RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 ZNF706Q9Y5V0 76 aaPredicted RBP10.45□□□□□ -0.74
RRP1-202ENST00000471909 FAT2Q9NYQ8 4349 aa10.44□□□□□ -0.74
RRP1-202ENST00000471909 ANAPC11Q9NYG5 84 aa10.42□□□□□ -0.74
RRP1-202ENST00000471909 PKD1P98161 4303 aa10.42□□□□□ -0.74
RRP1-202ENST00000471909 MMP24-AS1A0A0U1RRL7 71 aa10.42□□□□□ -0.74
RRP1-202ENST00000471909 CIRBP-AS1Q8TBR5 109 aa10.42□□□□□ -0.74
RRP1-202ENST00000471909 CHKB-CPT1BH3BT56 60 aa10.41□□□□□ -0.74
RRP1-202ENST00000471909 PRR15LQ9BU68 103 aa10.41□□□□□ -0.74
RRP1-202ENST00000471909 IGLV7-43P04211 117 aa10.4□□□□□ -0.74
RRP1-202ENST00000471909 A8MU10 97 aa10.38□□□□□ -0.75
RRP1-202ENST00000471909 MOBPQ13875 183 aa10.37□□□□□ -0.75
RRP1-202ENST00000471909 COA5Q86WW8 74 aa10.37□□□□□ -0.75
RRP1-202ENST00000471909 IGLV7-46A0A075B6I9 117 aa10.36□□□□□ -0.75
RRP1-202ENST00000471909 KRTAP10-1P60331 282 aa10.36□□□□□ -0.75
RRP1-202ENST00000471909 Q6ZSA8 131 aa10.35□□□□□ -0.75
RRP1-202ENST00000471909 PCOTHQ58A44 107 aa10.32□□□□□ -0.76
RRP1-202ENST00000471909 TP53AIP1Q9HCN2 124 aa10.32□□□□□ -0.76
RRP1-202ENST00000471909 LRP1BQ9NZR2 4599 aa10.32□□□□□ -0.76
RRP1-202ENST00000471909 Q96NJ1 140 aa10.31□□□□□ -0.76
RRP1-202ENST00000471909 Q75L30 129 aa10.31□□□□□ -0.76
RRP1-202ENST00000471909 RBM12B-AS1Q9P1G2 102 aa10.3□□□□□ -0.76
RRP1-202ENST00000471909 LOC101927531A0A1B0GV80 90 aa10.29□□□□□ -0.76
RRP1-202ENST00000471909 ASB16-AS1Q495Z4 193 aa10.28□□□□□ -0.76
RRP1-202ENST00000471909 KTN1-AS1Q86SY8 53 aa10.28□□□□□ -0.76
RRP1-202ENST00000471909 A6NED7 52 aa10.28□□□□□ -0.76
RRP1-202ENST00000471909 C8orf17Q9NRJ1 99 aa10.27□□□□□ -0.77
RRP1-202ENST00000471909 SACSQ9NZJ4 4579 aa10.26□□□□□ -0.77
RRP1-202ENST00000471909 SPTSSBQ8NFR3 76 aa10.25□□□□□ -0.77
RRP1-202ENST00000471909 NDUFS5O43920 106 aa10.24□□□□□ -0.77
RRP1-202ENST00000471909 C4orf48Q5BLP8 95 aa10.24□□□□□ -0.77
RRP1-202ENST00000471909 LCA10Q71F78 164 aa10.24□□□□□ -0.77
RRP1-202ENST00000471909 IGHV6-1A0A0B4J1U7 121 aa10.22□□□□□ -0.77
RRP1-202ENST00000471909 ATP11AUNQ6ZP68 121 aa10.22□□□□□ -0.77
RRP1-202ENST00000471909 A0A1B0GVX0 72 aa10.21□□□□□ -0.78
RRP1-202ENST00000471909 SPAG11AQ6PDA7 123 aa10.2□□□□□ -0.78
RRP1-202ENST00000471909 CDK2AP2O75956 126 aa10.2□□□□□ -0.78
RRP1-202ENST00000471909 LINC01558Q9Y6Z2 57 aa10.19□□□□□ -0.78
RRP1-202ENST00000471909 PKHD1P08F94 4074 aa10.17□□□□□ -0.78
RRP1-202ENST00000471909 VPS13BQ7Z7G8 4022 aa10.17□□□□□ -0.78
RRP1-202ENST00000471909 A0A087X002 238 aa10.16□□□□□ -0.78
RRP1-202ENST00000471909 SSBP3-AS1Q7Z2R9 100 aa10.16□□□□□ -0.78
RRP1-202ENST00000471909 MRPL34Q9BQ48 92 aaKnown RBP10.16□□□□□ -0.78
RRP1-202ENST00000471909 CDC42SE1Q9NRR8 79 aa10.16□□□□□ -0.78
RRP1-202ENST00000471909 HRES1P13985 223 aa10.14□□□□□ -0.79
RRP1-202ENST00000471909 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
RRP1-202ENST00000471909 A6NN06 94 aa10.09□□□□□ -0.79
RRP1-202ENST00000471909 KRTAP1-4P0C5Y4 121 aa10.09□□□□□ -0.79
RRP1-202ENST00000471909 NOTCH2NLQ7Z3S9 236 aa10.09□□□□□ -0.79
RRP1-202ENST00000471909 SPINK6Q6UWN8 80 aa10.08□□□□□ -0.8
RRP1-202ENST00000471909 SPINK7P58062 85 aa10.04□□□□□ -0.8
RRP1-202ENST00000471909 DYNC1H1Q14204 4646 aaKnown RBP10.04□□□□□ -0.8
RRP1-202ENST00000471909 A0A1B0GVY2 172 aa10.01□□□□□ -0.81
RRP1-202ENST00000471909 PLA2G1BP04054 148 aaKnown RBP9.99□□□□□ -0.81
RRP1-202ENST00000471909 Q5W150 140 aa9.99□□□□□ -0.81
RRP1-202ENST00000471909 PRR26Q8N8Z3 221 aa9.99□□□□□ -0.81
RRP1-202ENST00000471909 C7orf65Q6ZTY9 151 aa9.98□□□□□ -0.81
RRP1-202ENST00000471909 RYR2Q92736 4967 aa9.97□□□□□ -0.81
RRP1-202ENST00000471909 C8orf87E5RJ46 101 aa9.97□□□□□ -0.81
RRP1-202ENST00000471909 KRTAP13-3Q3SY46 172 aa9.97□□□□□ -0.81
RRP1-202ENST00000471909 SMR3BP02814 79 aaPredicted RBP9.95□□□□□ -0.82
RRP1-202ENST00000471909 KMT2CQ8NEZ4 4911 aaKnown RBP9.94□□□□□ -0.82
RRP1-202ENST00000471909 ACYP2P14621 99 aa9.94□□□□□ -0.82
RRP1-202ENST00000471909 APOBP04114 4563 aaKnown RBP9.92□□□□□ -0.82
RRP1-202ENST00000471909 TYMSOSQ8TAI1 123 aa9.92□□□□□ -0.82
RRP1-202ENST00000471909 FAT1Q14517 4588 aa9.9□□□□□ -0.83
RRP1-202ENST00000471909 H3BS24 57 aa9.89□□□□□ -0.83
RRP1-202ENST00000471909 LINC00313P59037 77 aa9.86□□□□□ -0.83
RRP1-202ENST00000471909 DMAC1Q96GE9 116 aa9.86□□□□□ -0.83
RRP1-202ENST00000471909 KRTAP10-4P60372 401 aaPredicted RBP9.85□□□□□ -0.83
RRP1-202ENST00000471909 SPINK1P00995 79 aa9.84□□□□□ -0.83
RRP1-202ENST00000471909 FAM229AH3BQW9 127 aa9.81□□□□□ -0.84
RRP1-202ENST00000471909 LINC00304Q8N9R0 145 aa9.79□□□□□ -0.84
RRP1-202ENST00000471909 RETNLBQ9BQ08 111 aa9.79□□□□□ -0.84
RRP1-202ENST00000471909 A0A1B0GU69 56 aa9.78□□□□□ -0.84
RRP1-202ENST00000471909 KRTAP16-1A8MUX0 517 aa9.78□□□□□ -0.84
RRP1-202ENST00000471909 IGKV2-30P06310 120 aa9.75□□□□□ -0.85
RRP1-202ENST00000471909 RPS29P62273 56 aaKnown RBP9.74□□□□□ -0.85
RRP1-202ENST00000471909 PKHD1L1Q86WI1 4243 aa9.71□□□□□ -0.85
RRP1-202ENST00000471909 SPATA8Q6RVD6 105 aa9.68□□□□□ -0.86
RRP1-202ENST00000471909 PRAC1Q96KF2 57 aa9.66□□□□□ -0.86
RRP1-202ENST00000471909 RYR3Q15413 4870 aa9.65□□□□□ -0.86
RRP1-202ENST00000471909 LINC01554Q52M75 96 aa9.65□□□□□ -0.86
RRP1-202ENST00000471909 UQCR11O14957 56 aa9.64□□□□□ -0.87
RRP1-202ENST00000471909 MIR22HGQ0VDD5 57 aa9.64□□□□□ -0.87
RRP1-202ENST00000471909 IGKV2D-30A0A075B6S6 120 aa9.62□□□□□ -0.87
RRP1-202ENST00000471909 ADM2Q7Z4H4 148 aa9.6□□□□□ -0.87
RRP1-202ENST00000471909 HSPG2P98160 4391 aa9.59□□□□□ -0.87
RRP1-202ENST00000471909 LRP1Q07954 4544 aaKnown RBP9.52□□□□□ -0.89
RRP1-202ENST00000471909 Q5VSD8 79 aa9.52□□□□□ -0.89
RRP1-202ENST00000471909 C9orf92A6NGG3 77 aa9.5□□□□□ -0.89
RRP1-202ENST00000471909 TNXBP22105 4242 aa9.49□□□□□ -0.89
RRP1-202ENST00000471909 RYR1P21817 5038 aa9.48□□□□□ -0.89
RRP1-202ENST00000471909 Q8N1X5 172 aa9.47□□□□□ -0.89
RRP1-202ENST00000471909 FLG2Q5D862 2391 aaPredicted RBP9.47□□□□□ -0.89
RRP1-202ENST00000471909 KRTAP17-1Q9BYP8 105 aa9.46□□□□□ -0.9
RRP1-202ENST00000471909 KRTAP10-8P60410 259 aa9.45□□□□□ -0.9
RRP1-202ENST00000471909 C20orf166-AS1Q96NR2 134 aa9.44□□□□□ -0.9
RRP1-202ENST00000471909 A8MUU9 505 aa9.43□□□□□ -0.9
RRP1-202ENST00000471909 FAT3Q8TDW7 4589 aa9.41□□□□□ -0.9
RRP1-202ENST00000471909 KIAA1109Q2LD37 5005 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms