RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 C1orf64Q8NEQ6 169 aa11.98□□□□□ -0.49
TUBGCP3-204ENST00000464139 SACSQ9NZJ4 4579 aa11.97□□□□□ -0.49
TUBGCP3-204ENST00000464139 H3BPC8 53 aa11.96□□□□□ -0.49
TUBGCP3-204ENST00000464139 NDUFS5O43920 106 aa11.94□□□□□ -0.5
TUBGCP3-204ENST00000464139 SSBP3-AS1Q7Z2R9 100 aa11.93□□□□□ -0.5
TUBGCP3-204ENST00000464139 MPLKIPQ8TAP9 179 aa11.92□□□□□ -0.5
TUBGCP3-204ENST00000464139 CYP4F30PQ9H0H9 118 aa11.92□□□□□ -0.5
TUBGCP3-204ENST00000464139 TP53AIP1Q9HCN2 124 aa11.91□□□□□ -0.5
TUBGCP3-204ENST00000464139 VPS13BQ7Z7G8 4022 aa11.9□□□□□ -0.5
TUBGCP3-204ENST00000464139 CD164Q04900 197 aa11.89□□□□□ -0.51
TUBGCP3-204ENST00000464139 MRPL34Q9BQ48 92 aaKnown RBP11.89□□□□□ -0.51
TUBGCP3-204ENST00000464139 KRTAP13-2Q52LG2 175 aa11.89□□□□□ -0.51
TUBGCP3-204ENST00000464139 PKHD1P08F94 4074 aa11.87□□□□□ -0.51
TUBGCP3-204ENST00000464139 SPANXA2-OT1Q8N9U9 137 aa11.83□□□□□ -0.52
TUBGCP3-204ENST00000464139 PCOTHQ58A44 107 aa11.82□□□□□ -0.52
TUBGCP3-204ENST00000464139 KRTAP1-4P0C5Y4 121 aa11.79□□□□□ -0.52
TUBGCP3-204ENST00000464139 LINC00336Q6ZUF6 198 aa11.75□□□□□ -0.53
TUBGCP3-204ENST00000464139 C1orf195Q5TG92 126 aa11.74□□□□□ -0.53
TUBGCP3-204ENST00000464139 Q5W150 140 aa11.73□□□□□ -0.53
TUBGCP3-204ENST00000464139 IGLV7-46A0A075B6I9 117 aa11.72□□□□□ -0.53
TUBGCP3-204ENST00000464139 KMT2CQ8NEZ4 4911 aaKnown RBP11.71□□□□□ -0.53
TUBGCP3-204ENST00000464139 PLA2G1BP04054 148 aaKnown RBP11.7□□□□□ -0.54
TUBGCP3-204ENST00000464139 C8orf87E5RJ46 101 aa11.69□□□□□ -0.54
TUBGCP3-204ENST00000464139 LINC00313P59037 77 aa11.68□□□□□ -0.54
TUBGCP3-204ENST00000464139 Q1T7F1 81 aa11.68□□□□□ -0.54
TUBGCP3-204ENST00000464139 KRTAP13-3Q3SY46 172 aa11.66□□□□□ -0.54
TUBGCP3-204ENST00000464139 DYNC1H1Q14204 4646 aaKnown RBP11.64□□□□□ -0.55
TUBGCP3-204ENST00000464139 TYMSOSQ8TAI1 123 aa11.63□□□□□ -0.55
TUBGCP3-204ENST00000464139 RYR2Q92736 4967 aa11.62□□□□□ -0.55
TUBGCP3-204ENST00000464139 COA5Q86WW8 74 aa11.62□□□□□ -0.55
TUBGCP3-204ENST00000464139 LIMD2Q9BT23 127 aa11.62□□□□□ -0.55
TUBGCP3-204ENST00000464139 SMR3BP02814 79 aaPredicted RBP11.61□□□□□ -0.55
TUBGCP3-204ENST00000464139 Q8N9P0 234 aaPredicted RBP11.61□□□□□ -0.55
TUBGCP3-204ENST00000464139 LOC101927531A0A1B0GV80 90 aa11.61□□□□□ -0.55
TUBGCP3-204ENST00000464139 PSPHP1O15172 72 aa11.61□□□□□ -0.55
TUBGCP3-204ENST00000464139 C4orf48Q5BLP8 95 aa11.6□□□□□ -0.55
TUBGCP3-204ENST00000464139 RETNLBQ9BQ08 111 aa11.6□□□□□ -0.55
TUBGCP3-204ENST00000464139 BRK1Q8WUW1 75 aa11.57□□□□□ -0.56
TUBGCP3-204ENST00000464139 PRR26Q8N8Z3 221 aa11.55□□□□□ -0.56
TUBGCP3-204ENST00000464139 KRTAP16-1A8MUX0 517 aa11.54□□□□□ -0.56
TUBGCP3-204ENST00000464139 PRO0628Q9UI54 55 aa11.53□□□□□ -0.56
TUBGCP3-204ENST00000464139 FAT1Q14517 4588 aa11.52□□□□□ -0.57
TUBGCP3-204ENST00000464139 A8MUN3 132 aa11.52□□□□□ -0.57
TUBGCP3-204ENST00000464139 SPINK1P00995 79 aa11.52□□□□□ -0.57
TUBGCP3-204ENST00000464139 A0A1B0GVY2 172 aa11.51□□□□□ -0.57
TUBGCP3-204ENST00000464139 FAM229AH3BQW9 127 aa11.51□□□□□ -0.57
TUBGCP3-204ENST00000464139 V9GYY9 64 aa11.5□□□□□ -0.57
TUBGCP3-204ENST00000464139 HRES1P13985 223 aa11.5□□□□□ -0.57
TUBGCP3-204ENST00000464139 APOBP04114 4563 aaKnown RBP11.48□□□□□ -0.57
TUBGCP3-204ENST00000464139 LINC00304Q8N9R0 145 aa11.47□□□□□ -0.57
TUBGCP3-204ENST00000464139 Q5VV11 94 aa11.42□□□□□ -0.58
TUBGCP3-204ENST00000464139 PRR15LQ9BU68 103 aa11.41□□□□□ -0.58
TUBGCP3-204ENST00000464139 IGKV2-30P06310 120 aa11.41□□□□□ -0.58
TUBGCP3-204ENST00000464139 KRTAP10-4P60372 401 aaPredicted RBP11.39□□□□□ -0.59
TUBGCP3-204ENST00000464139 RYR3Q15413 4870 aa11.39□□□□□ -0.59
TUBGCP3-204ENST00000464139 SPAG11AQ6PDA7 123 aa11.38□□□□□ -0.59
TUBGCP3-204ENST00000464139 IGKV2D-30A0A075B6S6 120 aa11.34□□□□□ -0.59
TUBGCP3-204ENST00000464139 RPS29P62273 56 aaKnown RBP11.34□□□□□ -0.59
TUBGCP3-204ENST00000464139 PKHD1L1Q86WI1 4243 aa11.32□□□□□ -0.6
TUBGCP3-204ENST00000464139 ACYP2P14621 99 aa11.32□□□□□ -0.6
TUBGCP3-204ENST00000464139 CHKB-CPT1BH3BT56 60 aa11.31□□□□□ -0.6
TUBGCP3-204ENST00000464139 DMAC1Q96GE9 116 aa11.3□□□□□ -0.6
TUBGCP3-204ENST00000464139 LINC01558Q9Y6Z2 57 aa11.28□□□□□ -0.6
TUBGCP3-204ENST00000464139 A8MU10 97 aa11.25□□□□□ -0.61
TUBGCP3-204ENST00000464139 Q75L30 129 aa11.24□□□□□ -0.61
TUBGCP3-204ENST00000464139 C9orf92A6NGG3 77 aa11.23□□□□□ -0.61
TUBGCP3-204ENST00000464139 A6NED7 52 aa11.17□□□□□ -0.62
TUBGCP3-204ENST00000464139 HSPG2P98160 4391 aa11.14□□□□□ -0.63
TUBGCP3-204ENST00000464139 C7orf65Q6ZTY9 151 aa11.13□□□□□ -0.63
TUBGCP3-204ENST00000464139 LCA10Q71F78 164 aa11.11□□□□□ -0.63
TUBGCP3-204ENST00000464139 LRP1Q07954 4544 aaKnown RBP11.09□□□□□ -0.63
TUBGCP3-204ENST00000464139 C20orf166-AS1Q96NR2 134 aa11.08□□□□□ -0.64
TUBGCP3-204ENST00000464139 FLG2Q5D862 2391 aaPredicted RBP11.08□□□□□ -0.64
TUBGCP3-204ENST00000464139 A8MUU9 505 aa11.08□□□□□ -0.64
TUBGCP3-204ENST00000464139 SPINK7P58062 85 aa11.07□□□□□ -0.64
TUBGCP3-204ENST00000464139 Q8N1X5 172 aa11.06□□□□□ -0.64
TUBGCP3-204ENST00000464139 TNXBP22105 4242 aa11.03□□□□□ -0.64
TUBGCP3-204ENST00000464139 KIAA1109Q2LD37 5005 aa11.02□□□□□ -0.65
TUBGCP3-204ENST00000464139 RYR1P21817 5038 aa11.01□□□□□ -0.65
TUBGCP3-204ENST00000464139 Q5VSD8 79 aa11□□□□□ -0.65
TUBGCP3-204ENST00000464139 CDC42SE1Q9NRR8 79 aa10.99□□□□□ -0.65
TUBGCP3-204ENST00000464139 EPPK1P58107 5090 aaKnown RBP10.99□□□□□ -0.65
TUBGCP3-204ENST00000464139 SPTSSBQ8NFR3 76 aa10.98□□□□□ -0.65
TUBGCP3-204ENST00000464139 FAT3Q8TDW7 4589 aa10.98□□□□□ -0.65
TUBGCP3-204ENST00000464139 A0A1B0GU69 56 aa10.95□□□□□ -0.66
TUBGCP3-204ENST00000464139 KRTAP10-8P60410 259 aa10.94□□□□□ -0.66
TUBGCP3-204ENST00000464139 PMAIP1Q13794 54 aa10.92□□□□□ -0.66
TUBGCP3-204ENST00000464139 KRTAP17-1Q9BYP8 105 aa10.91□□□□□ -0.66
TUBGCP3-204ENST00000464139 SEC61GP60059 68 aa10.91□□□□□ -0.66
TUBGCP3-204ENST00000464139 ATP11AUNQ6ZP68 121 aa10.9□□□□□ -0.66
TUBGCP3-204ENST00000464139 MYCBP2O75592 4640 aa10.87□□□□□ -0.67
TUBGCP3-204ENST00000464139 DMBT1Q9UGM3 2413 aaPredicted RBP10.86□□□□□ -0.67
TUBGCP3-204ENST00000464139 KRTAP3-1Q9BYR8 98 aa10.84□□□□□ -0.67
TUBGCP3-204ENST00000464139 A6NN06 94 aa10.73□□□□□ -0.69
TUBGCP3-204ENST00000464139 UQCR11O14957 56 aa10.7□□□□□ -0.7
TUBGCP3-204ENST00000464139 SPATA8Q6RVD6 105 aa10.68□□□□□ -0.7
TUBGCP3-204ENST00000464139 MIR22HGQ0VDD5 57 aa10.67□□□□□ -0.7
TUBGCP3-204ENST00000464139 MT1HL1P0DM35 61 aa10.67□□□□□ -0.7
TUBGCP3-204ENST00000464139 COX6B2Q6YFQ2 88 aa10.67□□□□□ -0.7
TUBGCP3-204ENST00000464139 XP32Q5T750 250 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms