RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 NDUFB1O75438 58 aa10.18□□□□□ -0.78
HSPG2-208ENST00000471322 PRR15Q8IV56 129 aa10.18□□□□□ -0.78
HSPG2-208ENST00000471322 Q96NJ1 140 aa10.18□□□□□ -0.78
HSPG2-208ENST00000471322 TRAV7A0A075B6U4 112 aa10.17□□□□□ -0.78
HSPG2-208ENST00000471322 ASB16-AS1Q495Z4 193 aa10.16□□□□□ -0.78
HSPG2-208ENST00000471322 HCG22E2RYF7 251 aa10.15□□□□□ -0.78
HSPG2-208ENST00000471322 Q5XG85 94 aa10.15□□□□□ -0.78
HSPG2-208ENST00000471322 PRR26Q8N8Z3 221 aa10.15□□□□□ -0.78
HSPG2-208ENST00000471322 TYMSOSQ8TAI1 123 aa10.15□□□□□ -0.78
HSPG2-208ENST00000471322 CCDC179H3BU77 68 aa10.15□□□□□ -0.79
HSPG2-208ENST00000471322 C4orf48Q5BLP8 95 aa10.13□□□□□ -0.79
HSPG2-208ENST00000471322 KRTAP10-8P60410 259 aa10.12□□□□□ -0.79
HSPG2-208ENST00000471322 LIMD2Q9BT23 127 aa10.11□□□□□ -0.79
HSPG2-208ENST00000471322 HMCN2Q8NDA2 5059 aa10.09□□□□□ -0.79
HSPG2-208ENST00000471322 SPINK1P00995 79 aa10.08□□□□□ -0.8
HSPG2-208ENST00000471322 SPAG11AQ6PDA7 123 aa10.07□□□□□ -0.8
HSPG2-208ENST00000471322 OCR1Q9BZK8 76 aa10.07□□□□□ -0.8
HSPG2-208ENST00000471322 A0A1B0GVX0 72 aa10.06□□□□□ -0.8
HSPG2-208ENST00000471322 CASC2Q6XLA1 102 aa10.06□□□□□ -0.8
HSPG2-208ENST00000471322 WFDC13Q8IUB5 93 aa10.04□□□□□ -0.8
HSPG2-208ENST00000471322 RPS29P62273 56 aaKnown RBP10.03□□□□□ -0.8
HSPG2-208ENST00000471322 LINC00304Q8N9R0 145 aa10.03□□□□□ -0.8
HSPG2-208ENST00000471322 IGHV6-1A0A0B4J1U7 121 aa10.01□□□□□ -0.81
HSPG2-208ENST00000471322 MMP24-AS1A0A0U1RRL7 71 aa10.01□□□□□ -0.81
HSPG2-208ENST00000471322 C8orf17Q9NRJ1 99 aa10□□□□□ -0.81
HSPG2-208ENST00000471322 hDV103S1A0JD37 113 aa10□□□□□ -0.81
HSPG2-208ENST00000471322 C1orf195Q5TG92 126 aa10□□□□□ -0.81
HSPG2-208ENST00000471322 C20orf197Q8N268 126 aa9.97□□□□□ -0.81
HSPG2-208ENST00000471322 C8orf87E5RJ46 101 aa9.96□□□□□ -0.82
HSPG2-208ENST00000471322 C5orf47Q569G3 176 aa9.94□□□□□ -0.82
HSPG2-208ENST00000471322 KLKP1Q107X0 134 aa9.93□□□□□ -0.82
HSPG2-208ENST00000471322 TMEM254Q8TBM7 123 aa9.93□□□□□ -0.82
HSPG2-208ENST00000471322 TP53AIP1Q9HCN2 124 aa9.91□□□□□ -0.82
HSPG2-208ENST00000471322 MRPL34Q9BQ48 92 aaKnown RBP9.9□□□□□ -0.82
HSPG2-208ENST00000471322 LRP2P98164 4655 aa9.9□□□□□ -0.82
HSPG2-208ENST00000471322 LINC00313P59037 77 aa9.89□□□□□ -0.83
HSPG2-208ENST00000471322 NDUFC1O43677 76 aa9.88□□□□□ -0.83
HSPG2-208ENST00000471322 UBR4Q5T4S7 5183 aa9.87□□□□□ -0.83
HSPG2-208ENST00000471322 NOTCH2NLQ7Z3S9 236 aa9.87□□□□□ -0.83
HSPG2-208ENST00000471322 A0A0U1RQV1 116 aa9.86□□□□□ -0.83
HSPG2-208ENST00000471322 MP68P56378 58 aa9.86□□□□□ -0.83
HSPG2-208ENST00000471322 SNURFQ9Y675 71 aa9.86□□□□□ -0.83
HSPG2-208ENST00000471322 CYSTM1Q9H1C7 97 aa9.85□□□□□ -0.83
HSPG2-208ENST00000471322 LPAP08519 4548 aa9.84□□□□□ -0.83
HSPG2-208ENST00000471322 H3BPC8 53 aa9.83□□□□□ -0.84
HSPG2-208ENST00000471322 TMEM258P61165 79 aa9.82□□□□□ -0.84
HSPG2-208ENST00000471322 NDUFS5O43920 106 aa9.82□□□□□ -0.84
HSPG2-208ENST00000471322 H0Y9P7 68 aa9.8□□□□□ -0.84
HSPG2-208ENST00000471322 H7BZZ5 65 aa9.79□□□□□ -0.84
HSPG2-208ENST00000471322 TRAV22A0A0B4J277 110 aa9.78□□□□□ -0.84
HSPG2-208ENST00000471322 ZCCHC13Q8WW36 166 aaKnown RBP9.77□□□□□ -0.85
HSPG2-208ENST00000471322 RETNLBQ9BQ08 111 aa9.77□□□□□ -0.85
HSPG2-208ENST00000471322 PRR4Q16378 134 aa9.76□□□□□ -0.85
HSPG2-208ENST00000471322 Q8N9P0 234 aaPredicted RBP9.74□□□□□ -0.85
HSPG2-208ENST00000471322 LINC00208Q96KT6 92 aa9.74□□□□□ -0.85
HSPG2-208ENST00000471322 KRTAP16-1A8MUX0 517 aa9.72□□□□□ -0.85
HSPG2-208ENST00000471322 C1orf64Q8NEQ6 169 aa9.71□□□□□ -0.86
HSPG2-208ENST00000471322 FAM236DA0A1B0GTK5 79 aa9.68□□□□□ -0.86
HSPG2-208ENST00000471322 FAM236CP0DP71 79 aa9.68□□□□□ -0.86
HSPG2-208ENST00000471322 ATP5EP56381 51 aaPredicted RBP9.68□□□□□ -0.86
HSPG2-208ENST00000471322 RNF213Q63HN8 5207 aa9.64□□□□□ -0.87
HSPG2-208ENST00000471322 FP248Q71RG6 208 aaPredicted RBP9.63□□□□□ -0.87
HSPG2-208ENST00000471322 LOC101927531A0A1B0GV80 90 aa9.62□□□□□ -0.87
HSPG2-208ENST00000471322 KRTAP13-3Q3SY46 172 aa9.62□□□□□ -0.87
HSPG2-208ENST00000471322 Q5W150 140 aa9.62□□□□□ -0.87
HSPG2-208ENST00000471322 RPS28P62857 69 aaKnown RBP9.59□□□□□ -0.87
HSPG2-208ENST00000471322 IGLV7-46A0A075B6I9 117 aa9.58□□□□□ -0.88
HSPG2-208ENST00000471322 SPANXA2-OT1Q8N9U9 137 aa9.56□□□□□ -0.88
HSPG2-208ENST00000471322 C9orf92A6NGG3 77 aa9.55□□□□□ -0.88
HSPG2-208ENST00000471322 C20orf166-AS1Q96NR2 134 aa9.54□□□□□ -0.88
HSPG2-208ENST00000471322 A8MUU9 505 aa9.53□□□□□ -0.88
HSPG2-208ENST00000471322 SERP1Q9Y6X1 66 aa9.53□□□□□ -0.88
HSPG2-208ENST00000471322 CYP4F30PQ9H0H9 118 aa9.52□□□□□ -0.89
HSPG2-208ENST00000471322 PCOTHQ58A44 107 aa9.49□□□□□ -0.89
HSPG2-208ENST00000471322 MUC2Q02817 5179 aa9.49□□□□□ -0.89
HSPG2-208ENST00000471322 IGKV2-30P06310 120 aa9.49□□□□□ -0.89
HSPG2-208ENST00000471322 TPRXLQ17RH7 258 aa9.47□□□□□ -0.89
HSPG2-208ENST00000471322 Q75L30 129 aa9.45□□□□□ -0.9
HSPG2-208ENST00000471322 IGKV2D-30A0A075B6S6 120 aa9.39□□□□□ -0.91
HSPG2-208ENST00000471322 C7orf65Q6ZTY9 151 aa9.38□□□□□ -0.91
HSPG2-208ENST00000471322 HRES1P13985 223 aa9.34□□□□□ -0.91
HSPG2-208ENST00000471322 ATP11AUNQ6ZP68 121 aa9.33□□□□□ -0.92
HSPG2-208ENST00000471322 RPL37P61927 97 aaKnown RBP9.31□□□□□ -0.92
HSPG2-208ENST00000471322 XP32Q5T750 250 aa9.31□□□□□ -0.92
HSPG2-208ENST00000471322 MUC17Q685J3 4493 aa9.3□□□□□ -0.92
HSPG2-208ENST00000471322 SMIM26A0A096LP01 95 aa9.3□□□□□ -0.92
HSPG2-208ENST00000471322 ACYP2P14621 99 aa9.25□□□□□ -0.93
HSPG2-208ENST00000471322 DMAC1Q96GE9 116 aa9.25□□□□□ -0.93
HSPG2-208ENST00000471322 SPINK7P58062 85 aa9.24□□□□□ -0.93
HSPG2-208ENST00000471322 COA5Q86WW8 74 aa9.23□□□□□ -0.93
HSPG2-208ENST00000471322 A8MUN3 132 aa9.17□□□□□ -0.94
HSPG2-208ENST00000471322 SEC61BP60468 96 aaKnown RBP9.16□□□□□ -0.94
HSPG2-208ENST00000471322 FAT4Q6V0I7 4981 aa9.14□□□□□ -0.95
HSPG2-208ENST00000471322 KRTAP4-1Q9BYQ7 146 aa9.13□□□□□ -0.95
HSPG2-208ENST00000471322 C4orf26Q17RF5 130 aa9.13□□□□□ -0.95
HSPG2-208ENST00000471322 CHKB-CPT1BH3BT56 60 aa9.1□□□□□ -0.95
HSPG2-208ENST00000471322 V9GYY9 64 aa9.1□□□□□ -0.95
HSPG2-208ENST00000471322 Q1T7F1 81 aa9.09□□□□□ -0.95
HSPG2-208ENST00000471322 MPLKIPQ8TAP9 179 aa9.07□□□□□ -0.96
HSPG2-208ENST00000471322 COX6B2Q6YFQ2 88 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms