RNA–Protein interactions for RNA: ENST00000452067.1

NUCKS1P1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1, humanhuman

BASIC

Gene NUCKS1P1, Length 703 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1P1-201ENST00000452067 FAT2Q9NYQ8 4349 aa4.41□□□□□ -1.7
NUCKS1P1-201ENST00000452067 PKD1P98161 4303 aa4.39□□□□□ -1.71
NUCKS1P1-201ENST00000452067 FAM236AA0A1B0GUQ0 79 aa4.39□□□□□ -1.71
NUCKS1P1-201ENST00000452067 FAM236BA0A1B0GV22 79 aa4.39□□□□□ -1.71
NUCKS1P1-201ENST00000452067 ATOX1O00244 68 aa4.39□□□□□ -1.71
NUCKS1P1-201ENST00000452067 BPY2O14599 106 aa4.39□□□□□ -1.71
NUCKS1P1-201ENST00000452067 HIST1H4AP62805 103 aaKnown RBP4.39□□□□□ -1.71
NUCKS1P1-201ENST00000452067 ANAPC13Q9BS18 74 aa4.39□□□□□ -1.71
NUCKS1P1-201ENST00000452067 C9orf153Q5TBE3 101 aa4.38□□□□□ -1.71
NUCKS1P1-201ENST00000452067 SS18L2Q9UHA2 77 aa4.37□□□□□ -1.71
NUCKS1P1-201ENST00000452067 FAM229BQ4G0N7 80 aa4.36□□□□□ -1.71
NUCKS1P1-201ENST00000452067 SMIM20Q8N5G0 67 aa4.36□□□□□ -1.71
NUCKS1P1-201ENST00000452067 A0A087WSZ3 146 aa4.35□□□□□ -1.71
NUCKS1P1-201ENST00000452067 J3KT08 172 aa4.35□□□□□ -1.71
NUCKS1P1-201ENST00000452067 CD164Q04900 197 aa4.35□□□□□ -1.71
NUCKS1P1-201ENST00000452067 SSBP3-AS1Q7Z2R9 100 aa4.35□□□□□ -1.71
NUCKS1P1-201ENST00000452067 RYR2Q92736 4967 aa4.35□□□□□ -1.71
NUCKS1P1-201ENST00000452067 MOBPQ13875 183 aa4.34□□□□□ -1.71
NUCKS1P1-201ENST00000452067 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
NUCKS1P1-201ENST00000452067 A0A087WVE0 104 aa4.33□□□□□ -1.72
NUCKS1P1-201ENST00000452067 IGKV4-1P06312 121 aa4.33□□□□□ -1.72
NUCKS1P1-201ENST00000452067 SPINK6Q6UWN8 80 aa4.32□□□□□ -1.72
NUCKS1P1-201ENST00000452067 PKHD1P08F94 4074 aa4.31□□□□□ -1.72
NUCKS1P1-201ENST00000452067 SRRM2Q9UQ35 2752 aaKnown RBP4.31□□□□□ -1.72
NUCKS1P1-201ENST00000452067 UQCRQO14949 82 aa4.31□□□□□ -1.72
NUCKS1P1-201ENST00000452067 SERP2Q8N6R1 65 aa4.31□□□□□ -1.72
NUCKS1P1-201ENST00000452067 A0A0G2JQZ4 141 aa4.3□□□□□ -1.72
NUCKS1P1-201ENST00000452067 COX7CP15954 63 aa4.3□□□□□ -1.72
NUCKS1P1-201ENST00000452067 LINC00472Q9H8W2 130 aa4.3□□□□□ -1.72
NUCKS1P1-201ENST00000452067 VPS13BQ7Z7G8 4022 aa4.29□□□□□ -1.72
NUCKS1P1-201ENST00000452067 TRAV7A0A075B6U4 112 aa4.29□□□□□ -1.72
NUCKS1P1-201ENST00000452067 A8MWP4 228 aa4.29□□□□□ -1.72
NUCKS1P1-201ENST00000452067 NDUFB1O75438 58 aa4.29□□□□□ -1.72
NUCKS1P1-201ENST00000452067 ASB16-AS1Q495Z4 193 aa4.29□□□□□ -1.72
NUCKS1P1-201ENST00000452067 LRP1BQ9NZR2 4599 aa4.29□□□□□ -1.72
NUCKS1P1-201ENST00000452067 KRTAP1-4P0C5Y4 121 aa4.28□□□□□ -1.72
NUCKS1P1-201ENST00000452067 ANAPC11Q9NYG5 84 aa4.28□□□□□ -1.72
NUCKS1P1-201ENST00000452067 DYNC1H1Q14204 4646 aaKnown RBP4.28□□□□□ -1.72
NUCKS1P1-201ENST00000452067 A8MU10 97 aa4.27□□□□□ -1.73
NUCKS1P1-201ENST00000452067 HCG22E2RYF7 251 aa4.27□□□□□ -1.73
NUCKS1P1-201ENST00000452067 K7EQZ3 153 aa4.27□□□□□ -1.73
NUCKS1P1-201ENST00000452067 Q5XG85 94 aa4.27□□□□□ -1.73
NUCKS1P1-201ENST00000452067 PRR15Q8IV56 129 aa4.27□□□□□ -1.73
NUCKS1P1-201ENST00000452067 Q8N9L7 120 aa4.27□□□□□ -1.73
NUCKS1P1-201ENST00000452067 LIMD2Q9BT23 127 aa4.27□□□□□ -1.73
NUCKS1P1-201ENST00000452067 KMT2CQ8NEZ4 4911 aaKnown RBP4.27□□□□□ -1.73
NUCKS1P1-201ENST00000452067 HRCT1Q6UXD1 115 aa4.26□□□□□ -1.73
NUCKS1P1-201ENST00000452067 KRTAP4-4Q9BYR3 166 aa4.26□□□□□ -1.73
NUCKS1P1-201ENST00000452067 TYMSOSQ8TAI1 123 aa4.25□□□□□ -1.73
NUCKS1P1-201ENST00000452067 CCDC179H3BU77 68 aa4.24□□□□□ -1.73
NUCKS1P1-201ENST00000452067 RPS29P62273 56 aaKnown RBP4.24□□□□□ -1.73
NUCKS1P1-201ENST00000452067 DEFB116Q30KQ4 102 aa4.24□□□□□ -1.73
NUCKS1P1-201ENST00000452067 KRTAP13-2Q52LG2 175 aa4.24□□□□□ -1.73
NUCKS1P1-201ENST00000452067 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
NUCKS1P1-201ENST00000452067 SPAG11AQ6PDA7 123 aa4.24□□□□□ -1.73
NUCKS1P1-201ENST00000452067 Q96NJ1 140 aa4.24□□□□□ -1.73
NUCKS1P1-201ENST00000452067 OCR1Q9BZK8 76 aa4.24□□□□□ -1.73
NUCKS1P1-201ENST00000452067 APOBP04114 4563 aaKnown RBP4.24□□□□□ -1.73
NUCKS1P1-201ENST00000452067 SPINK1P00995 79 aa4.23□□□□□ -1.73
NUCKS1P1-201ENST00000452067 A0A1B0GVX0 72 aa4.22□□□□□ -1.73
NUCKS1P1-201ENST00000452067 SMR3BP02814 79 aaPredicted RBP4.22□□□□□ -1.73
NUCKS1P1-201ENST00000452067 CASC2Q6XLA1 102 aa4.22□□□□□ -1.73
NUCKS1P1-201ENST00000452067 C8orf87E5RJ46 101 aa4.21□□□□□ -1.74
NUCKS1P1-201ENST00000452067 KRTAP12-2P59991 146 aa4.21□□□□□ -1.74
NUCKS1P1-201ENST00000452067 KRTAP10-4P60372 401 aaPredicted RBP4.21□□□□□ -1.74
NUCKS1P1-201ENST00000452067 hDV103S1A0JD37 113 aa4.2□□□□□ -1.74
NUCKS1P1-201ENST00000452067 NDUFC1O43677 76 aa4.2□□□□□ -1.74
NUCKS1P1-201ENST00000452067 WFDC13Q8IUB5 93 aa4.2□□□□□ -1.74
NUCKS1P1-201ENST00000452067 LINC00304Q8N9R0 145 aa4.2□□□□□ -1.74
NUCKS1P1-201ENST00000452067 C8orf17Q9NRJ1 99 aa4.2□□□□□ -1.74
NUCKS1P1-201ENST00000452067 PKHD1L1Q86WI1 4243 aa4.2□□□□□ -1.74
NUCKS1P1-201ENST00000452067 MMP24-AS1A0A0U1RRL7 71 aa4.19□□□□□ -1.74
NUCKS1P1-201ENST00000452067 KLKP1Q107X0 134 aa4.19□□□□□ -1.74
NUCKS1P1-201ENST00000452067 C5orf47Q569G3 176 aa4.19□□□□□ -1.74
NUCKS1P1-201ENST00000452067 TP53AIP1Q9HCN2 124 aa4.19□□□□□ -1.74
NUCKS1P1-201ENST00000452067 IGHV6-1A0A0B4J1U7 121 aa4.18□□□□□ -1.74
NUCKS1P1-201ENST00000452067 H3BPC8 53 aa4.18□□□□□ -1.74
NUCKS1P1-201ENST00000452067 C20orf197Q8N268 126 aa4.18□□□□□ -1.74
NUCKS1P1-201ENST00000452067 TMEM254Q8TBM7 123 aa4.18□□□□□ -1.74
NUCKS1P1-201ENST00000452067 MP68P56378 58 aa4.17□□□□□ -1.74
NUCKS1P1-201ENST00000452067 TMEM258P61165 79 aa4.17□□□□□ -1.74
NUCKS1P1-201ENST00000452067 C1orf195Q5TG92 126 aa4.17□□□□□ -1.74
NUCKS1P1-201ENST00000452067 Q5VSD8 79 aa4.16□□□□□ -1.74
NUCKS1P1-201ENST00000452067 MRPL34Q9BQ48 92 aaKnown RBP4.16□□□□□ -1.74
NUCKS1P1-201ENST00000452067 RYR3Q15413 4870 aa4.16□□□□□ -1.74
NUCKS1P1-201ENST00000452067 A0A0U1RQV1 116 aa4.14□□□□□ -1.75
NUCKS1P1-201ENST00000452067 ATP5EP56381 51 aaPredicted RBP4.14□□□□□ -1.75
NUCKS1P1-201ENST00000452067 LINC00313P59037 77 aa4.14□□□□□ -1.75
NUCKS1P1-201ENST00000452067 TRAV22A0A0B4J277 110 aa4.13□□□□□ -1.75
NUCKS1P1-201ENST00000452067 RYR1P21817 5038 aa4.13□□□□□ -1.75
NUCKS1P1-201ENST00000452067 FAT1Q14517 4588 aa4.12□□□□□ -1.75
NUCKS1P1-201ENST00000452067 H0Y9P7 68 aa4.12□□□□□ -1.75
NUCKS1P1-201ENST00000452067 NDUFS5O43920 106 aa4.12□□□□□ -1.75
NUCKS1P1-201ENST00000452067 SNURFQ9Y675 71 aa4.12□□□□□ -1.75
NUCKS1P1-201ENST00000452067 HSPG2P98160 4391 aa4.12□□□□□ -1.75
NUCKS1P1-201ENST00000452067 H7BZZ5 65 aa4.11□□□□□ -1.75
NUCKS1P1-201ENST00000452067 ZCCHC13Q8WW36 166 aaKnown RBP4.1□□□□□ -1.75
NUCKS1P1-201ENST00000452067 FAM236DA0A1B0GTK5 79 aa4.09□□□□□ -1.75
NUCKS1P1-201ENST00000452067 FAM236CP0DP71 79 aa4.09□□□□□ -1.75
NUCKS1P1-201ENST00000452067 CYSTM1Q9H1C7 97 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms