RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-216ENST00000467134 HCG22E2RYF7 251 aa6.26□□□□□ -1.41
MUC1-216ENST00000467134 BIRC6Q9NR09 4857 aa6.26□□□□□ -1.41
MUC1-216ENST00000467134 KRTAP29-1A8MX34 341 aaPredicted RBP6.25□□□□□ -1.41
MUC1-216ENST00000467134 MT1HL1P0DM35 61 aa6.24□□□□□ -1.41
MUC1-216ENST00000467134 MMP24-AS1A0A0U1RRL7 71 aa6.23□□□□□ -1.41
MUC1-216ENST00000467134 C8orf17Q9NRJ1 99 aa6.23□□□□□ -1.41
MUC1-216ENST00000467134 FLG2Q5D862 2391 aaPredicted RBP6.21□□□□□ -1.42
MUC1-216ENST00000467134 CASC2Q6XLA1 102 aa6.21□□□□□ -1.42
MUC1-216ENST00000467134 TMEM254Q8TBM7 123 aa6.21□□□□□ -1.42
MUC1-216ENST00000467134 ANAPC13Q9BS18 74 aa6.21□□□□□ -1.42
MUC1-216ENST00000467134 FP248Q71RG6 208 aaPredicted RBP6.2□□□□□ -1.42
MUC1-216ENST00000467134 TRAV7A0A075B6U4 112 aa6.19□□□□□ -1.42
MUC1-216ENST00000467134 IGHV6-1A0A0B4J1U7 121 aa6.19□□□□□ -1.42
MUC1-216ENST00000467134 hDV103S1A0JD37 113 aa6.19□□□□□ -1.42
MUC1-216ENST00000467134 SERP2Q8N6R1 65 aa6.19□□□□□ -1.42
MUC1-216ENST00000467134 KRTAP4-5Q9BYR2 181 aa6.19□□□□□ -1.42
MUC1-216ENST00000467134 HERC2O95714 4834 aa6.18□□□□□ -1.42
MUC1-216ENST00000467134 OCR1Q9BZK8 76 aa6.18□□□□□ -1.42
MUC1-216ENST00000467134 FAT3Q8TDW7 4589 aa6.18□□□□□ -1.42
MUC1-216ENST00000467134 LINC00313P59037 77 aa6.17□□□□□ -1.42
MUC1-216ENST00000467134 PCP4P48539 62 aa6.16□□□□□ -1.42
MUC1-216ENST00000467134 WFDC13Q8IUB5 93 aa6.16□□□□□ -1.42
MUC1-216ENST00000467134 MRPL34Q9BQ48 92 aaKnown RBP6.16□□□□□ -1.42
MUC1-216ENST00000467134 TP53AIP1Q9HCN2 124 aa6.15□□□□□ -1.42
MUC1-216ENST00000467134 UQCRQO14949 82 aa6.14□□□□□ -1.43
MUC1-216ENST00000467134 COX7CP15954 63 aa6.14□□□□□ -1.43
MUC1-216ENST00000467134 KRTAP16-1A8MUX0 517 aa6.13□□□□□ -1.43
MUC1-216ENST00000467134 NOTCH2NLQ7Z3S9 236 aa6.13□□□□□ -1.43
MUC1-216ENST00000467134 Q8N9P0 234 aaPredicted RBP6.13□□□□□ -1.43
MUC1-216ENST00000467134 LRP1Q07954 4544 aaKnown RBP6.13□□□□□ -1.43
MUC1-216ENST00000467134 TNXBP22105 4242 aa6.12□□□□□ -1.43
MUC1-216ENST00000467134 J3QL48 77 aa6.11□□□□□ -1.43
MUC1-216ENST00000467134 C5orf47Q569G3 176 aa6.1□□□□□ -1.43
MUC1-216ENST00000467134 H3BPC8 53 aa6.08□□□□□ -1.44
MUC1-216ENST00000467134 RETNLBQ9BQ08 111 aa6.07□□□□□ -1.44
MUC1-216ENST00000467134 MYCBP2O75592 4640 aa6.05□□□□□ -1.44
MUC1-216ENST00000467134 DMBT1Q9UGM3 2413 aaPredicted RBP6.05□□□□□ -1.44
MUC1-216ENST00000467134 IGLV7-46A0A075B6I9 117 aa6.05□□□□□ -1.44
MUC1-216ENST00000467134 KLKP1Q107X0 134 aa6.05□□□□□ -1.44
MUC1-216ENST00000467134 C20orf166-AS1Q96NR2 134 aa6.05□□□□□ -1.44
MUC1-216ENST00000467134 TRAV22A0A0B4J277 110 aa6.04□□□□□ -1.44
MUC1-216ENST00000467134 A8MUU9 505 aa6.04□□□□□ -1.44
MUC1-216ENST00000467134 MP68P56378 58 aa6.04□□□□□ -1.44
MUC1-216ENST00000467134 NDUFS5O43920 106 aa6.03□□□□□ -1.44
MUC1-216ENST00000467134 KRTAP13-3Q3SY46 172 aa6.03□□□□□ -1.44
MUC1-216ENST00000467134 ABCA13Q86UQ4 5058 aa6.02□□□□□ -1.45
MUC1-216ENST00000467134 A0A0U1RQV1 116 aa6.02□□□□□ -1.45
MUC1-216ENST00000467134 CCDC179H3BU77 68 aa6.02□□□□□ -1.45
MUC1-216ENST00000467134 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
MUC1-216ENST00000467134 H0Y9P7 68 aa6.01□□□□□ -1.45
MUC1-216ENST00000467134 NDUFC1O43677 76 aa6.01□□□□□ -1.45
MUC1-216ENST00000467134 Q75L30 129 aa6.01□□□□□ -1.45
MUC1-216ENST00000467134 ZCCHC13Q8WW36 166 aaKnown RBP6.01□□□□□ -1.45
MUC1-216ENST00000467134 C20orf197Q8N268 126 aa6□□□□□ -1.45
MUC1-216ENST00000467134 C9orf92A6NGG3 77 aa5.98□□□□□ -1.45
MUC1-216ENST00000467134 LOC101927531A0A1B0GV80 90 aa5.97□□□□□ -1.45
MUC1-216ENST00000467134 LCE2BO14633 110 aa5.97□□□□□ -1.45
MUC1-216ENST00000467134 PRR4Q16378 134 aa5.97□□□□□ -1.45
MUC1-216ENST00000467134 Q5W150 140 aa5.96□□□□□ -1.46
MUC1-216ENST00000467134 XP32Q5T750 250 aa5.95□□□□□ -1.46
MUC1-216ENST00000467134 LINC00208Q96KT6 92 aa5.95□□□□□ -1.46
MUC1-216ENST00000467134 RPL37P61927 97 aaKnown RBP5.94□□□□□ -1.46
MUC1-216ENST00000467134 C1orf64Q8NEQ6 169 aa5.94□□□□□ -1.46
MUC1-216ENST00000467134 SNURFQ9Y675 71 aa5.93□□□□□ -1.46
MUC1-216ENST00000467134 H7BZZ5 65 aa5.92□□□□□ -1.46
MUC1-216ENST00000467134 IGKV2-30P06310 120 aa5.91□□□□□ -1.46
MUC1-216ENST00000467134 TMEM258P61165 79 aa5.91□□□□□ -1.46
MUC1-216ENST00000467134 CYSTM1Q9H1C7 97 aa5.9□□□□□ -1.46
MUC1-216ENST00000467134 ATP5EP56381 51 aaPredicted RBP5.89□□□□□ -1.47
MUC1-216ENST00000467134 CYP4F30PQ9H0H9 118 aa5.89□□□□□ -1.47
MUC1-216ENST00000467134 ATP11AUNQ6ZP68 121 aa5.88□□□□□ -1.47
MUC1-216ENST00000467134 SPANXA2-OT1Q8N9U9 137 aa5.88□□□□□ -1.47
MUC1-216ENST00000467134 C7orf65Q6ZTY9 151 aa5.87□□□□□ -1.47
MUC1-216ENST00000467134 PCLOQ9Y6V0 5065 aa5.82□□□□□ -1.48
MUC1-216ENST00000467134 FAM236DA0A1B0GTK5 79 aa5.82□□□□□ -1.48
MUC1-216ENST00000467134 FAM236CP0DP71 79 aa5.82□□□□□ -1.48
MUC1-216ENST00000467134 IGKV2D-30A0A075B6S6 120 aa5.81□□□□□ -1.48
MUC1-216ENST00000467134 SEC61BP60468 96 aaKnown RBP5.8□□□□□ -1.48
MUC1-216ENST00000467134 SPINK7P58062 85 aa5.79□□□□□ -1.48
MUC1-216ENST00000467134 PCOTHQ58A44 107 aa5.78□□□□□ -1.48
MUC1-216ENST00000467134 HRES1P13985 223 aa5.76□□□□□ -1.49
MUC1-216ENST00000467134 A8MUN3 132 aa5.74□□□□□ -1.49
MUC1-216ENST00000467134 RPS28P62857 69 aaKnown RBP5.73□□□□□ -1.49
MUC1-216ENST00000467134 DMAC1Q96GE9 116 aa5.73□□□□□ -1.49
MUC1-216ENST00000467134 SERP1Q9Y6X1 66 aa5.72□□□□□ -1.49
MUC1-216ENST00000467134 LRP2P98164 4655 aa5.68□□□□□ -1.5
MUC1-216ENST00000467134 ACYP2P14621 99 aa5.68□□□□□ -1.5
MUC1-216ENST00000467134 COX6B2Q6YFQ2 88 aa5.68□□□□□ -1.5
MUC1-216ENST00000467134 MPLKIPQ8TAP9 179 aa5.67□□□□□ -1.5
MUC1-216ENST00000467134 HMCN2Q8NDA2 5059 aa5.67□□□□□ -1.5
MUC1-216ENST00000467134 C4orf26Q17RF5 130 aa5.66□□□□□ -1.5
MUC1-216ENST00000467134 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
MUC1-216ENST00000467134 LPAP08519 4548 aa5.64□□□□□ -1.51
MUC1-216ENST00000467134 HERC1Q15751 4861 aa5.64□□□□□ -1.51
MUC1-216ENST00000467134 COA5Q86WW8 74 aa5.62□□□□□ -1.51
MUC1-216ENST00000467134 MUC17Q685J3 4493 aa5.61□□□□□ -1.51
MUC1-216ENST00000467134 RBM12B-AS1Q9P1G2 102 aa5.61□□□□□ -1.51
MUC1-216ENST00000467134 KRTAP3-1Q9BYR8 98 aa5.6□□□□□ -1.51
MUC1-216ENST00000467134 LCE2AQ5TA79 106 aaPredicted RBP5.57□□□□□ -1.52
MUC1-216ENST00000467134 SMIM26A0A096LP01 95 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms