RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 APOBP04114 4563 aaKnown RBP10.54□□□□□ -0.72
GCFC2-208ENST00000472230 LINC00304Q8N9R0 145 aa10.54□□□□□ -0.72
GCFC2-208ENST00000472230 C5orf47Q569G3 176 aa10.54□□□□□ -0.72
GCFC2-208ENST00000472230 C1orf195Q5TG92 126 aa10.54□□□□□ -0.72
GCFC2-208ENST00000472230 TMEM258P61165 79 aa10.52□□□□□ -0.73
GCFC2-208ENST00000472230 SPAG11AQ6PDA7 123 aa10.52□□□□□ -0.73
GCFC2-208ENST00000472230 A0A0U1RQV1 116 aa10.51□□□□□ -0.73
GCFC2-208ENST00000472230 NDUFC1O43677 76 aa10.5□□□□□ -0.73
GCFC2-208ENST00000472230 C8orf87E5RJ46 101 aa10.49□□□□□ -0.73
GCFC2-208ENST00000472230 MRPL34Q9BQ48 92 aaKnown RBP10.49□□□□□ -0.73
GCFC2-208ENST00000472230 MP68P56378 58 aa10.48□□□□□ -0.73
GCFC2-208ENST00000472230 NOTCH2NLQ7Z3S9 236 aa10.48□□□□□ -0.73
GCFC2-208ENST00000472230 NDUFS5O43920 106 aa10.47□□□□□ -0.73
GCFC2-208ENST00000472230 Q5VSD8 79 aa10.47□□□□□ -0.73
GCFC2-208ENST00000472230 H7BZZ5 65 aa10.46□□□□□ -0.73
GCFC2-208ENST00000472230 RPS29P62273 56 aaKnown RBP10.46□□□□□ -0.73
GCFC2-208ENST00000472230 TP53AIP1Q9HCN2 124 aa10.45□□□□□ -0.74
GCFC2-208ENST00000472230 H0Y9P7 68 aa10.44□□□□□ -0.74
GCFC2-208ENST00000472230 LINC00313P59037 77 aa10.44□□□□□ -0.74
GCFC2-208ENST00000472230 TRAV22A0A0B4J277 110 aa10.4□□□□□ -0.75
GCFC2-208ENST00000472230 LINC00208Q96KT6 92 aa10.4□□□□□ -0.75
GCFC2-208ENST00000472230 RYR3Q15413 4870 aa10.39□□□□□ -0.75
GCFC2-208ENST00000472230 FAM236DA0A1B0GTK5 79 aa10.39□□□□□ -0.75
GCFC2-208ENST00000472230 H3BPC8 53 aa10.39□□□□□ -0.75
GCFC2-208ENST00000472230 FAM236CP0DP71 79 aa10.39□□□□□ -0.75
GCFC2-208ENST00000472230 FAT1Q14517 4588 aa10.39□□□□□ -0.75
GCFC2-208ENST00000472230 ZCCHC13Q8WW36 166 aaKnown RBP10.38□□□□□ -0.75
GCFC2-208ENST00000472230 C1orf64Q8NEQ6 169 aa10.33□□□□□ -0.76
GCFC2-208ENST00000472230 ATP5EP56381 51 aaPredicted RBP10.31□□□□□ -0.76
GCFC2-208ENST00000472230 PKHD1L1Q86WI1 4243 aa10.27□□□□□ -0.77
GCFC2-208ENST00000472230 Q8N1X5 172 aa10.27□□□□□ -0.77
GCFC2-208ENST00000472230 Q8N9P0 234 aaPredicted RBP10.26□□□□□ -0.77
GCFC2-208ENST00000472230 KRTAP16-1A8MUX0 517 aa10.26□□□□□ -0.77
GCFC2-208ENST00000472230 HSPG2P98160 4391 aa10.24□□□□□ -0.77
GCFC2-208ENST00000472230 KRTAP10-8P60410 259 aa10.24□□□□□ -0.77
GCFC2-208ENST00000472230 RPS28P62857 69 aaKnown RBP10.23□□□□□ -0.77
GCFC2-208ENST00000472230 KRTAP17-1Q9BYP8 105 aa10.22□□□□□ -0.77
GCFC2-208ENST00000472230 Q5W150 140 aa10.21□□□□□ -0.77
GCFC2-208ENST00000472230 RETNLBQ9BQ08 111 aa10.2□□□□□ -0.78
GCFC2-208ENST00000472230 SERP1Q9Y6X1 66 aa10.19□□□□□ -0.78
GCFC2-208ENST00000472230 LOC101927531A0A1B0GV80 90 aa10.18□□□□□ -0.78
GCFC2-208ENST00000472230 RYR1P21817 5038 aa10.17□□□□□ -0.78
GCFC2-208ENST00000472230 KRTAP13-3Q3SY46 172 aa10.17□□□□□ -0.78
GCFC2-208ENST00000472230 PCOTHQ58A44 107 aa10.16□□□□□ -0.78
GCFC2-208ENST00000472230 C9orf92A6NGG3 77 aa10.14□□□□□ -0.79
GCFC2-208ENST00000472230 PRR4Q16378 134 aa10.13□□□□□ -0.79
GCFC2-208ENST00000472230 SPANXA2-OT1Q8N9U9 137 aa10.13□□□□□ -0.79
GCFC2-208ENST00000472230 CYP4F30PQ9H0H9 118 aa10.1□□□□□ -0.79
GCFC2-208ENST00000472230 OXTP01178 125 aa10.09□□□□□ -0.79
GCFC2-208ENST00000472230 FLG2Q5D862 2391 aaPredicted RBP10.09□□□□□ -0.79
GCFC2-208ENST00000472230 KIAA1109Q2LD37 5005 aa10.05□□□□□ -0.8
GCFC2-208ENST00000472230 IGLV7-46A0A075B6I9 117 aa10.05□□□□□ -0.8
GCFC2-208ENST00000472230 IGKV2-30P06310 120 aa10.04□□□□□ -0.8
GCFC2-208ENST00000472230 MT1HL1P0DM35 61 aa10.03□□□□□ -0.8
GCFC2-208ENST00000472230 FP248Q71RG6 208 aaPredicted RBP10.03□□□□□ -0.8
GCFC2-208ENST00000472230 EPPK1P58107 5090 aaKnown RBP10.03□□□□□ -0.8
GCFC2-208ENST00000472230 C20orf166-AS1Q96NR2 134 aa10.02□□□□□ -0.81
GCFC2-208ENST00000472230 LRP1Q07954 4544 aaKnown RBP10.01□□□□□ -0.81
GCFC2-208ENST00000472230 A8MUU9 505 aa10.01□□□□□ -0.81
GCFC2-208ENST00000472230 IGKV2D-30A0A075B6S6 120 aa9.99□□□□□ -0.81
GCFC2-208ENST00000472230 TNXBP22105 4242 aa9.99□□□□□ -0.81
GCFC2-208ENST00000472230 SMIM26A0A096LP01 95 aa9.96□□□□□ -0.82
GCFC2-208ENST00000472230 FAT3Q8TDW7 4589 aa9.95□□□□□ -0.82
GCFC2-208ENST00000472230 KRTAP4-5Q9BYR2 181 aa9.94□□□□□ -0.82
GCFC2-208ENST00000472230 HRES1P13985 223 aa9.93□□□□□ -0.82
GCFC2-208ENST00000472230 C7orf65Q6ZTY9 151 aa9.91□□□□□ -0.82
GCFC2-208ENST00000472230 Q75L30 129 aa9.91□□□□□ -0.82
GCFC2-208ENST00000472230 DMBT1Q9UGM3 2413 aaPredicted RBP9.89□□□□□ -0.83
GCFC2-208ENST00000472230 COA5Q86WW8 74 aa9.87□□□□□ -0.83
GCFC2-208ENST00000472230 ACYP2P14621 99 aa9.82□□□□□ -0.84
GCFC2-208ENST00000472230 ATP11AUNQ6ZP68 121 aa9.81□□□□□ -0.84
GCFC2-208ENST00000472230 DMAC1Q96GE9 116 aa9.8□□□□□ -0.84
GCFC2-208ENST00000472230 MPLKIPQ8TAP9 179 aa9.8□□□□□ -0.84
GCFC2-208ENST00000472230 XP32Q5T750 250 aa9.79□□□□□ -0.84
GCFC2-208ENST00000472230 MYCBP2O75592 4640 aa9.78□□□□□ -0.84
GCFC2-208ENST00000472230 RPL37P61927 97 aaKnown RBP9.78□□□□□ -0.84
GCFC2-208ENST00000472230 J3QL48 77 aa9.75□□□□□ -0.85
GCFC2-208ENST00000472230 SPINK7P58062 85 aa9.75□□□□□ -0.85
GCFC2-208ENST00000472230 C4orf26Q17RF5 130 aa9.73□□□□□ -0.85
GCFC2-208ENST00000472230 CHKB-CPT1BH3BT56 60 aa9.71□□□□□ -0.86
GCFC2-208ENST00000472230 TPRXLQ17RH7 258 aa9.7□□□□□ -0.86
GCFC2-208ENST00000472230 Q1T7F1 81 aa9.7□□□□□ -0.86
GCFC2-208ENST00000472230 V9GYY9 64 aa9.68□□□□□ -0.86
GCFC2-208ENST00000472230 A8MUN3 132 aa9.66□□□□□ -0.86
GCFC2-208ENST00000472230 BIRC6Q9NR09 4857 aa9.59□□□□□ -0.87
GCFC2-208ENST00000472230 PSPHP1O15172 72 aa9.56□□□□□ -0.88
GCFC2-208ENST00000472230 COX6B2Q6YFQ2 88 aa9.53□□□□□ -0.88
GCFC2-208ENST00000472230 PRR15LQ9BU68 103 aa9.52□□□□□ -0.89
GCFC2-208ENST00000472230 HERC2O95714 4834 aa9.52□□□□□ -0.89
GCFC2-208ENST00000472230 LINC01558Q9Y6Z2 57 aa9.52□□□□□ -0.89
GCFC2-208ENST00000472230 ABCA13Q86UQ4 5058 aa9.51□□□□□ -0.89
GCFC2-208ENST00000472230 KRTAP3-1Q9BYR8 98 aa9.5□□□□□ -0.89
GCFC2-208ENST00000472230 SPTSSBQ8NFR3 76 aa9.45□□□□□ -0.9
GCFC2-208ENST00000472230 Q5VV11 94 aa9.43□□□□□ -0.9
GCFC2-208ENST00000472230 SEC61BP60468 96 aaKnown RBP9.4□□□□□ -0.9
GCFC2-208ENST00000472230 A0A1B0GU69 56 aa9.35□□□□□ -0.91
GCFC2-208ENST00000472230 BRK1Q8WUW1 75 aa9.34□□□□□ -0.91
GCFC2-208ENST00000472230 LPAP08519 4548 aa9.33□□□□□ -0.92
GCFC2-208ENST00000472230 RBM12B-AS1Q9P1G2 102 aa9.31□□□□□ -0.92
GCFC2-208ENST00000472230 LRP2P98164 4655 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms