 aa3.08□□□□□ -1.92
RTF1-203ENST00000473214 RPL38P63173 70 aaKnown RBP3.07□□□□□ -1.92
RTF1-203ENST00000473214 DEFB136Q30KP8 78 aa3.07□□□□□ -1.92
RTF1-203ENST00000473214 IGFL1Q6UW32 110 aa3.07□□□□□ -1.92
RTF1-203ENST00000473214 TRBV6-1A0A0K0K1D8 114 aa3.06□□□□□ -1.92
RTF1-203ENST00000473214 ENHOQ6UWT2 76 aa3.06□□□□□ -1.92
RTF1-203ENST00000473214 PKD1P98161 4303 aa3.05□□□□□ -1.92
RTF1-203ENST00000473214 DNAH17Q9UFH2 4485 aa3.05□□□□□ -1.92
RTF1-203ENST00000473214 DNAH6Q9C0G6 4158 aa3.05□□□□□ -1.92
RTF1-203ENST00000473214 UBL5Q9BZL1 73 aa3.04□□□□□ -1.92
RTF1-203ENST00000473214 NMES1Q9C002 83 aa3.04□□□□□ -1.92
RTF1-203ENST00000473214 DMBT1Q9UGM3 2413 aaPredicted RBP3.02□□□□□ -1.93
RTF1-203ENST00000473214 A0A1B0GU69 56 aa3.02□□□□□ -1.93
RTF1-203ENST00000473214 KRTAP10-8P60410 259 aa3.02□□□□□ -1.93
RTF1-203ENST00000473214 CMC2Q9NRP2 79 aa3.02□□□□□ -1.93
RTF1-203ENST00000473214 SORL1Q92673 2214 aa3.01□□□□□ -1.93
RTF1-203ENST00000473214 APOBP04114 4563 aaKnown RBP3.01□□□□□ -1.93
RTF1-203ENST00000473214 ZCCHC13Q8WW36 166 aaKnown RBP3.01□□□□□ -1.93
RTF1-203ENST00000473214 KAAG1Q9UBP8 84 aa3.01□□□□□ -1.93
RTF1-203ENST00000473214 MYCBP2O75592 4640 aa3□□□□□ -1.93
RTF1-203ENST00000473214 H3BSH0 61 aa3□□□□□ -1.93
RTF1-203ENST00000473214 K7EMI3 77 aa3□□□□□ -1.93
RTF1-203ENST00000473214 M0R1W7 72 aa3□□□□□ -1.93
RTF1-203ENST00000473214 LCE3AQ5TA76 89 aa3□□□□□ -1.93
RTF1-203ENST00000473214 LRP1BQ9NZR2 4599 aa3□□□□□ -1.93
RTF1-203ENST00000473214 TNCP24821 2201 aa2.99□□□□□ -1.93
RTF1-203ENST00000473214 LINC00959A0A1B0GUT2 108 aa2.99□□□□□ -1.93
RTF1-203ENST00000473214 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.99□□□□□ -1.93
RTF1-203ENST00000473214 OBSCN-AS1Q96MR7 158 aa2.99□□□□□ -1.93
RTF1-203ENST00000473214 HMCN2Q8NDA2 5059 aa2.97□□□□□ -1.93
RTF1-203ENST00000473214 CPSF4LA6NMK7 179 aaKnown RBP2.97□□□□□ -1.93
RTF1-203ENST00000473214 HAMPP81172 84 aa2.97□□□□□ -1.93
RTF1-203ENST00000473214 PP632Q6XCG6 107 aa2.97□□□□□ -1.93
RTF1-203ENST00000473214 Q6ZRX8 168 aa2.96□□□□□ -1.94
RTF1-203ENST00000473214 ABRACLQ9P1F3 81 aa2.96□□□□□ -1.94
RTF1-203ENST00000473214 NDUFA4O00483 81 aa2.95□□□□□ -1.94
RTF1-203ENST00000473214 NCR3O14931 201 aa2.95□□□□□ -1.94
RTF1-203ENST00000473214 SMIM11BQ8TCY0 68 aa2.95□□□□□ -1.94
RTF1-203ENST00000473214 PLAC4Q8WY50 150 aa2.95□□□□□ -1.94
RTF1-203ENST00000473214 FLG2Q5D862 2391 aaPredicted RBP2.95□□□□□ -1.94
RTF1-203ENST00000473214 RPS27P42677 84 aaKnown RBP2.94□□□□□ -1.94
RTF1-203ENST00000473214 FAT1Q14517 4588 aa2.93□□□□□ -1.94
RTF1-203ENST00000473214 COX7BP24311 80 aa2.93□□□□□ -1.94
RTF1-203ENST00000473214 SSBP3-AS1Q7Z2R9 100 aa2.93□□□□□ -1.94
RTF1-203ENST00000473214 DNAH5Q8TE73 4624 aa2.92□□□□□ -1.94
RTF1-203ENST00000473214 GVQW2A0A096LPI5 108 aaPredicted RBP2.92□□□□□ -1.94
RTF1-203ENST00000473214 G3V318 75 aa2.92□□□□□ -1.94
RTF1-203ENST00000473214 PLNP26678 52 aa2.91□□□□□ -1.94
RTF1-203ENST00000473214 FXYD6P3P58550 94 aa2.91□□□□□ -1.94
RTF1-203ENST00000473214 MINOS1Q5TGZ0 78 aa2.91□□□□□ -1.94
RTF1-203ENST00000473214 SERF2P84101 59 aa2.9□□□□□ -1.95
RTF1-203ENST00000473214 LEAP2Q969E1 77 aa2.9□□□□□ -1.95
RTF1-203ENST00000473214 APLNQ9ULZ1 77 aa2.9□□□□□ -1.95
RTF1-203ENST00000473214 SRRM2Q9UQ35 2752 aaKnown RBP2.9□□□□□ -1.95
RTF1-203ENST00000473214 RNF213Q63HN8 5207 aa2.9□□□□□ -1.95
RTF1-203ENST00000473214 VPS13BQ7Z7G8 4022 aa2.9□□□□□ -1.95
RTF1-203ENST00000473214 ARL14EPLP0DKL9 152 aa2.89□□□□□ -1.95
RTF1-203ENST00000473214 SMIM27A0A1W2PRY6 76 aa2.88□□□□□ -1.95
RTF1-203ENST00000473214 DEFB135Q30KP9 77 aa2.87□□□□□ -1.95
RTF1-203ENST00000473214 KRTAP13-3Q3SY46 172 aa2.87□□□□□ -1.95
RTF1-203ENST00000473214 UNQ6190/PRO20217Q6UXQ8 127 aa2.87□□□□□ -1.95
RTF1-203ENST00000473214 DEFB4AO15263 64 aa2.86□□□□□ -1.95
RTF1-203ENST00000473214 Q5VSD8 79 aa2.86□□□□□ -1.95
RTF1-203ENST00000473214 I3L3M4 83 aa2.85□□□□□ -1.95
RTF1-203ENST00000473214 SPINK13Q1W4C9 94 aa2.85□□□□□ -1.95
RTF1-203ENST00000473214 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
RTF1-203ENST00000473214 LRP1Q07954 4544 aaKnown RBP2.84□□□□□ -1.95
RTF1-203ENST00000473214 IGIPA6NJ69 53 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 232.8 ms