RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ZNF861PO60384 105 aa9.35□□□□□ -0.91
LMNB1-203ENST00000460265 A8MWP4 228 aa9.34□□□□□ -0.91
LMNB1-203ENST00000460265 DNAH9Q9NYC9 4486 aa9.32□□□□□ -0.92
LMNB1-203ENST00000460265 IGLV8-61A0A075B6I0 122 aa9.3□□□□□ -0.92
LMNB1-203ENST00000460265 ADM2Q7Z4H4 148 aa9.3□□□□□ -0.92
LMNB1-203ENST00000460265 PLECQ15149 4684 aaKnown RBP9.29□□□□□ -0.92
LMNB1-203ENST00000460265 LINC01554Q52M75 96 aa9.29□□□□□ -0.92
LMNB1-203ENST00000460265 KRTAP10-2P60368 255 aa9.29□□□□□ -0.92
LMNB1-203ENST00000460265 WWC2-AS2Q96NR7 200 aa9.29□□□□□ -0.92
LMNB1-203ENST00000460265 SPRR1BP22528 89 aa9.28□□□□□ -0.92
LMNB1-203ENST00000460265 Q6ZR54 194 aa9.28□□□□□ -0.92
LMNB1-203ENST00000460265 RETNLBQ9BQ08 111 aa9.28□□□□□ -0.92
LMNB1-203ENST00000460265 LINC00472Q9H8W2 130 aa9.26□□□□□ -0.93
LMNB1-203ENST00000460265 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
LMNB1-203ENST00000460265 DNAH3Q8TD57 4116 aa9.26□□□□□ -0.93
LMNB1-203ENST00000460265 HRES1P13985 223 aa9.24□□□□□ -0.93
LMNB1-203ENST00000460265 PLAC8Q9NZF1 115 aa9.24□□□□□ -0.93
LMNB1-203ENST00000460265 PRR26Q8N8Z3 221 aa9.24□□□□□ -0.93
LMNB1-203ENST00000460265 DNAH7Q8WXX0 4024 aa9.21□□□□□ -0.93
LMNB1-203ENST00000460265 KRTAP13-1Q8IUC0 172 aa9.2□□□□□ -0.94
LMNB1-203ENST00000460265 PRKDCP78527 4128 aaKnown RBP9.2□□□□□ -0.94
LMNB1-203ENST00000460265 MMP24-AS1A0A0U1RRL7 71 aa9.19□□□□□ -0.94
LMNB1-203ENST00000460265 C8orf17Q9NRJ1 99 aa9.19□□□□□ -0.94
LMNB1-203ENST00000460265 TP53AIP1Q9HCN2 124 aa9.18□□□□□ -0.94
LMNB1-203ENST00000460265 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
LMNB1-203ENST00000460265 DNHD1Q96M86 4753 aa9.16□□□□□ -0.94
LMNB1-203ENST00000460265 A0A1B0GVX0 72 aa9.15□□□□□ -0.94
LMNB1-203ENST00000460265 STARD9Q9P2P6 4700 aa9.15□□□□□ -0.94
LMNB1-203ENST00000460265 KRTAP10-1P60331 282 aa9.14□□□□□ -0.95
LMNB1-203ENST00000460265 PLA2G1BP04054 148 aaKnown RBP9.14□□□□□ -0.95
LMNB1-203ENST00000460265 A0A087X002 238 aa9.12□□□□□ -0.95
LMNB1-203ENST00000460265 NOTCH2NLQ7Z3S9 236 aa9.12□□□□□ -0.95
LMNB1-203ENST00000460265 MRPL34Q9BQ48 92 aaKnown RBP9.11□□□□□ -0.95
LMNB1-203ENST00000460265 KMT2AQ03164 3969 aa9.09□□□□□ -0.95
LMNB1-203ENST00000460265 LINC00483Q53H64 154 aa9.08□□□□□ -0.96
LMNB1-203ENST00000460265 A0A1B0GU69 56 aa9.07□□□□□ -0.96
LMNB1-203ENST00000460265 SSBP3-AS1Q7Z2R9 100 aa9.06□□□□□ -0.96
LMNB1-203ENST00000460265 DNAH1Q9P2D7 4330 aa9.05□□□□□ -0.96
LMNB1-203ENST00000460265 CSAG1Q6PB30 78 aa9.04□□□□□ -0.96
LMNB1-203ENST00000460265 TYMSOSQ8TAI1 123 aa9.04□□□□□ -0.96
LMNB1-203ENST00000460265 Q96NJ1 140 aa9.04□□□□□ -0.96
LMNB1-203ENST00000460265 ACYP2P14621 99 aa9.03□□□□□ -0.96
LMNB1-203ENST00000460265 DMBT1Q9UGM3 2413 aaPredicted RBP9.01□□□□□ -0.97
LMNB1-203ENST00000460265 MIR22HGQ0VDD5 57 aa9□□□□□ -0.97
LMNB1-203ENST00000460265 IGKV2D-30A0A075B6S6 120 aa8.99□□□□□ -0.97
LMNB1-203ENST00000460265 IGKV2-30P06310 120 aa8.99□□□□□ -0.97
LMNB1-203ENST00000460265 ASB16-AS1Q495Z4 193 aa8.96□□□□□ -0.97
LMNB1-203ENST00000460265 UQCR11O14957 56 aa8.96□□□□□ -0.98
LMNB1-203ENST00000460265 FLG2Q5D862 2391 aaPredicted RBP8.95□□□□□ -0.98
LMNB1-203ENST00000460265 SPATA8Q6RVD6 105 aa8.95□□□□□ -0.98
LMNB1-203ENST00000460265 KRTAP13-2Q52LG2 175 aa8.92□□□□□ -0.98
LMNB1-203ENST00000460265 Q5W150 140 aa8.91□□□□□ -0.98
LMNB1-203ENST00000460265 VPS13DQ5THJ4 4388 aa8.91□□□□□ -0.98
LMNB1-203ENST00000460265 DNAH11Q96DT5 4516 aa8.9□□□□□ -0.98
LMNB1-203ENST00000460265 FRAS1Q86XX4 4008 aa8.88□□□□□ -0.99
LMNB1-203ENST00000460265 C9orf92A6NGG3 77 aa8.85□□□□□ -0.99
LMNB1-203ENST00000460265 LINC00304Q8N9R0 145 aa8.84□□□□□ -0.99
LMNB1-203ENST00000460265 SPINK1P00995 79 aa8.84□□□□□ -0.99
LMNB1-203ENST00000460265 FAM229AH3BQW9 127 aa8.84□□□□□ -1
LMNB1-203ENST00000460265 DNAH2Q9P225 4427 aa8.81□□□□□ -1
LMNB1-203ENST00000460265 Q6ZSA8 131 aa8.8□□□□□ -1
LMNB1-203ENST00000460265 DMAC1Q96GE9 116 aa8.79□□□□□ -1
LMNB1-203ENST00000460265 DNAH6Q9C0G6 4158 aa8.79□□□□□ -1
LMNB1-203ENST00000460265 HECTD4Q9Y4D8 3996 aa8.78□□□□□ -1
LMNB1-203ENST00000460265 DNAH17Q9UFH2 4485 aa8.75□□□□□ -1.01
LMNB1-203ENST00000460265 DNAH8Q96JB1 4490 aa8.75□□□□□ -1.01
LMNB1-203ENST00000460265 KRTAP1-4P0C5Y4 121 aa8.75□□□□□ -1.01
LMNB1-203ENST00000460265 DYNC2H1Q8NCM8 4307 aaKnown RBP8.74□□□□□ -1.01
LMNB1-203ENST00000460265 Q8N1X5 172 aa8.7□□□□□ -1.02
LMNB1-203ENST00000460265 LRP1BQ9NZR2 4599 aa8.69□□□□□ -1.02
LMNB1-203ENST00000460265 ROMO1P60602 79 aa8.67□□□□□ -1.02
LMNB1-203ENST00000460265 HYDINQ4G0P3 5121 aa8.67□□□□□ -1.02
LMNB1-203ENST00000460265 KRTAP13-3Q3SY46 172 aa8.65□□□□□ -1.02
LMNB1-203ENST00000460265 KRTAP25-1Q3LHN0 102 aa8.61□□□□□ -1.03
LMNB1-203ENST00000460265 KRTAP21-3Q3LHN1 58 aa8.59□□□□□ -1.03
LMNB1-203ENST00000460265 DNAH5Q8TE73 4624 aa8.59□□□□□ -1.03
LMNB1-203ENST00000460265 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
LMNB1-203ENST00000460265 FAT1Q14517 4588 aa8.54□□□□□ -1.04
LMNB1-203ENST00000460265 VPS13BQ7Z7G8 4022 aa8.54□□□□□ -1.04
LMNB1-203ENST00000460265 ALMS1Q8TCU4 4167 aa8.53□□□□□ -1.04
LMNB1-203ENST00000460265 PKHD1P08F94 4074 aa8.51□□□□□ -1.05
LMNB1-203ENST00000460265 KRTAP16-1A8MUX0 517 aa8.5□□□□□ -1.05
LMNB1-203ENST00000460265 A8MUU9 505 aa8.48□□□□□ -1.05
LMNB1-203ENST00000460265 Q5VSD8 79 aa8.45□□□□□ -1.06
LMNB1-203ENST00000460265 H0YAA0 97 aa8.41□□□□□ -1.06
LMNB1-203ENST00000460265 A0A1B0GVY2 172 aa8.41□□□□□ -1.06
LMNB1-203ENST00000460265 K7ERS5 55 aa8.41□□□□□ -1.06
LMNB1-203ENST00000460265 DYNC1H1Q14204 4646 aaKnown RBP8.39□□□□□ -1.07
LMNB1-203ENST00000460265 P0C880 135 aa8.39□□□□□ -1.07
LMNB1-203ENST00000460265 A0A1B0GU33 70 aa8.38□□□□□ -1.07
LMNB1-203ENST00000460265 SPINT4Q6UDR6 99 aa8.38□□□□□ -1.07
LMNB1-203ENST00000460265 FAT2Q9NYQ8 4349 aa8.35□□□□□ -1.07
LMNB1-203ENST00000460265 SACSQ9NZJ4 4579 aa8.33□□□□□ -1.08
LMNB1-203ENST00000460265 RPS29P62273 56 aaKnown RBP8.32□□□□□ -1.08
LMNB1-203ENST00000460265 PKD1P98161 4303 aa8.31□□□□□ -1.08
LMNB1-203ENST00000460265 KMT2CQ8NEZ4 4911 aaKnown RBP8.26□□□□□ -1.09
LMNB1-203ENST00000460265 H1FX-AS1Q4G0G2 97 aa8.24□□□□□ -1.09
LMNB1-203ENST00000460265 C20orf166-AS1Q96NR2 134 aa8.23□□□□□ -1.09
LMNB1-203ENST00000460265 NDUFAF8A1L188 74 aa8.22□□□□□ -1.09
LMNB1-203ENST00000460265 KRTAP10-4P60372 401 aaPredicted RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms