RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 DEFB110Q30KQ9 67 aa-0.71□□□□□ -2.52
VCL-203ENST00000461383 KALRNO60229 2985 aa-0.71□□□□□ -2.52
VCL-203ENST00000461383 MUC17Q685J3 4493 aa-0.71□□□□□ -2.52
VCL-203ENST00000461383 ABCA8O94911 1581 aa-0.71□□□□□ -2.52
VCL-203ENST00000461383 UTP20O75691 2785 aaKnown RBP-0.72□□□□□ -2.52
VCL-203ENST00000461383 ETDCA0A1B0GVM5 59 aa-0.72□□□□□ -2.52
VCL-203ENST00000461383 NHSQ6T4R5 1651 aa-0.72□□□□□ -2.53
VCL-203ENST00000461383 MGAM2Q2M2H8 2515 aa-0.73□□□□□ -2.53
VCL-203ENST00000461383 NBEAQ8NFP9 2946 aa-0.73□□□□□ -2.53
VCL-203ENST00000461383 MINOS1Q5TGZ0 78 aa-0.73□□□□□ -2.53
VCL-203ENST00000461383 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.73□□□□□ -2.53
VCL-203ENST00000461383 NBEAL2Q6ZNJ1 2754 aa-0.73□□□□□ -2.53
VCL-203ENST00000461383 INO80Q9ULG1 1556 aaPredicted RBP-0.74□□□□□ -2.53
VCL-203ENST00000461383 MT4P47944 62 aa-0.74□□□□□ -2.53
VCL-203ENST00000461383 WT1-ASQ06250 92 aa-0.74□□□□□ -2.53
VCL-203ENST00000461383 USP9YO00507 2555 aaPredicted RBP-0.74□□□□□ -2.53
VCL-203ENST00000461383 ITSN2Q9NZM3 1697 aa-0.75□□□□□ -2.53
VCL-203ENST00000461383 MYO5CQ9NQX4 1742 aa-0.75□□□□□ -2.53
VCL-203ENST00000461383 ACACBO00763 2458 aa-0.75□□□□□ -2.53
VCL-203ENST00000461383 ATXN8Q156A1 80 aa-0.75□□□□□ -2.53
VCL-203ENST00000461383 KIF1AQ12756 1690 aa-0.75□□□□□ -2.53
VCL-203ENST00000461383 TOGARAM1Q9Y4F4 1720 aa-0.75□□□□□ -2.53
VCL-203ENST00000461383 ITPR3Q14573 2671 aa-0.76□□□□□ -2.53
VCL-203ENST00000461383 HERC2O95714 4834 aa-0.76□□□□□ -2.53
VCL-203ENST00000461383 SACSQ9NZJ4 4579 aa-0.77□□□□□ -2.53
VCL-203ENST00000461383 USH2AO75445 5202 aa-0.78□□□□□ -2.53
VCL-203ENST00000461383 GNG13Q9P2W3 67 aa-0.78□□□□□ -2.53
VCL-203ENST00000461383 DIP2AQ14689 1571 aa-0.79□□□□□ -2.54
VCL-203ENST00000461383 DNAH1Q9P2D7 4330 aa-0.79□□□□□ -2.54
VCL-203ENST00000461383 HILPDAQ9Y5L2 63 aa-0.8□□□□□ -2.54
VCL-203ENST00000461383 IQGAP3Q86VI3 1631 aa-0.81□□□□□ -2.54
VCL-203ENST00000461383 A0A0C4DFX4 3053 aa-0.81□□□□□ -2.54
VCL-203ENST00000461383 CDC42BPGQ6DT37 1551 aa-0.81□□□□□ -2.54
VCL-203ENST00000461383 FCER1GP30273 86 aa-0.81□□□□□ -2.54
VCL-203ENST00000461383 RPS27P42677 84 aaKnown RBP-0.81□□□□□ -2.54
VCL-203ENST00000461383 DEFB114Q30KQ6 69 aa-0.81□□□□□ -2.54
VCL-203ENST00000461383 RPS27LQ71UM5 84 aaKnown RBP-0.81□□□□□ -2.54
VCL-203ENST00000461383 C6orf48Q9UBA6 75 aa-0.81□□□□□ -2.54
VCL-203ENST00000461383 C3P01024 1663 aa-0.81□□□□□ -2.54
VCL-203ENST00000461383 H3BUA1 57 aa-0.82□□□□□ -2.54
VCL-203ENST00000461383 DNAH2Q9P225 4427 aa-0.82□□□□□ -2.54
VCL-203ENST00000461383 UGGT2Q9NYU1 1516 aa-0.83□□□□□ -2.54
VCL-203ENST00000461383 RIF1Q5UIP0 2472 aaKnown RBP-0.83□□□□□ -2.54
VCL-203ENST00000461383 MROH1Q8NDA8 1641 aa-0.83□□□□□ -2.54
VCL-203ENST00000461383 DNMBPQ6XZF7 1577 aa-0.83□□□□□ -2.54
VCL-203ENST00000461383 ABCC6O95255 1503 aa-0.84□□□□□ -2.54
VCL-203ENST00000461383 RANBP2P49792 3224 aaKnown RBP-0.84□□□□□ -2.54
VCL-203ENST00000461383 TRIOO75962 3097 aa-0.85□□□□□ -2.54
VCL-203ENST00000461383 IGLV5-48A0A075B6I7 105 aa-0.85□□□□□ -2.55
VCL-203ENST00000461383 MMP24-AS1A0A0U1RRL7 71 aa-0.85□□□□□ -2.55
VCL-203ENST00000461383 LY75O60449 1722 aa-0.85□□□□□ -2.55
VCL-203ENST00000461383 SMCO4Q9NRQ5 59 aa-0.85□□□□□ -2.55
VCL-203ENST00000461383 DUOX2Q9NRD8 1548 aa-0.85□□□□□ -2.55
VCL-203ENST00000461383 RELNP78509 3460 aa-0.85□□□□□ -2.55
VCL-203ENST00000461383 ABCA9Q8IUA7 1624 aa-0.86□□□□□ -2.55
VCL-203ENST00000461383 PDCD5O14737 125 aa-0.86□□□□□ -2.55
VCL-203ENST00000461383 SFTA3P0C7M3 94 aa-0.86□□□□□ -2.55
VCL-203ENST00000461383 WDR87Q6ZQQ6 2873 aa-0.86□□□□□ -2.55
VCL-203ENST00000461383 DNAH8Q96JB1 4490 aa-0.87□□□□□ -2.55
VCL-203ENST00000461383 NOP10Q9NPE3 64 aaKnown RBP-0.87□□□□□ -2.55
VCL-203ENST00000461383 TLN2Q9Y4G6 2542 aa-0.87□□□□□ -2.55
VCL-203ENST00000461383 SCRIBQ14160 1630 aa-0.88□□□□□ -2.55
VCL-203ENST00000461383 NCBP2-AS2Q69YL0 99 aa-0.88□□□□□ -2.55
VCL-203ENST00000461383 SPENQ96T58 3664 aaKnown RBP-0.88□□□□□ -2.55
VCL-203ENST00000461383 TNP1P09430 55 aa-0.89□□□□□ -2.55
VCL-203ENST00000461383 DEFB1P60022 68 aa-0.9□□□□□ -2.55
VCL-203ENST00000461383 MADDQ8WXG6 1647 aa-0.9□□□□□ -2.55
VCL-203ENST00000461383 ASXL1Q8IXJ9 1541 aa-0.9□□□□□ -2.55
VCL-203ENST00000461383 PLECQ15149 4684 aaKnown RBP-0.91□□□□□ -2.56
VCL-203ENST00000461383 CLPSL2Q6UWE3 100 aa-0.92□□□□□ -2.56
VCL-203ENST00000461383 RYR1P21817 5038 aa-0.93□□□□□ -2.56
VCL-203ENST00000461383 SPTBN5Q9NRC6 3674 aaKnown RBP-0.93□□□□□ -2.56
VCL-203ENST00000461383 EPPK1P58107 5090 aaKnown RBP-0.93□□□□□ -2.56
VCL-203ENST00000461383 MT1HP80294 61 aa-0.93□□□□□ -2.56
VCL-203ENST00000461383 USP9XQ93008 2570 aaPredicted RBP-0.93□□□□□ -2.56
VCL-203ENST00000461383 CDC42BPAQ5VT25 1732 aa-0.93□□□□□ -2.56
VCL-203ENST00000461383 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.94□□□□□ -2.56
VCL-203ENST00000461383 LINC01549A6NIU2 74 aa-0.94□□□□□ -2.56
VCL-203ENST00000461383 K7EMI3 77 aa-0.94□□□□□ -2.56
VCL-203ENST00000461383 CLASP1Q7Z460 1538 aa-0.95□□□□□ -2.56
VCL-203ENST00000461383 COL12A1Q99715 3063 aa-0.96□□□□□ -2.56
VCL-203ENST00000461383 A0A1B0GUL6 1792 aa-0.96□□□□□ -2.56
VCL-203ENST00000461383 KRTAP19-5Q3LI72 72 aa-0.97□□□□□ -2.56
VCL-203ENST00000461383 CROCC2H7BZ55 1655 aa-0.97□□□□□ -2.57
VCL-203ENST00000461383 ABRACLQ9P1F3 81 aa-0.99□□□□□ -2.57
VCL-203ENST00000461383 CMYA5Q8N3K9 4069 aa-1□□□□□ -2.57
VCL-203ENST00000461383 SERF2P84101 59 aa-1□□□□□ -2.57
VCL-203ENST00000461383 LAMA3Q16787 3333 aa-1□□□□□ -2.57
VCL-203ENST00000461383 FRYQ5TBA9 3013 aa-1□□□□□ -2.57
VCL-203ENST00000461383 TIAM1Q13009 1591 aa-1□□□□□ -2.57
VCL-203ENST00000461383 TEX15Q9BXT5 2789 aa-1.01□□□□□ -2.57
VCL-203ENST00000461383 DOPEY1Q5JWR5 2465 aa-1.01□□□□□ -2.57
VCL-203ENST00000461383 M0R1W7 72 aa-1.01□□□□□ -2.57
VCL-203ENST00000461383 BIRC6Q9NR09 4857 aa-1.02□□□□□ -2.57
VCL-203ENST00000461383 M0QY20 66 aa-1.02□□□□□ -2.57
VCL-203ENST00000461383 NEBP20929 6669 aa-1.03□□□□□ -2.57
VCL-203ENST00000461383 SRCAPQ6ZRS2 3230 aa-1.03□□□□□ -2.57
VCL-203ENST00000461383 NMES1Q9C002 83 aa-1.03□□□□□ -2.57
VCL-203ENST00000461383 CELSR3Q9NYQ7 3312 aa-1.03□□□□□ -2.57
VCL-203ENST00000461383 NIPBLQ6KC79 2804 aaeCLIP-1.03□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms