RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 SPTBN5Q9NRC6 3674 aaKnown RBP-2.5□□□□□ -2.81
MDM2-216ENST00000471946 IFI27P40305 119 aaPredicted RBP-2.5□□□□□ -2.81
MDM2-216ENST00000471946 CHD7Q9P2D1 2997 aa-2.51□□□□□ -2.81
MDM2-216ENST00000471946 UMAD1C9J7I0 102 aa-2.51□□□□□ -2.81
MDM2-216ENST00000471946 NDUFA4O00483 81 aa-2.51□□□□□ -2.81
MDM2-216ENST00000471946 S100A8P05109 93 aa-2.52□□□□□ -2.81
MDM2-216ENST00000471946 DYNC2H1Q8NCM8 4307 aaKnown RBP-2.53□□□□□ -2.81
MDM2-216ENST00000471946 BPTFQ12830 3046 aa-2.53□□□□□ -2.81
MDM2-216ENST00000471946 PYY3Q5JQD4 70 aa-2.54□□□□□ -2.82
MDM2-216ENST00000471946 S100A16Q96FQ6 103 aaKnown RBP-2.54□□□□□ -2.82
MDM2-216ENST00000471946 KIAA0586Q9BVV6 1533 aa-2.54□□□□□ -2.82
MDM2-216ENST00000471946 RNF17Q9BXT8 1623 aaKnown RBP-2.54□□□□□ -2.82
MDM2-216ENST00000471946 CCNB3Q8WWL7 1395 aa-2.55□□□□□ -2.82
MDM2-216ENST00000471946 NRAPQ86VF7 1730 aa-2.56□□□□□ -2.82
MDM2-216ENST00000471946 MT1HL1P0DM35 61 aa-2.57□□□□□ -2.82
MDM2-216ENST00000471946 KIF1AQ12756 1690 aa-2.57□□□□□ -2.82
MDM2-216ENST00000471946 ITPR1Q14643 2758 aa-2.57□□□□□ -2.82
MDM2-216ENST00000471946 SMR3BP02814 79 aaPredicted RBP-2.58□□□□□ -2.82
MDM2-216ENST00000471946 NREPQ16612 68 aa-2.59□□□□□ -2.82
MDM2-216ENST00000471946 TTC37Q6PGP7 1564 aa-2.59□□□□□ -2.82
MDM2-216ENST00000471946 CSMD1Q96PZ7 3565 aa-2.6□□□□□ -2.83
MDM2-216ENST00000471946 LY75O60449 1722 aa-2.62□□□□□ -2.83
MDM2-216ENST00000471946 COL6A5A8TX70 2615 aa-2.62□□□□□ -2.83
MDM2-216ENST00000471946 Q9H521 79 aa-2.62□□□□□ -2.83
MDM2-216ENST00000471946 MT1EP04732 61 aa-2.63□□□□□ -2.83
MDM2-216ENST00000471946 CDC42BPAQ5VT25 1732 aa-2.64□□□□□ -2.83
MDM2-216ENST00000471946 DEFB131BA0A096LNP1 70 aa-2.64□□□□□ -2.83
MDM2-216ENST00000471946 DNAH17Q9UFH2 4485 aa-2.64□□□□□ -2.83
MDM2-216ENST00000471946 LRBAP50851 2863 aa-2.65□□□□□ -2.83
MDM2-216ENST00000471946 NHSQ6T4R5 1651 aa-2.66□□□□□ -2.83
MDM2-216ENST00000471946 LRRIQ1Q96JM4 1722 aa-2.66□□□□□ -2.84
MDM2-216ENST00000471946 ATP5EP2Q5VTU8 51 aa-2.67□□□□□ -2.84
MDM2-216ENST00000471946 CLPSL2Q6UWE3 100 aa-2.67□□□□□ -2.84
MDM2-216ENST00000471946 V9GYS6 101 aa-2.67□□□□□ -2.84
MDM2-216ENST00000471946 EIF2AK4Q9P2K8 1649 aaKnown RBP-2.68□□□□□ -2.84
MDM2-216ENST00000471946 PVALEFA0A1B0GWK0 134 aa-2.68□□□□□ -2.84
MDM2-216ENST00000471946 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.68□□□□□ -2.84
MDM2-216ENST00000471946 CEP295Q9C0D2 2601 aa-2.68□□□□□ -2.84
MDM2-216ENST00000471946 SMG1Q96Q15 3661 aaKnown RBP-2.68□□□□□ -2.84
MDM2-216ENST00000471946 KDM5DQ9BY66 1539 aa-2.68□□□□□ -2.84
MDM2-216ENST00000471946 HFM1A2PYH4 1435 aa-2.68□□□□□ -2.84
MDM2-216ENST00000471946 MT1LQ93083 61 aa-2.69□□□□□ -2.84
MDM2-216ENST00000471946 INO80Q9ULG1 1556 aaPredicted RBP-2.7□□□□□ -2.84
MDM2-216ENST00000471946 MYO9AB2RTY4 2548 aa-2.7□□□□□ -2.84
MDM2-216ENST00000471946 ARHGAP35Q9NRY4 1499 aa-2.7□□□□□ -2.84
MDM2-216ENST00000471946 KANTRA0A1W2PQU2 76 aa-2.71□□□□□ -2.84
MDM2-216ENST00000471946 MRPL33O75394 65 aaKnown RBP-2.71□□□□□ -2.84
MDM2-216ENST00000471946 WT1-ASQ06250 92 aa-2.71□□□□□ -2.84
MDM2-216ENST00000471946 EYSQ5T1H1 3165 aa-2.71□□□□□ -2.84
MDM2-216ENST00000471946 MMP24-AS1A0A0U1RRL7 71 aa-2.73□□□□□ -2.85
MDM2-216ENST00000471946 TNP1P09430 55 aa-2.73□□□□□ -2.85
MDM2-216ENST00000471946 DNAH5Q8TE73 4624 aa-2.73□□□□□ -2.85
MDM2-216ENST00000471946 TRRAPQ9Y4A5 3859 aa-2.74□□□□□ -2.85
MDM2-216ENST00000471946 SPTAN1Q13813 2472 aaKnown RBP-2.74□□□□□ -2.85
MDM2-216ENST00000471946 IGLV5-48A0A075B6I7 105 aa-2.75□□□□□ -2.85
MDM2-216ENST00000471946 A0A087WXM4 84 aa-2.75□□□□□ -2.85
MDM2-216ENST00000471946 DNAH10Q8IVF4 4471 aa-2.76□□□□□ -2.85
MDM2-216ENST00000471946 MT1GP13640 62 aa-2.76□□□□□ -2.85
MDM2-216ENST00000471946 KRTAP8-1Q8IUC2 63 aa-2.76□□□□□ -2.85
MDM2-216ENST00000471946 KCNQ1DNQ9H478 68 aa-2.76□□□□□ -2.85
MDM2-216ENST00000471946 RALGAPBQ86X10 1494 aa-2.77□□□□□ -2.85
MDM2-216ENST00000471946 TDRG1Q3Y452 100 aa-2.77□□□□□ -2.85
MDM2-216ENST00000471946 UACAQ9BZF9 1416 aa-2.77□□□□□ -2.85
MDM2-216ENST00000471946 MYO5CQ9NQX4 1742 aa-2.78□□□□□ -2.85
MDM2-216ENST00000471946 SMIM13P0DJ93 91 aa-2.78□□□□□ -2.85
MDM2-216ENST00000471946 UBL5Q9BZL1 73 aa-2.78□□□□□ -2.85
MDM2-216ENST00000471946 RPS27P42677 84 aaKnown RBP-2.79□□□□□ -2.86
MDM2-216ENST00000471946 RPS27LQ71UM5 84 aaKnown RBP-2.79□□□□□ -2.86
MDM2-216ENST00000471946 ADGRG4Q8IZF6 3080 aa-2.79□□□□□ -2.86
MDM2-216ENST00000471946 HMGA1P17096 107 aaKnown RBP-2.8□□□□□ -2.86
MDM2-216ENST00000471946 CRIP1P50238 77 aa-2.8□□□□□ -2.86
MDM2-216ENST00000471946 ABCA13Q86UQ4 5058 aa-2.8□□□□□ -2.86
MDM2-216ENST00000471946 MGAQ8IWI9 3026 aa-2.82□□□□□ -2.86
MDM2-216ENST00000471946 DEFB121Q5J5C9 76 aa-2.82□□□□□ -2.86
MDM2-216ENST00000471946 MINOS1Q5TGZ0 78 aa-2.83□□□□□ -2.86
MDM2-216ENST00000471946 CFAP46Q8IYW2 2715 aa-2.84□□□□□ -2.86
MDM2-216ENST00000471946 MT1MQ8N339 61 aa-2.84□□□□□ -2.86
MDM2-216ENST00000471946 DCAF1Q9Y4B6 1507 aa-2.86□□□□□ -2.87
MDM2-216ENST00000471946 MT2AP02795 61 aa-2.87□□□□□ -2.87
MDM2-216ENST00000471946 BVES-AS1Q5T3Y7 98 aa-2.87□□□□□ -2.87
MDM2-216ENST00000471946 LMTK2Q8IWU2 1503 aa-2.88□□□□□ -2.87
MDM2-216ENST00000471946 CD163L1Q9NR16 1453 aa-2.89□□□□□ -2.87
MDM2-216ENST00000471946 ST20Q9HBF5 79 aa-2.89□□□□□ -2.87
MDM2-216ENST00000471946 CFAP74Q9C0B2 1584 aa-2.9□□□□□ -2.87
MDM2-216ENST00000471946 NCBP2-AS2Q69YL0 99 aa-2.9□□□□□ -2.87
MDM2-216ENST00000471946 C3P01024 1663 aa-2.9□□□□□ -2.87
MDM2-216ENST00000471946 A0A1B0GUL6 1792 aa-2.9□□□□□ -2.87
MDM2-216ENST00000471946 MAST1Q9Y2H9 1570 aa-2.91□□□□□ -2.87
MDM2-216ENST00000471946 ABCC1P33527 1531 aa-2.92□□□□□ -2.88
MDM2-216ENST00000471946 MROH1Q8NDA8 1641 aa-2.92□□□□□ -2.88
MDM2-216ENST00000471946 H3BUA1 57 aa-2.93□□□□□ -2.88
MDM2-216ENST00000471946 H3BUT2 72 aa-2.93□□□□□ -2.88
MDM2-216ENST00000471946 ADIRFQ15847 76 aa-2.93□□□□□ -2.88
MDM2-216ENST00000471946 DMXL2Q8TDJ6 3036 aa-2.94□□□□□ -2.88
MDM2-216ENST00000471946 MT1BP07438 61 aa-2.94□□□□□ -2.88
MDM2-216ENST00000471946 NOP10Q9NPE3 64 aaKnown RBP-2.94□□□□□ -2.88
MDM2-216ENST00000471946 ENHOQ6UWT2 76 aa-2.95□□□□□ -2.88
MDM2-216ENST00000471946 C6orf48Q9UBA6 75 aa-2.95□□□□□ -2.88
MDM2-216ENST00000471946 ETDCA0A1B0GVM5 59 aa-2.96□□□□□ -2.88
MDM2-216ENST00000471946 FCER1GP30273 86 aa-2.96□□□□□ -2.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms