RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 KRTAP29-1A8MX34 341 aaPredicted RBP12.18□□□□□ -0.46
PPP1R3F-203ENST00000466508 LIMD2Q9BT23 127 aa12.18□□□□□ -0.46
PPP1R3F-203ENST00000466508 A0A1B0GVX0 72 aa12.17□□□□□ -0.46
PPP1R3F-203ENST00000466508 SPINK1P00995 79 aa12.17□□□□□ -0.46
PPP1R3F-203ENST00000466508 CASC2Q6XLA1 102 aa12.17□□□□□ -0.46
PPP1R3F-203ENST00000466508 MMP24-AS1A0A0U1RRL7 71 aa12.16□□□□□ -0.46
PPP1R3F-203ENST00000466508 Q5VSD8 79 aa12.14□□□□□ -0.47
PPP1R3F-203ENST00000466508 IGHV6-1A0A0B4J1U7 121 aa12.13□□□□□ -0.47
PPP1R3F-203ENST00000466508 LINC00304Q8N9R0 145 aa12.13□□□□□ -0.47
PPP1R3F-203ENST00000466508 C1orf195Q5TG92 126 aa12.12□□□□□ -0.47
PPP1R3F-203ENST00000466508 C8orf17Q9NRJ1 99 aa12.11□□□□□ -0.47
PPP1R3F-203ENST00000466508 SPAG11AQ6PDA7 123 aa12.1□□□□□ -0.47
PPP1R3F-203ENST00000466508 hDV103S1A0JD37 113 aa12.09□□□□□ -0.47
PPP1R3F-203ENST00000466508 RPS29P62273 56 aaKnown RBP12.09□□□□□ -0.47
PPP1R3F-203ENST00000466508 C20orf197Q8N268 126 aa12.09□□□□□ -0.47
PPP1R3F-203ENST00000466508 CYSTM1Q9H1C7 97 aa12.05□□□□□ -0.48
PPP1R3F-203ENST00000466508 NOTCH2NLQ7Z3S9 236 aa12.03□□□□□ -0.48
PPP1R3F-203ENST00000466508 KLKP1Q107X0 134 aa12.02□□□□□ -0.48
PPP1R3F-203ENST00000466508 SVIPQ8NHG7 77 aa12.02□□□□□ -0.49
PPP1R3F-203ENST00000466508 TMEM254Q8TBM7 123 aa12.02□□□□□ -0.49
PPP1R3F-203ENST00000466508 C8orf87E5RJ46 101 aa11.99□□□□□ -0.49
PPP1R3F-203ENST00000466508 SNURFQ9Y675 71 aa11.98□□□□□ -0.49
PPP1R3F-203ENST00000466508 MRPL34Q9BQ48 92 aaKnown RBP11.97□□□□□ -0.49
PPP1R3F-203ENST00000466508 C5orf47Q569G3 176 aa11.97□□□□□ -0.49
PPP1R3F-203ENST00000466508 A0A0U1RQV1 116 aa11.95□□□□□ -0.5
PPP1R3F-203ENST00000466508 LRP1Q07954 4544 aaKnown RBP11.94□□□□□ -0.5
PPP1R3F-203ENST00000466508 LINC00313P59037 77 aa11.93□□□□□ -0.5
PPP1R3F-203ENST00000466508 TP53AIP1Q9HCN2 124 aa11.92□□□□□ -0.5
PPP1R3F-203ENST00000466508 FLG2Q5D862 2391 aaPredicted RBP11.92□□□□□ -0.5
PPP1R3F-203ENST00000466508 TNXBP22105 4242 aa11.91□□□□□ -0.5
PPP1R3F-203ENST00000466508 H7BZZ5 65 aa11.89□□□□□ -0.51
PPP1R3F-203ENST00000466508 NDUFS5O43920 106 aa11.89□□□□□ -0.51
PPP1R3F-203ENST00000466508 KRTAP10-8P60410 259 aa11.89□□□□□ -0.51
PPP1R3F-203ENST00000466508 NDUFC1O43677 76 aa11.88□□□□□ -0.51
PPP1R3F-203ENST00000466508 MP68P56378 58 aa11.87□□□□□ -0.51
PPP1R3F-203ENST00000466508 TMEM258P61165 79 aa11.87□□□□□ -0.51
PPP1R3F-203ENST00000466508 MYCBP2O75592 4640 aa11.85□□□□□ -0.51
PPP1R3F-203ENST00000466508 TRAV22A0A0B4J277 110 aa11.85□□□□□ -0.51
PPP1R3F-203ENST00000466508 H0Y9P7 68 aa11.85□□□□□ -0.51
PPP1R3F-203ENST00000466508 ZCCHC13Q8WW36 166 aaKnown RBP11.85□□□□□ -0.51
PPP1R3F-203ENST00000466508 FAT3Q8TDW7 4589 aa11.84□□□□□ -0.51
PPP1R3F-203ENST00000466508 DMBT1Q9UGM3 2413 aaPredicted RBP11.82□□□□□ -0.52
PPP1R3F-203ENST00000466508 KRTAP16-1A8MUX0 517 aa11.81□□□□□ -0.52
PPP1R3F-203ENST00000466508 H3BPC8 53 aa11.81□□□□□ -0.52
PPP1R3F-203ENST00000466508 Q8N9P0 234 aaPredicted RBP11.8□□□□□ -0.52
PPP1R3F-203ENST00000466508 LINC00208Q96KT6 92 aa11.8□□□□□ -0.52
PPP1R3F-203ENST00000466508 C1orf64Q8NEQ6 169 aa11.74□□□□□ -0.53
PPP1R3F-203ENST00000466508 RETNLBQ9BQ08 111 aa11.74□□□□□ -0.53
PPP1R3F-203ENST00000466508 J3QL48 77 aa11.72□□□□□ -0.53
PPP1R3F-203ENST00000466508 FAM236DA0A1B0GTK5 79 aa11.71□□□□□ -0.53
PPP1R3F-203ENST00000466508 FAM236CP0DP71 79 aa11.71□□□□□ -0.53
PPP1R3F-203ENST00000466508 MT1HL1P0DM35 61 aa11.7□□□□□ -0.54
PPP1R3F-203ENST00000466508 KRTAP13-3Q3SY46 172 aa11.7□□□□□ -0.54
PPP1R3F-203ENST00000466508 Q5W150 140 aa11.7□□□□□ -0.54
PPP1R3F-203ENST00000466508 HERC1Q15751 4861 aa11.68□□□□□ -0.54
PPP1R3F-203ENST00000466508 OXTP01178 125 aa11.67□□□□□ -0.54
PPP1R3F-203ENST00000466508 ATP5EP56381 51 aaPredicted RBP11.64□□□□□ -0.55
PPP1R3F-203ENST00000466508 C9orf92A6NGG3 77 aa11.62□□□□□ -0.55
PPP1R3F-203ENST00000466508 LOC101927531A0A1B0GV80 90 aa11.59□□□□□ -0.55
PPP1R3F-203ENST00000466508 FP248Q71RG6 208 aaPredicted RBP11.59□□□□□ -0.55
PPP1R3F-203ENST00000466508 C20orf166-AS1Q96NR2 134 aa11.55□□□□□ -0.56
PPP1R3F-203ENST00000466508 A8MUU9 505 aa11.53□□□□□ -0.56
PPP1R3F-203ENST00000466508 RPS28P62857 69 aaKnown RBP11.53□□□□□ -0.56
PPP1R3F-203ENST00000466508 PCOTHQ58A44 107 aa11.53□□□□□ -0.56
PPP1R3F-203ENST00000466508 SPANXA2-OT1Q8N9U9 137 aa11.53□□□□□ -0.56
PPP1R3F-203ENST00000466508 CYP4F30PQ9H0H9 118 aa11.51□□□□□ -0.57
PPP1R3F-203ENST00000466508 SERP1Q9Y6X1 66 aa11.49□□□□□ -0.57
PPP1R3F-203ENST00000466508 IGLV7-46A0A075B6I9 117 aa11.47□□□□□ -0.57
PPP1R3F-203ENST00000466508 IGKV2-30P06310 120 aa11.47□□□□□ -0.57
PPP1R3F-203ENST00000466508 PRR4Q16378 134 aa11.46□□□□□ -0.57
PPP1R3F-203ENST00000466508 Q75L30 129 aa11.42□□□□□ -0.58
PPP1R3F-203ENST00000466508 IGKV2D-30A0A075B6S6 120 aa11.39□□□□□ -0.59
PPP1R3F-203ENST00000466508 C7orf65Q6ZTY9 151 aa11.34□□□□□ -0.59
PPP1R3F-203ENST00000466508 HRES1P13985 223 aa11.33□□□□□ -0.6
PPP1R3F-203ENST00000466508 XP32Q5T750 250 aa11.32□□□□□ -0.6
PPP1R3F-203ENST00000466508 RPL37P61927 97 aaKnown RBP11.27□□□□□ -0.6
PPP1R3F-203ENST00000466508 HMCN2Q8NDA2 5059 aa11.26□□□□□ -0.61
PPP1R3F-203ENST00000466508 TPRXLQ17RH7 258 aa11.25□□□□□ -0.61
PPP1R3F-203ENST00000466508 ATP11AUNQ6ZP68 121 aa11.24□□□□□ -0.61
PPP1R3F-203ENST00000466508 SMIM26A0A096LP01 95 aa11.2□□□□□ -0.62
PPP1R3F-203ENST00000466508 DMAC1Q96GE9 116 aa11.2□□□□□ -0.62
PPP1R3F-203ENST00000466508 SPINK7P58062 85 aa11.19□□□□□ -0.62
PPP1R3F-203ENST00000466508 COA5Q86WW8 74 aa11.19□□□□□ -0.62
PPP1R3F-203ENST00000466508 ACYP2P14621 99 aa11.13□□□□□ -0.63
PPP1R3F-203ENST00000466508 C4orf26Q17RF5 130 aa11.09□□□□□ -0.63
PPP1R3F-203ENST00000466508 LPAP08519 4548 aa11.08□□□□□ -0.64
PPP1R3F-203ENST00000466508 LRP2P98164 4655 aa11.08□□□□□ -0.64
PPP1R3F-203ENST00000466508 A8MUN3 132 aa11.03□□□□□ -0.64
PPP1R3F-203ENST00000466508 MPLKIPQ8TAP9 179 aa11□□□□□ -0.65
PPP1R3F-203ENST00000466508 UBR4Q5T4S7 5183 aa11□□□□□ -0.65
PPP1R3F-203ENST00000466508 CHKB-CPT1BH3BT56 60 aa10.96□□□□□ -0.65
PPP1R3F-203ENST00000466508 Q1T7F1 81 aa10.96□□□□□ -0.65
PPP1R3F-203ENST00000466508 KRTAP3-1Q9BYR8 98 aa10.93□□□□□ -0.66
PPP1R3F-203ENST00000466508 COX6B2Q6YFQ2 88 aa10.92□□□□□ -0.66
PPP1R3F-203ENST00000466508 V9GYY9 64 aa10.9□□□□□ -0.66
PPP1R3F-203ENST00000466508 SEC61BP60468 96 aaKnown RBP10.84□□□□□ -0.67
PPP1R3F-203ENST00000466508 LINC01558Q9Y6Z2 57 aa10.78□□□□□ -0.68
PPP1R3F-203ENST00000466508 PSPHP1O15172 72 aa10.76□□□□□ -0.69
PPP1R3F-203ENST00000466508 PRR15LQ9BU68 103 aa10.72□□□□□ -0.69
PPP1R3F-203ENST00000466508 RNF213Q63HN8 5207 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms