RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 LRRK2Q5S007 2527 aa-0.48□□□□□ -2.49
PRPF40A-205ENST00000467114 KRTAP20-2Q3LI61 65 aa-0.48□□□□□ -2.49
PRPF40A-205ENST00000467114 DSTQ03001 7570 aaKnown RBP-0.48□□□□□ -2.49
PRPF40A-205ENST00000467114 ANKRD36CQ5JPF3 1778 aa-0.49□□□□□ -2.49
PRPF40A-205ENST00000467114 LAMA1P25391 3075 aa-0.49□□□□□ -2.49
PRPF40A-205ENST00000467114 RPS27P42677 84 aaKnown RBP-0.49□□□□□ -2.49
PRPF40A-205ENST00000467114 MINOS1Q5TGZ0 78 aa-0.49□□□□□ -2.49
PRPF40A-205ENST00000467114 RPS27LQ71UM5 84 aaKnown RBP-0.49□□□□□ -2.49
PRPF40A-205ENST00000467114 SMCO4Q9NRQ5 59 aa-0.49□□□□□ -2.49
PRPF40A-205ENST00000467114 GNG13Q9P2W3 67 aa-0.49□□□□□ -2.49
PRPF40A-205ENST00000467114 ITSN2Q9NZM3 1697 aa-0.49□□□□□ -2.49
PRPF40A-205ENST00000467114 UBR4Q5T4S7 5183 aa-0.5□□□□□ -2.49
PRPF40A-205ENST00000467114 MUC17Q685J3 4493 aa-0.5□□□□□ -2.49
PRPF40A-205ENST00000467114 SACSQ9NZJ4 4579 aa-0.5□□□□□ -2.49
PRPF40A-205ENST00000467114 NBEAQ8NFP9 2946 aa-0.5□□□□□ -2.49
PRPF40A-205ENST00000467114 BPTFQ12830 3046 aa-0.5□□□□□ -2.49
PRPF40A-205ENST00000467114 WT1-ASQ06250 92 aa-0.5□□□□□ -2.49
PRPF40A-205ENST00000467114 DEFB110Q30KQ9 67 aa-0.5□□□□□ -2.49
PRPF40A-205ENST00000467114 MYO18BQ8IUG5 2567 aa-0.5□□□□□ -2.49
PRPF40A-205ENST00000467114 INO80Q9ULG1 1556 aaPredicted RBP-0.5□□□□□ -2.49
PRPF40A-205ENST00000467114 USH2AO75445 5202 aa-0.5□□□□□ -2.49
PRPF40A-205ENST00000467114 WDR87Q6ZQQ6 2873 aa-0.51□□□□□ -2.49
PRPF40A-205ENST00000467114 NCBP2-AS2Q69YL0 99 aa-0.51□□□□□ -2.49
PRPF40A-205ENST00000467114 NHSQ6T4R5 1651 aa-0.51□□□□□ -2.49
PRPF40A-205ENST00000467114 DUOX2Q9NRD8 1548 aa-0.51□□□□□ -2.49
PRPF40A-205ENST00000467114 SCRIBQ14160 1630 aa-0.52□□□□□ -2.49
PRPF40A-205ENST00000467114 ABCA9Q8IUA7 1624 aa-0.52□□□□□ -2.49
PRPF40A-205ENST00000467114 ASXL1Q8IXJ9 1541 aa-0.52□□□□□ -2.49
PRPF40A-205ENST00000467114 ITPR3Q14573 2671 aa-0.52□□□□□ -2.49
PRPF40A-205ENST00000467114 PDCD5O14737 125 aa-0.52□□□□□ -2.49
PRPF40A-205ENST00000467114 SFTA3P0C7M3 94 aa-0.52□□□□□ -2.49
PRPF40A-205ENST00000467114 ACACAQ13085 2346 aa-0.52□□□□□ -2.49
PRPF40A-205ENST00000467114 DNAH2Q9P225 4427 aa-0.52□□□□□ -2.49
PRPF40A-205ENST00000467114 TRIOO75962 3097 aa-0.53□□□□□ -2.49
PRPF40A-205ENST00000467114 ABCC6O95255 1503 aa-0.53□□□□□ -2.49
PRPF40A-205ENST00000467114 DNAH1Q9P2D7 4330 aa-0.53□□□□□ -2.49
PRPF40A-205ENST00000467114 FCER1GP30273 86 aa-0.53□□□□□ -2.49
PRPF40A-205ENST00000467114 KIF1AQ12756 1690 aa-0.53□□□□□ -2.49
PRPF40A-205ENST00000467114 NBEAL2Q6ZNJ1 2754 aa-0.53□□□□□ -2.49
PRPF40A-205ENST00000467114 USP9YO00507 2555 aaPredicted RBP-0.53□□□□□ -2.5
PRPF40A-205ENST00000467114 MGAM2Q2M2H8 2515 aa-0.54□□□□□ -2.5
PRPF40A-205ENST00000467114 CCDC168Q8NDH2 2452 aa-0.54□□□□□ -2.5
PRPF40A-205ENST00000467114 MT4P47944 62 aa-0.54□□□□□ -2.5
PRPF40A-205ENST00000467114 DEFB114Q30KQ6 69 aa-0.54□□□□□ -2.5
PRPF40A-205ENST00000467114 C6orf48Q9UBA6 75 aa-0.54□□□□□ -2.5
PRPF40A-205ENST00000467114 FAM186AA6NE01 2351 aa-0.54□□□□□ -2.5
PRPF40A-205ENST00000467114 TOGARAM1Q9Y4F4 1720 aa-0.55□□□□□ -2.5
PRPF40A-205ENST00000467114 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.55□□□□□ -2.5
PRPF40A-205ENST00000467114 RANBP2P49792 3224 aaKnown RBP-0.55□□□□□ -2.5
PRPF40A-205ENST00000467114 ACACBO00763 2458 aa-0.56□□□□□ -2.5
PRPF40A-205ENST00000467114 DNMBPQ6XZF7 1577 aa-0.56□□□□□ -2.5
PRPF40A-205ENST00000467114 LINC01549A6NIU2 74 aa-0.56□□□□□ -2.5
PRPF40A-205ENST00000467114 HERC2O95714 4834 aa-0.56□□□□□ -2.5
PRPF40A-205ENST00000467114 C3P01024 1663 aa-0.56□□□□□ -2.5
PRPF40A-205ENST00000467114 DNAH8Q96JB1 4490 aa-0.57□□□□□ -2.5
PRPF40A-205ENST00000467114 IGLV5-48A0A075B6I7 105 aa-0.58□□□□□ -2.5
PRPF40A-205ENST00000467114 A0A0C4DFX4 3053 aa-0.58□□□□□ -2.5
PRPF40A-205ENST00000467114 MADDQ8WXG6 1647 aa-0.59□□□□□ -2.5
PRPF40A-205ENST00000467114 MROH1Q8NDA8 1641 aa-0.6□□□□□ -2.51
PRPF40A-205ENST00000467114 H3BUA1 57 aa-0.61□□□□□ -2.51
PRPF40A-205ENST00000467114 RIF1Q5UIP0 2472 aaKnown RBP-0.62□□□□□ -2.51
PRPF40A-205ENST00000467114 KRTAP19-5Q3LI72 72 aa-0.62□□□□□ -2.51
PRPF40A-205ENST00000467114 LY75O60449 1722 aa-0.63□□□□□ -2.51
PRPF40A-205ENST00000467114 MMP24-AS1A0A0U1RRL7 71 aa-0.63□□□□□ -2.51
PRPF40A-205ENST00000467114 M0R1W7 72 aa-0.63□□□□□ -2.51
PRPF40A-205ENST00000467114 CLASP1Q7Z460 1538 aa-0.64□□□□□ -2.51
PRPF40A-205ENST00000467114 PLECQ15149 4684 aaKnown RBP-0.64□□□□□ -2.51
PRPF40A-205ENST00000467114 EPPK1P58107 5090 aaKnown RBP-0.64□□□□□ -2.51
PRPF40A-205ENST00000467114 EFCAB5A4FU69 1503 aa-0.64□□□□□ -2.51
PRPF40A-205ENST00000467114 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.65□□□□□ -2.51
PRPF40A-205ENST00000467114 K7EMI3 77 aa-0.65□□□□□ -2.51
PRPF40A-205ENST00000467114 TNP1P09430 55 aa-0.65□□□□□ -2.51
PRPF40A-205ENST00000467114 NOP10Q9NPE3 64 aaKnown RBP-0.65□□□□□ -2.51
PRPF40A-205ENST00000467114 DEFB1P60022 68 aa-0.66□□□□□ -2.52
PRPF40A-205ENST00000467114 CROCC2H7BZ55 1655 aa-0.66□□□□□ -2.52
PRPF40A-205ENST00000467114 CDC42BPAQ5VT25 1732 aa-0.67□□□□□ -2.52
PRPF40A-205ENST00000467114 TLN2Q9Y4G6 2542 aa-0.67□□□□□ -2.52
PRPF40A-205ENST00000467114 ABCA6Q8N139 1617 aa-0.67□□□□□ -2.52
PRPF40A-205ENST00000467114 RYR1P21817 5038 aa-0.67□□□□□ -2.52
PRPF40A-205ENST00000467114 COL12A1Q99715 3063 aa-0.67□□□□□ -2.52
PRPF40A-205ENST00000467114 SPENQ96T58 3664 aaKnown RBP-0.67□□□□□ -2.52
PRPF40A-205ENST00000467114 TIAM1Q13009 1591 aa-0.67□□□□□ -2.52
PRPF40A-205ENST00000467114 RELNP78509 3460 aa-0.68□□□□□ -2.52
PRPF40A-205ENST00000467114 SPTBN5Q9NRC6 3674 aaKnown RBP-0.68□□□□□ -2.52
PRPF40A-205ENST00000467114 USP9XQ93008 2570 aaPredicted RBP-0.68□□□□□ -2.52
PRPF40A-205ENST00000467114 MT1HP80294 61 aa-0.68□□□□□ -2.52
PRPF40A-205ENST00000467114 EEA1Q15075 1411 aa-0.68□□□□□ -2.52
PRPF40A-205ENST00000467114 GLI2P10070 1586 aa-0.69□□□□□ -2.52
PRPF40A-205ENST00000467114 TEX15Q9BXT5 2789 aa-0.69□□□□□ -2.52
PRPF40A-205ENST00000467114 SMR3BP02814 79 aaPredicted RBP-0.69□□□□□ -2.52
PRPF40A-205ENST00000467114 CLPSL2Q6UWE3 100 aa-0.69□□□□□ -2.52
PRPF40A-205ENST00000467114 C5orf42Q9H799 3197 aa-0.69□□□□□ -2.52
PRPF40A-205ENST00000467114 FRYQ5TBA9 3013 aa-0.69□□□□□ -2.52
PRPF40A-205ENST00000467114 CMYA5Q8N3K9 4069 aa-0.7□□□□□ -2.52
PRPF40A-205ENST00000467114 A0A087WWC5 75 aa-0.7□□□□□ -2.52
PRPF40A-205ENST00000467114 LINC00308Q8TCZ7 52 aa-0.7□□□□□ -2.52
PRPF40A-205ENST00000467114 NMES1Q9C002 83 aa-0.7□□□□□ -2.52
PRPF40A-205ENST00000467114 KAAG1Q9UBP8 84 aa-0.7□□□□□ -2.52
PRPF40A-205ENST00000467114 MAST1Q9Y2H9 1570 aa-0.7□□□□□ -2.52
PRPF40A-205ENST00000467114 BIRC6Q9NR09 4857 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms