RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 FCGBPQ9Y6R7 5405 aaPredicted RBP6.71□□□□□ -1.34
PTPN7-207ENST00000468385 TRBV7-7A0A0K0K1E9 115 aa6.7□□□□□ -1.34
PTPN7-207ENST00000468385 A0A1B0GX51 115 aa6.7□□□□□ -1.34
PTPN7-207ENST00000468385 F8WEM9 126 aa6.69□□□□□ -1.34
PTPN7-207ENST00000468385 Q6JHZ5 121 aa6.67□□□□□ -1.34
PTPN7-207ENST00000468385 IGFL1Q6UW32 110 aa6.67□□□□□ -1.34
PTPN7-207ENST00000468385 LINC00575Q6W349 94 aa6.66□□□□□ -1.34
PTPN7-207ENST00000468385 ORMDL1Q9P0S3 153 aa6.66□□□□□ -1.34
PTPN7-207ENST00000468385 A0A0A0MQY5 61 aa6.65□□□□□ -1.34
PTPN7-207ENST00000468385 hADV29S1A0JD25 119 aa6.65□□□□□ -1.34
PTPN7-207ENST00000468385 Q96NJ1 140 aa6.64□□□□□ -1.35
PTPN7-207ENST00000468385 H3BQ85 93 aa6.63□□□□□ -1.35
PTPN7-207ENST00000468385 TMEM256-PLSCR3K7ERE1 68 aa6.63□□□□□ -1.35
PTPN7-207ENST00000468385 MT2AP02795 61 aa6.63□□□□□ -1.35
PTPN7-207ENST00000468385 Q6ZQY7 126 aa6.63□□□□□ -1.35
PTPN7-207ENST00000468385 KRTAP19-1Q8IUB9 90 aa6.63□□□□□ -1.35
PTPN7-207ENST00000468385 C20orf166-AS1Q96NR2 134 aa6.63□□□□□ -1.35
PTPN7-207ENST00000468385 A8MUU9 505 aa6.61□□□□□ -1.35
PTPN7-207ENST00000468385 SIGMAR1Q99720 223 aa6.61□□□□□ -1.35
PTPN7-207ENST00000468385 MT1FP04733 61 aa6.59□□□□□ -1.35
PTPN7-207ENST00000468385 JMJD7-PLA2G4BH0Y9G9 81 aa6.58□□□□□ -1.36
PTPN7-207ENST00000468385 ACYP1P07311 99 aa6.58□□□□□ -1.36
PTPN7-207ENST00000468385 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.58□□□□□ -1.36
PTPN7-207ENST00000468385 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
PTPN7-207ENST00000468385 FAM240AA0A1B0GVK7 77 aa6.55□□□□□ -1.36
PTPN7-207ENST00000468385 C14orf132Q9NPU4 83 aa6.54□□□□□ -1.36
PTPN7-207ENST00000468385 MACF1Q9UPN3 7388 aaKnown RBP6.53□□□□□ -1.36
PTPN7-207ENST00000468385 KRTAP16-1A8MUX0 517 aa6.53□□□□□ -1.36
PTPN7-207ENST00000468385 RBM3P98179 157 aaKnown RBP6.53□□□□□ -1.36
PTPN7-207ENST00000468385 SS18L2Q9UHA2 77 aa6.53□□□□□ -1.36
PTPN7-207ENST00000468385 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
PTPN7-207ENST00000468385 SYNE2Q8WXH0 6885 aaKnown RBP6.52□□□□□ -1.37
PTPN7-207ENST00000468385 FAM236DA0A1B0GTK5 79 aa6.51□□□□□ -1.37
PTPN7-207ENST00000468385 A0A1B0GV72 72 aa6.51□□□□□ -1.37
PTPN7-207ENST00000468385 CCKP06307 115 aa6.51□□□□□ -1.37
PTPN7-207ENST00000468385 FAM236CP0DP71 79 aa6.51□□□□□ -1.37
PTPN7-207ENST00000468385 DSCR10P59022 87 aa6.51□□□□□ -1.37
PTPN7-207ENST00000468385 KRTAP10-10P60014 251 aa6.51□□□□□ -1.37
PTPN7-207ENST00000468385 NDUFV3P56181 108 aaKnown RBP6.5□□□□□ -1.37
PTPN7-207ENST00000468385 MPLKIPQ8TAP9 179 aa6.5□□□□□ -1.37
PTPN7-207ENST00000468385 DSCR8Q96T75 97 aa6.5□□□□□ -1.37
PTPN7-207ENST00000468385 PDE6GP18545 87 aa6.49□□□□□ -1.37
PTPN7-207ENST00000468385 MT-ATP8P03928 68 aa6.48□□□□□ -1.37
PTPN7-207ENST00000468385 HRES1P13985 223 aa6.48□□□□□ -1.37
PTPN7-207ENST00000468385 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
PTPN7-207ENST00000468385 A0A087WSZ3 146 aa6.47□□□□□ -1.37
PTPN7-207ENST00000468385 SCGB1A1P11684 91 aa6.47□□□□□ -1.37
PTPN7-207ENST00000468385 LOC110117498A0A087WWA1 95 aa6.46□□□□□ -1.38
PTPN7-207ENST00000468385 LINC00643Q86TS7 51 aa6.46□□□□□ -1.38
PTPN7-207ENST00000468385 RBM12B-AS1Q9P1G2 102 aa6.45□□□□□ -1.38
PTPN7-207ENST00000468385 Q6ZQT0 140 aa6.44□□□□□ -1.38
PTPN7-207ENST00000468385 KRTAP19-6Q3LI70 58 aa6.43□□□□□ -1.38
PTPN7-207ENST00000468385 LINC00846Q9NV44 126 aa6.43□□□□□ -1.38
PTPN7-207ENST00000468385 LINC00313P59037 77 aa6.42□□□□□ -1.38
PTPN7-207ENST00000468385 NOTCH2NLQ7Z3S9 236 aa6.41□□□□□ -1.38
PTPN7-207ENST00000468385 TRBV7-4A0A0J9YYF1 115 aa6.4□□□□□ -1.38
PTPN7-207ENST00000468385 UBL5Q9BZL1 73 aa6.4□□□□□ -1.38
PTPN7-207ENST00000468385 IMUPQ9GZP8 106 aa6.4□□□□□ -1.38
PTPN7-207ENST00000468385 A0A1W2PNM2 257 aa6.39□□□□□ -1.39
PTPN7-207ENST00000468385 IGKV4-1P06312 121 aa6.37□□□□□ -1.39
PTPN7-207ENST00000468385 IGKV3D-7A0A0C4DH55 119 aa6.36□□□□□ -1.39
PTPN7-207ENST00000468385 A0A1B0GW54 56 aa6.34□□□□□ -1.39
PTPN7-207ENST00000468385 ATP5EP2Q5VTU8 51 aa6.33□□□□□ -1.4
PTPN7-207ENST00000468385 NREPQ16612 68 aa6.32□□□□□ -1.4
PTPN7-207ENST00000468385 DEFB116Q30KQ4 102 aa6.32□□□□□ -1.4
PTPN7-207ENST00000468385 KRTAP6-3Q3LI67 103 aa6.32□□□□□ -1.4
PTPN7-207ENST00000468385 Q6ZVQ6 151 aa6.32□□□□□ -1.4
PTPN7-207ENST00000468385 LINC00472Q9H8W2 130 aa6.31□□□□□ -1.4
PTPN7-207ENST00000468385 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
PTPN7-207ENST00000468385 HIST1H4AP62805 103 aaKnown RBP6.3□□□□□ -1.4
PTPN7-207ENST00000468385 ANAPC13Q9BS18 74 aa6.29□□□□□ -1.4
PTPN7-207ENST00000468385 CXCL6P80162 114 aa6.28□□□□□ -1.4
PTPN7-207ENST00000468385 FAM236AA0A1B0GUQ0 79 aa6.27□□□□□ -1.41
PTPN7-207ENST00000468385 FAM236BA0A1B0GV22 79 aa6.27□□□□□ -1.41
PTPN7-207ENST00000468385 A8MWP4 228 aa6.27□□□□□ -1.41
PTPN7-207ENST00000468385 SPINK7P58062 85 aa6.26□□□□□ -1.41
PTPN7-207ENST00000468385 ZCCHC13Q8WW36 166 aaKnown RBP6.25□□□□□ -1.41
PTPN7-207ENST00000468385 C8orf87E5RJ46 101 aa6.24□□□□□ -1.41
PTPN7-207ENST00000468385 BPY2O14599 106 aa6.24□□□□□ -1.41
PTPN7-207ENST00000468385 Q8N9P0 234 aaPredicted RBP6.24□□□□□ -1.41
PTPN7-207ENST00000468385 A0A087WVE0 104 aa6.23□□□□□ -1.41
PTPN7-207ENST00000468385 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
PTPN7-207ENST00000468385 ATOX1O00244 68 aa6.22□□□□□ -1.41
PTPN7-207ENST00000468385 WFDC13Q8IUB5 93 aa6.18□□□□□ -1.42
PTPN7-207ENST00000468385 NEBP20929 6669 aa6.16□□□□□ -1.42
PTPN7-207ENST00000468385 MUC12Q9UKN1 5478 aa6.15□□□□□ -1.42
PTPN7-207ENST00000468385 SMIM20Q8N5G0 67 aa6.14□□□□□ -1.43
PTPN7-207ENST00000468385 Q8N9L7 120 aa6.14□□□□□ -1.43
PTPN7-207ENST00000468385 CCDC179H3BU77 68 aa6.13□□□□□ -1.43
PTPN7-207ENST00000468385 COX7CP15954 63 aa6.13□□□□□ -1.43
PTPN7-207ENST00000468385 SERP2Q8N6R1 65 aa6.13□□□□□ -1.43
PTPN7-207ENST00000468385 UQCRQO14949 82 aa6.12□□□□□ -1.43
PTPN7-207ENST00000468385 J3KT08 172 aa6.11□□□□□ -1.43
PTPN7-207ENST00000468385 TRAV7A0A075B6U4 112 aa6.09□□□□□ -1.43
PTPN7-207ENST00000468385 K7EQZ3 153 aa6.08□□□□□ -1.44
PTPN7-207ENST00000468385 NDUFB1O75438 58 aa6.08□□□□□ -1.44
PTPN7-207ENST00000468385 C8orf17Q9NRJ1 99 aa6.07□□□□□ -1.44
PTPN7-207ENST00000468385 H1FX-AS1Q4G0G2 97 aa6.06□□□□□ -1.44
PTPN7-207ENST00000468385 HCG22E2RYF7 251 aa6.05□□□□□ -1.44
PTPN7-207ENST00000468385 PRR15Q8IV56 129 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms