RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 AKAIN1P0CW23 69 aa-3.38□□□□□ -2.95
SSB-208ENST00000468600 NRXN1Q9ULB1 1477 aa-3.39□□□□□ -2.95
SSB-208ENST00000468600 CC2D2AQ9P2K1 1620 aa-3.39□□□□□ -2.95
SSB-208ENST00000468600 NDUFA4O00483 81 aa-3.39□□□□□ -2.95
SSB-208ENST00000468600 NCBP2-AS2Q69YL0 99 aa-3.39□□□□□ -2.95
SSB-208ENST00000468600 SZT2Q5T011 3432 aa-3.39□□□□□ -2.95
SSB-208ENST00000468600 LRRIQ1Q96JM4 1722 aa-3.39□□□□□ -2.95
SSB-208ENST00000468600 ROCK2O75116 1388 aaKnown RBP-3.39□□□□□ -2.95
SSB-208ENST00000468600 ARHGAP5Q13017 1502 aa-3.39□□□□□ -2.95
SSB-208ENST00000468600 GNG14A0A1W2PPG7 69 aa-3.4□□□□□ -2.95
SSB-208ENST00000468600 SELENOWP63302 87 aa-3.4□□□□□ -2.95
SSB-208ENST00000468600 THOC2Q8NI27 1593 aaKnown RBP-3.4□□□□□ -2.95
SSB-208ENST00000468600 LTN1O94822 1766 aa-3.4□□□□□ -2.95
SSB-208ENST00000468600 MED14O60244 1454 aa-3.41□□□□□ -2.95
SSB-208ENST00000468600 SNAPC5O75971 98 aa-3.41□□□□□ -2.96
SSB-208ENST00000468600 CRIP1P50238 77 aa-3.41□□□□□ -2.96
SSB-208ENST00000468600 PIK3C2BO00750 1634 aa-3.41□□□□□ -2.96
SSB-208ENST00000468600 EP400Q96L91 3159 aa-3.41□□□□□ -2.96
SSB-208ENST00000468600 ITSN1Q15811 1721 aa-3.41□□□□□ -2.96
SSB-208ENST00000468600 GNG7O60262 68 aa-3.42□□□□□ -2.96
SSB-208ENST00000468600 DPY30Q9C005 99 aa-3.42□□□□□ -2.96
SSB-208ENST00000468600 KIF21BO75037 1637 aa-3.42□□□□□ -2.96
SSB-208ENST00000468600 GNGT2O14610 69 aa-3.43□□□□□ -2.96
SSB-208ENST00000468600 PYDC1Q8WXC3 89 aa-3.43□□□□□ -2.96
SSB-208ENST00000468600 TTTY10Q9BZA0 68 aa-3.43□□□□□ -2.96
SSB-208ENST00000468600 LINC00470Q9BZP3 86 aa-3.43□□□□□ -2.96
SSB-208ENST00000468600 NCOA2Q15596 1464 aa-3.43□□□□□ -2.96
SSB-208ENST00000468600 CROCC2H7BZ55 1655 aa-3.43□□□□□ -2.96
SSB-208ENST00000468600 UQCRHLA0A096LP55 91 aa-3.44□□□□□ -2.96
SSB-208ENST00000468600 LINC00032P0C843 101 aa-3.44□□□□□ -2.96
SSB-208ENST00000468600 SARNPP82979 210 aaKnown RBP-3.44□□□□□ -2.96
SSB-208ENST00000468600 DNAH14Q0VDD8 3507 aa-3.45□□□□□ -2.96
SSB-208ENST00000468600 UMAD1C9J7I0 102 aa-3.45□□□□□ -2.96
SSB-208ENST00000468600 S100A8P05109 93 aa-3.45□□□□□ -2.96
SSB-208ENST00000468600 PPLO60437 1756 aa-3.46□□□□□ -2.96
SSB-208ENST00000468600 DIP2BQ9P265 1576 aa-3.47□□□□□ -2.97
SSB-208ENST00000468600 HMGN2P05204 90 aaKnown RBP-3.48□□□□□ -2.97
SSB-208ENST00000468600 COL5A1-AS1Q5SY13 56 aa-3.48□□□□□ -2.97
SSB-208ENST00000468600 ABRACLQ9P1F3 81 aa-3.48□□□□□ -2.97
SSB-208ENST00000468600 ATOX1O00244 68 aa-3.49□□□□□ -2.97
SSB-208ENST00000468600 PMCHL2Q9BQD1 86 aa-3.49□□□□□ -2.97
SSB-208ENST00000468600 IER3IP1Q9Y5U9 82 aa-3.49□□□□□ -2.97
SSB-208ENST00000468600 SMIM11AP58511 58 aa-3.5□□□□□ -2.97
SSB-208ENST00000468600 MYOM2P54296 1465 aa-3.5□□□□□ -2.97
SSB-208ENST00000468600 UBL5Q9BZL1 73 aa-3.51□□□□□ -2.97
SSB-208ENST00000468600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-3.51□□□□□ -2.97
SSB-208ENST00000468600 NRAPQ86VF7 1730 aa-3.52□□□□□ -2.97
SSB-208ENST00000468600 S100A1P23297 94 aa-3.52□□□□□ -2.97
SSB-208ENST00000468600 FAUP35544 74 aaKnown RBP-3.52□□□□□ -2.97
SSB-208ENST00000468600 MAP3K4Q9Y6R4 1608 aa-3.52□□□□□ -2.97
SSB-208ENST00000468600 ZFYVE16Q7Z3T8 1539 aa-3.53□□□□□ -2.97
SSB-208ENST00000468600 FAM107BQ9H098 131 aa-3.53□□□□□ -2.97
SSB-208ENST00000468600 PREX2Q70Z35 1606 aa-3.53□□□□□ -2.97
SSB-208ENST00000468600 MKI67P46013 3256 aaKnown RBP-3.53□□□□□ -2.97
SSB-208ENST00000468600 EEA1Q15075 1411 aa-3.53□□□□□ -2.98
SSB-208ENST00000468600 FOCADQ5VW36 1801 aa-3.54□□□□□ -2.98
SSB-208ENST00000468600 NEXMIFQ5QGS0 1516 aa-3.54□□□□□ -2.98
SSB-208ENST00000468600 PEA15Q15121 130 aa-3.54□□□□□ -2.98
SSB-208ENST00000468600 KAAG1Q9UBP8 84 aa-3.54□□□□□ -2.98
SSB-208ENST00000468600 CCDC88BA6NC98 1476 aa-3.55□□□□□ -2.98
SSB-208ENST00000468600 UBR1Q8IWV7 1749 aa-3.56□□□□□ -2.98
SSB-208ENST00000468600 HMGA1P17096 107 aaKnown RBP-3.56□□□□□ -2.98
SSB-208ENST00000468600 PPP3R1P63098 170 aa-3.56□□□□□ -2.98
SSB-208ENST00000468600 KCNQ1DNQ9H478 68 aa-3.56□□□□□ -2.98
SSB-208ENST00000468600 HFM1A2PYH4 1435 aa-3.56□□□□□ -2.98
SSB-208ENST00000468600 ASXL1Q8IXJ9 1541 aa-3.56□□□□□ -2.98
SSB-208ENST00000468600 SPHKAPQ2M3C7 1700 aa-3.56□□□□□ -2.98
SSB-208ENST00000468600 ARFGEF2Q9Y6D5 1785 aa-3.56□□□□□ -2.98
SSB-208ENST00000468600 CFAP47Q6ZTR5 3102 aa-3.57□□□□□ -2.98
SSB-208ENST00000468600 MYMXA0A1B0GTQ4 84 aa-3.57□□□□□ -2.98
SSB-208ENST00000468600 RBP2P50120 134 aa-3.57□□□□□ -2.98
SSB-208ENST00000468600 NREPQ16612 68 aa-3.57□□□□□ -2.98
SSB-208ENST00000468600 RICTORQ6R327 1708 aa-3.58□□□□□ -2.98
SSB-208ENST00000468600 KIF14Q15058 1648 aa-3.58□□□□□ -2.98
SSB-208ENST00000468600 CLASP1Q7Z460 1538 aa-3.58□□□□□ -2.98
SSB-208ENST00000468600 NRKQ7Z2Y5 1582 aa-3.59□□□□□ -2.98
SSB-208ENST00000468600 ARHGAP35Q9NRY4 1499 aa-3.59□□□□□ -2.98
SSB-208ENST00000468600 CEBPZOSA8MTT3 80 aa-3.59□□□□□ -2.98
SSB-208ENST00000468600 TJP1Q07157 1748 aa-3.59□□□□□ -2.98
SSB-208ENST00000468600 ABCA3Q99758 1704 aa-3.59□□□□□ -2.98
SSB-208ENST00000468600 CLTCQ00610 1675 aaKnown RBP-3.59□□□□□ -2.98
SSB-208ENST00000468600 URB2Q14146 1524 aaKnown RBP-3.6□□□□□ -2.98
SSB-208ENST00000468600 GNG4P50150 75 aa-3.6□□□□□ -2.99
SSB-208ENST00000468600 UACAQ9BZF9 1416 aa-3.61□□□□□ -2.99
SSB-208ENST00000468600 ETDCA0A1B0GVM5 59 aa-3.61□□□□□ -2.99
SSB-208ENST00000468600 C20orf202A1L168 122 aa-3.61□□□□□ -2.99
SSB-208ENST00000468600 INO80Q9ULG1 1556 aaPredicted RBP-3.61□□□□□ -2.99
SSB-208ENST00000468600 POLR2KP53803 58 aaKnown RBP-3.62□□□□□ -2.99
SSB-208ENST00000468600 FANCAO15360 1455 aa-3.62□□□□□ -2.99
SSB-208ENST00000468600 EPRSP07814 1512 aaKnown RBP-3.63□□□□□ -2.99
SSB-208ENST00000468600 GTF2H5Q6ZYL4 71 aa-3.63□□□□□ -2.99
SSB-208ENST00000468600 PZPP20742 1482 aa-3.63□□□□□ -2.99
SSB-208ENST00000468600 TMEM203Q969S6 136 aa-3.64□□□□□ -2.99
SSB-208ENST00000468600 RALGAPBQ86X10 1494 aa-3.66□□□□□ -2.99
SSB-208ENST00000468600 RRBP1Q9P2E9 1410 aaKnown RBP-3.66□□□□□ -3
SSB-208ENST00000468600 SMIM27A0A1W2PRY6 76 aa-3.66□□□□□ -3
SSB-208ENST00000468600 RABAC1Q9UI14 185 aa-3.66□□□□□ -3
SSB-208ENST00000468600 FAM208AQ9UK61 1670 aaKnown RBP-3.67□□□□□ -3
SSB-208ENST00000468600 MYO5CQ9NQX4 1742 aa-3.67□□□□□ -3
SSB-208ENST00000468600 USP34Q70CQ2 3546 aa-3.69□□□□□ -3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms